Streptococcus anginosus C1051: SAIN_0342
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Entry
SAIN_0342 CDS
T02828
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sang
Streptococcus anginosus C1051
Brite
KEGG Orthology (KO) [BR:
sang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sang03019
]
SAIN_0342
03009 Ribosome biogenesis [BR:
sang03009
]
SAIN_0342
Enzymes [BR:
sang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAIN_0342
Messenger RNA biogenesis [BR:
sang03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAIN_0342
Ribosome biogenesis [BR:
sang03009
]
Prokaryotic type
rRNA helicases
SAIN_0342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AGU81099
LinkDB
All DBs
Position
343715..345058
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AA seq
447 aa
AA seq
DB search
MKFTEFKFKDYIQEALKDLNFVEATEVQEKLIPVVLAGRDLVGESKTGSGKTHTFLLPIF
QKLNEDADSVQVVITAPSRELARQIYQAARQIAAFSDKEIRVANYVGGTDKNRQIGKLSS
SQPHIVIGTPGRIYDLVESGDLAIHKANTFVVDEADMTLDMGFLETVDKIASSLPKDLQF
LVFSATIPQKLQPFLKKYLSNPVIEQIKTKTVISDTIENWLISTKGRDKNAQIYEITQLL
QPYLAMIFVNTKTRADELHSYLTAQGLKVAKIHGDIAPRERKRIMNQVKNLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLPGTAITLYQPSDDSDIRELEKM
GIHFIPKMIKNGEFQDTYDRDRRANREKTQEKLDTEMIGLVKKKKKKIKPGYKKKIQWAV
NEKRRKTKRAENRARGRAERKAKRQSF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagaatttaagtttaaagattacattcaagaggcacttaaagatttgaac
tttgttgaggcgacagaagtccaggaaaaactcattccggttgtgcttgctggtcgtgac
ttggtgggagagtccaaaacaggttcagggaaaacacacactttcttgctgccgattttt
caaaagctgaatgaagatgcagatagtgttcaggtcgttattaccgctcctagtcgtgag
ttggctaggcagatttatcaggctgcacgccaaattgctgctttttctgataaggaaatt
cgagttgctaactatgtcggtgggacggataaaaatcgtcagattgggaaattgagttcc
agtcaaccacatattgtcattggcacaccaggacgcatttatgatttggtcgaatcaggt
gacttagccattcataaggcgaatacctttgtcgttgatgaagcagatatgaccttggat
atgggctttttagaaacagtggataagattgcgtccagtttgccgaaggatttgcaattt
ctagtcttttctgcgaccattccgcaaaaattgcagccatttttaaaaaaatatctatcc
aacccggtcattgagcaaatcaaaaccaaaacggttatttcagatactattgaaaattgg
ctgatttcaacaaaaggacgtgataagaatgcgcagatttatgaaatcacacagctccta
cagccttatctagctatgatttttgtcaatactaagacacgagcggatgaattgcatagc
tatttgacagcgcaaggtctcaaggtggcaaagattcatggggatattgcaccgcgggag
cgaaaacggattatgaatcaggtgaagaacctagattttgaatacattgttgcgacagat
ttagctgcgcggggaattgatattgaaggcgttagtcatgtcatcaatgatgcgattccg
caagatttgtccttcttcgttcaccgagtgggacgaactggcagaaatggactgccaggt
acggctattacactttatcaaccgagcgatgattcagatattcgtgagctggagaaaatg
ggtatccacttcattcccaagatgattaaaaacggagaatttcaagatacctatgaccgc
gatcgccgtgccaatcgtgaaaaaacacaggaaaaattggacacggaaatgattggtctg
gttaaaaagaaaaagaagaaaatcaaaccgggctataagaaaaaaatccagtgggctgtc
aatgaaaaacgccgtaagacaaaaagagctgaaaatcgcgcacgcggtcgtgcagaaaga
aaagcgaaacgtcaaagtttttag
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