Sandaracinobacteroides saxicola: H3309_11510
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Entry
H3309_11510 CDS
T06739
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sand
Sandaracinobacteroides saxicola
Brite
KEGG Orthology (KO) [BR:
sand00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sand03032
]
H3309_11510
03400 DNA repair and recombination proteins [BR:
sand03400
]
H3309_11510
Enzymes [BR:
sand01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H3309_11510
DNA replication proteins [BR:
sand03032
]
Prokaryotic type
DNA Topoisomerases
H3309_11510
DNA repair and recombination proteins [BR:
sand03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H3309_11510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QMW21998
UniProt:
A0A7G5IF56
LinkDB
All DBs
Position
2290177..2291178
Genome browser
AA seq
333 aa
AA seq
DB search
MASLPDAEPALHFSDLDAPGFTRVRRGSGFHYRDAAGRPVRCRETIARLNSVALPPAYRD
AWYCADPDGHIQAVGIDARGRRQYRYHPAFRARQELSKFEACVAFGEALPRVRRAVAQAL
ETRGLDPARVIAAVVRLLDLGRIRVGNERYARDNRTHGATTLRGRHAAVKGARVRLRFRG
KHGIEREVVLSDRALASTVRRCQELPGQHLFACETGDGVRAVTSADVNAWLQGVAGAGVT
AKAFRTWWASTLALAAGQRGAGLREALDMVAAELGNTPAMARKSYVHPAVVGWLREGAPA
LRRQRATRWMSADERTLLAFLSKPVNGTLSEPV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggccagcctgcccgatgccgagcccgcgctgcatttctccgacctcgatgcccccggt
ttcacgcgggtgcggcggggcagcggttttcactatcgcgatgccgcgggccggccggtg
cgctgccgggagacgatcgcgcggctgaattccgtggcgctgccgccggcctatcgcgac
gcctggtattgcgccgatcccgacgggcatattcaggcggtgggcatcgatgcgcgcggc
cggcggcaatatcgctatcaccccgcctttcgcgcccggcaggagctgagcaagttcgag
gcctgtgtggcgttcggggaggcgctgccgcgtgttcgccgcgccgttgcccaggcgctg
gagacgcgcgggctggacccggcgcgggtgatcgcggcggtggtgcggctgctcgacctc
ggccggattcgcgtgggaaacgagcgctatgcccgcgacaaccgcacgcatggcgcgacc
acgctgcgcgggcggcatgccgcggtgaagggcgcgcgggtgcggctgcggtttcgcggc
aagcatgggatcgagcgggaggtggtgctgagcgatcgcgcgctggcgtccacggtgcgc
cgctgtcaggagctgccggggcagcatctgttcgcctgcgagaccggtgacggcgtgcgc
gcggtcacctcggccgatgtcaatgcctggttgcagggtgtcgccggcgccggggtgacg
gcgaaggcgttccgcacctggtgggcgagcacgctggcgctggcggcggggcagcgcggc
gcgggcctgcgcgaggcactggacatggttgccgccgaactggggaacaccccggcgatg
gcgcgcaaaagctatgtccaccccgcggtggtcggctggctgcgcgagggcgcgccggcg
ctccgccggcagcgcgcgacacggtggatgagcgccgacgagcgcacgctgctggccttc
ctgtccaagccggtcaacggcaccctatcagaacctgtttga
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