Streptococcus anginosus C1051: SAIN_0187
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Entry
SAIN_0187 CDS
T02828
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sang
Streptococcus anginosus C1051
Pathway
sang03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sang00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAIN_0187 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sang03021
]
SAIN_0187 (rpoC)
03400 DNA repair and recombination proteins [BR:
sang03400
]
SAIN_0187 (rpoC)
Enzymes [BR:
sang01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAIN_0187 (rpoC)
Transcription machinery [BR:
sang03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAIN_0187 (rpoC)
DNA repair and recombination proteins [BR:
sang03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAIN_0187 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AGU80955
LinkDB
All DBs
Position
184678..188316
Genome browser
AA seq
1212 aa
AA seq
DB search
MVDVNRFQSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIICDRCGVEVTRTKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEHKSIMTEREYRERLREYGQGSFVAKMGAEAIQDLL
KQVDLEKEIAELKDELKTATGQKRVKAIRRLDVLDAFQKSGNKPEWMVLNILPVIPPDLR
PMLQLDGGRFASSDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVARDIVQNVKAAKRLVERNDERIWDILEDVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARILMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEEAGREGEGMVFKDRDEAVMALRNGYVHLHTRVGI
ATDSLNKPWTENQKHKILLTTVGKILFNDIMPDELPYLQEPNASNMAEGVPAKYFLESGQ
DVKEAISKLELNVPFKKKNLGNIIAEIFKRFRTTETSAFLDRLKDLGYHHSTLAGLTVGI
ADIPVVEDKAEIIEESHKRVEQITKQFRRGMITDDERYNAVTAEWRAAREKLEKRLVANQ
DSKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLVIRSITDGKEMIEPLE
ERLIGRYTKKSVKHPETGEVIVGPDVLITEDMAHEIVSAGVEEVTIRSVFTCNTRHGVCR
RCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRVQEI
FEARNPKGEAVITEVKGEVTAIEEDASTRTKKVFVKGATGEGEYVVPFTARMKVAVGDQV
SRGAALTEGSIQPKHLLAVRDVLSVETYLLAEVQKVYRSQGVEIGDKHIEVMVRQMIRKV
RIMDPGDTDLLMGTLMDITDFTDANRDVVISGGVPATARPVLMGITKASLETNSFLSAAS
FQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNLEPQAVNEVEIIEDTT
VTEPVEETTPVE
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
gtggttgatgtaaatcgttttcaaagtatgcaaatcaccctagcttctcctagtaaagtc
cgctcttggtcttatggagaagtgaagaaacctgaaacaattaactaccgcacactaaaa
ccagaacgcgaaggactttttgatgaagtcatctttggtcctacgaaagactgggaatgt
gcatgtggaaaatataaacggattcgctataaaggaatcatttgtgatcgttgtggtgtt
gaagtaactcgtaccaaagttcgtcgtgaacgtatgggacatattgagttgaaagcacct
gtctctcatatttggtattttaaaggaatcccaagccgaatgggcttgaccttggacatg
agccctcgtgctcttgaagaagtcatctattttgcagcttatgtggtgattgatccaaaa
gatacgccacttgagcataaatccattatgacagagcgggaatatcgtgaacgcttacga
gaatatggtcaaggttcctttgttgcaaaaatgggtgctgaagcaattcaagatctcttg
aaacaagtagatttggaaaaagaaattgcagagctcaaagatgaattaaaaacggcaact
ggtcaaaaacgtgtcaaggctattcgtcgtttggatgttttagatgccttccaaaaatct
ggtaacaagccagaatggatggtcttaaacatcttgccagttattccgccagacttacgt
ccaatgcttcagttggacggtggacgttttgcctcttctgacctcaatgatctctaccgt
cgtgttatcaatcggaataatcgtttggcacgtcttttggaactaaatgctcctggaatc
atcgtgcaaaatgaaaagcggatgttgcaagaagcggttgatgctttgattgacaatggt
cgtcgtggtcgtcctattactggaccaggaagccgtccgctcaaatcattgagccacatg
ctcaaagggaaacaaggacgttttcgtcaaaacttgctcggaaaacgggttgacttctca
ggacgttcggttattgcggtaggtccgacactcaagatgtaccaatgtggtgtgccacgt
gaaatggctattgaactcttcaaaccatttgtcatgcgtgaaattgtcgcgcgtgatatt
gtgcaaaatgtcaaagctgctaaacgcttggtggaacggaatgatgaacgcatctgggat
attttagaagatgtgattaaagaacacccagtgctccttaaccgcgcaccgacacttcac
agattagggattcaggcttttgagccagtcttgattgacgggaaggctcttcgtttgcac
ccacttgtgtgtgaggcttataatgccgactttgacggagaccaaatggctatccatgtg
cccttgtcagaagaagctcaagcagaagcacggattctcatgctggcagccgaacacatc
ctcaatccaaaagacggtaagccagtagtaaccccttcacaagatatggtcttggggaac
tactacctgactatggaagaagctggtcgtgaaggagaaggaatggtctttaaagaccgt
gatgaagctgtaatggctctccgtaatggctatgttcacttacatacgcgtgttgggatt
gcaacggatagtttaaacaaaccatggacagaaaatcaaaaacacaagatcctcttgaca
acagtgggtaagattctttttaatgatatcatgccagatgaattgccatatttgcaagag
ccaaatgcttcaaacatggcagaaggtgtgccagctaagtatttcttagaatctggtcaa
gatgtcaaagaagctatcagtaagctagaattaaatgtaccattcaagaagaaaaatctt
ggaaatatcattgctgaaatcttcaaacgtttccgtacaactgaaacatctgctttcctt
gaccgtctgaaggatctcggctatcatcattcaacgttagcaggcttgacagtagggatt
gctgatattccggtcgttgaagataaggcagaaattatcgaagagtctcacaaacgtgtg
gaacaaatcaccaaacaattccgccgtggtatgattacagacgatgaacgctacaatgca
gttactgctgaatggcgtgcagctcgtgaaaaattggaaaaacgtttggttgccaaccaa
gattctaagaacccaatcgttatgatgatggactctggagcccgtggtaacatttctaac
ttctcacaacttgctggtatgcgtggtttgatggccgctcctaatggccgcatcatggaa
ttgcctattctatctaacttccgtgaaggtttgtctgttttggaaatgttcttctctact
cacggtgctcgtaaagggatgactgatacagcccttaaaacagctgactcaggttatctg
actcgccgtttggttgatgtggcgcaagatgtgattatccgtgaagatgactgtggaacc
gatcgtggtcttgttatccgctcaattactgatggtaaagaaatgattgagccattagaa
gaacgcttgattggtcgttatacgaagaaatctgttaaacatcctgaaacaggcgaagtc
atcgttggtccagacgtattgattacagaagatatggcgcatgagattgttagcgctggt
gtcgaagaagtcactattcgctctgtctttacatgtaatacacgtcatggagtttgccgt
cgttgttacggtatcaacttggcaacgggtgatgcggttgaagtcggtgaggcagtcgga
acgattgctgcccaatctatcggtgaacctggtacacagcttacaatgcgtactttccac
acgggtggtgttgcctctaataccgatatcacacaaggtcttcctcgtgtccaagaaatc
tttgaagcccgcaatccgaaaggggaagcagttattactgaagttaaaggcgaagtgact
gcaattgaagaagatgcttctactcggactaagaaagtctttgtcaagggtgcaaccggt
gaaggagaatacgttgtaccatttacagctcgtatgaaagtggctgtaggtgaccaagtt
tctcgcggggcagcattaacagaaggttctatccaaccgaaacatttattggctgttcgt
gatgtcttgtctgttgagacttacctgctagctgaagtgcaaaaagtttaccgcagtcaa
ggggtagaaatcggtgacaagcatattgaagtaatggttcgccaaatgattcgtaaggtg
cgcatcatggatccgggagatactgatcttcttatgggcacactcatggatattacagac
tttaccgatgctaaccgagatgtagttatctcaggcggtgttcctgcgactgctcgccca
gtcctcatgggaattactaaagcatctcttgaaacaaatagtttcttgtcagctgcttcc
ttccaagaaaccactcgtgtcctcacagacgcggctatccgtggtaagaaagaccacttg
cttggtctcaaggaaaatgttatcattggtaaaatcatcccagctggtacaggtatggct
cgttaccgtaaccttgaaccgcaagctgtcaatgaagtcgaaattatcgaagatacaacc
gtaacagaacctgtggaagaaactactccagtagaataa
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integrated database retrieval system
