Sandaracinobacteroides saxicola: H3309_13840
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Entry
H3309_13840 CDS
T06739
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sand
Sandaracinobacteroides saxicola
Brite
KEGG Orthology (KO) [BR:
sand00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sand01011
]
H3309_13840
Enzymes [BR:
sand01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
H3309_13840
Peptidoglycan biosynthesis and degradation proteins [BR:
sand01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
H3309_13840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
QMW22412
UniProt:
A0A7G5IGC0
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All DBs
Position
2748686..2750527
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AA seq
613 aa
AA seq
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MIRALLLSLLLATAADAAPRAMLLSAAESATRLGVDDSVTGVPGLPLRAAERKVPAQLTP
AQRFQYRRLFLDIDAGRFSAARAALAAMPQGPLHAAAQAQILLGLGAGAGQTALIDWLNA
NPAAPQASAIAALARRAGAAELPALASRRQLVPVRLTPSLGPRSARGDLPGDATFAASAR
ALLAADRIAELETALEAHAGTLSSGVAAEWAQRAAWDRYLDGDDAAAMRLGDRAAAGTGD
WAVMGNWVAGLAAFRQNDCEGSARRFDAIGRQFASADMASAAAYWAARSHLRCGRPDQSA
ARLAIAARDTTGFYGLLATRALGIEPRLDWREPDFINADWNHLSDLPGARRAAALVEIGQ
LGLADRELRQLAMISPPATYEPLLRLAARLDLPATQYWLAQNPPPGQMAPLSARLPAPDW
RPFGGWRVDRNLVFAHALQESGFIMSATSRTGARGALQLMPGTARDMARAAEMQHDETML
TDPSFNVEYGQRFLELLRDTPQTQGLLPKAIAAYNAGHGNVGKWNQGGVRDNGDVLLFIE
SIPFRETRHYVEVVFRNYWLYSIRATGKAPSLDAIAANLWPTFPGRPGPAAVATPPVVVN
ALSLTTTVASATP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgcgctccttctctcccttctgctggccaccgccgccgacgcggcgccgcgc
gccatgctgctcagcgccgcggaaagtgccacccgtcttggcgtggacgacagcgtcacg
ggcgtgcccggcctgccgctgcgcgccgccgagcggaaggtgccggcccagctgacgccg
gcgcagcgcttccagtatcgccgcctcttccttgatatcgatgccggccgtttcagcgcg
gcccgcgcggcgctggctgccatgccgcaaggtccgctgcatgccgcggcgcaggcgcag
atcctgctgggcctgggcgcgggtgccggccagaccgccctcatcgactggttgaacgcc
aaccccgccgcgccgcaggcgtccgccattgccgcgcttgcccgtcgtgccggtgccgcc
gagctgccggcgctcgccagccgccgacagctcgtgccggtccggctgacgccctcgctt
ggcccgcgcagtgccaggggcgacctgccgggcgacgccaccttcgccgccagcgcgcgc
gcgctgctggcggccgaccgcatcgccgagctcgaaaccgcgctcgaagcgcatgccggc
acgctcagcagcggtgtcgccgccgaatgggcacagcgtgccgcctgggaccgctacctc
gacggcgatgatgccgccgccatgcgcctgggcgaccgcgccgccgccggcaccggcgat
tgggccgtcatgggcaactgggtcgccggcctcgccgccttccgccagaatgattgcgag
ggctctgcacgccgcttcgacgccatcggccgtcagttcgcctccgccgacatggcgtcc
gccgccgcctattgggccgcccgcagccatttgcgctgcggtcgccccgaccagtccgcc
gcccgccttgccatcgccgcgcgcgacaccaccggcttctacggcctgctcgccacccgc
gcgctgggcatcgaaccgcggctggattggcgcgaacccgatttcatcaatgccgactgg
aaccatctttccgacctgcccggcgcgcggcgcgccgccgcgctggtggagatcggccag
ctcggccttgccgaccgcgagctgcgccagctcgcgatgatcagtccgcccgccacctat
gagccgctgctgcgccttgccgcccgcctcgacctgcccgccacccaatattggctggcg
cagaacccgccgccggggcagatggcgccgctcagcgcccggctccccgcgccggactgg
cggcccttcggcggctggcgcgtggaccgcaacctggtgttcgcccatgcgcttcaggaa
tcgggcttcatcatgtcggcgaccagccgcaccggtgcccgcggcgcgctgcaactgatg
cccggcaccgcgcgggacatggcgcgcgccgccgagatgcagcatgacgagaccatgctg
accgacccgtccttcaacgtcgaatatggccagcgcttcctggaactgttgcgcgacacg
ccccagacacagggcctgctgcccaaggcgatcgccgcctacaacgccgggcatggcaat
gtcggcaaatggaatcagggtggcgtgcgcgacaatggcgacgtgctgctgttcatcgag
agcatcccgttccgcgagacgcgccactatgtcgaggttgtgttccgcaactactggctc
tactcgatccgcgccaccggcaaggcgccgagcctggacgccatcgccgccaacctgtgg
ccgaccttccccggccgaccgggccccgccgccgtcgccacgccgccggtggtggtcaac
gcgttgtcgctaaccaccaccgtcgcatccgccaccccttga
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