Sandaracinobacteroides saxicola: H3309_16780
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Entry
H3309_16780 CDS
T06739
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sand
Sandaracinobacteroides saxicola
Pathway
sand03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sand00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H3309_16780 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sand03400
]
H3309_16780 (mutM)
Enzymes [BR:
sand01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
H3309_16780 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H3309_16780 (mutM)
DNA repair and recombination proteins [BR:
sand03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H3309_16780 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QMW22921
UniProt:
A0A7G5IHS9
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All DBs
Position
3340053..3340862
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AA seq
269 aa
AA seq
DB search
MPELPEVETVVRGLAPHLLGRRLTSVIAHRPDLRWPLPADLGQRLTGATVTTLSRRAKYG
LIGTDRGDTLIFHLGMSGSMRVNPAADPHNHIIFATEGGSIAFHDPRRFGSLHLVATADA
PAHPLLAGLGPEPLSDAFTADHLIARARDRQTPMKAFLLDQKTVAGLGNIYVAEALFAAG
IAPARRAGHVAPTRLARLVPAIQQVLAAAIDAGGSSLRDHARVSGELGYFQHSFRVYGRE
GEPCPACATPIRRAVQSARSSFHCPRCQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttcccgaagtcgaaaccgtcgtccgtggccttgccccgcacctgctcggc
cggcgcctcacctcggtcatcgcgcaccgccccgacctgcgctggcccctgcccgccgat
ctcggccagcggctgaccggcgccaccgtcaccacgctctcccgtcgcgccaaatatggc
ctgatcggcaccgaccgcggcgacaccctcatcttccaccttggcatgtccggctcgatg
cgcgtcaatcccgccgccgacccccacaatcacatcatcttcgccaccgagggcggcagc
atcgccttccacgacccgcgccgcttcggctcgctgcacctggtggcgaccgccgacgcc
ccggcgcacccgctgctcgccgggctcgggccggagccgctgtccgacgccttcaccgcc
gaccatctgatcgcccgcgcccgcgaccgccagacgccgatgaaggccttcctgctggac
cagaagacggtcgccggcctgggcaacatctatgtcgccgaggcgctgttcgccgccggc
atcgcgcccgcgcgccgcgccggccatgtcgcgccgacgcgcctcgcccgcctggtgccc
gccattcagcaggtgctcgccgccgccatcgatgccggcggctcctcgctgcgcgaccat
gcccgggtgtcgggcgaactcggctatttccagcacagcttccgcgtctatggccgggag
ggcgaaccctgccccgcctgcgccaccccgatccggcgcgccgttcagtccgcgcgctcc
agcttccactgcccgcgctgccagcgctga
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