Streptococcus anginosus C1051: SAIN_0395
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Entry
SAIN_0395 CDS
T02828
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sang
Streptococcus anginosus C1051
Pathway
sang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAIN_0395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sang03019
]
SAIN_0395
Messenger RNA biogenesis [BR:
sang03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAIN_0395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
LMBR1
Motif
Other DBs
NCBI-ProteinID:
AGU81151
LinkDB
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Position
404296..405903
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AA seq
535 aa
AA seq
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MEMIFAGVFAVIIGLVIGYVSITVRMKSAKEAAELTLLNAEQEATNLRGQAEREADLLLK
EVKRESKSLKKEALLEAKEEARKYREEVEAEFKSDRQELKQLESRLTERATSLDRKDDNL
TNKEKTLEQKEQSISDRNKNLEARENKLTELEQHKEAELERVASLSQTEARDIILTQTED
KLSKEIATRIREAEQEVKERSDKMAKDILVQAMQRIAGDYVAEQTNSTVHLPDDTMKGRI
IGREGRNIRTFESLTGIDVIIDDTPEVVTLSGFDPIRREIARMTMEALLKDGRIHPARIE
ELVEKNRLEIDHKIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSVEVAK
LSGVIASELGENANLARRAGFLHDIGKAIDREVEGSHVEIGTELARKYKEHPIVVNTIAS
HHGDVEPESVIAVIVAAADALSAARPGARSESLESYIKRLQDLEEIANSFEGVKNSFALQ
AGREIRIMVNPGQIKDDKITILAHDVREKIENNLEYPGNIKVTVIREMRAVDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgatttttgcaggtgtttttgccgtcatcattggtttagtcattggatatgta
agtatcacagttcgcatgaaatctgcgaaagaagctgcggaacttactcttttaaatgct
gaacaagaagcaactaatttacgtggacaagctgagcgcgaagcggatttgttattaaaa
gaagtgaagcgcgaaagtaaatcccttaaaaaagaagcactgttagaggcaaaagaagaa
gccagaaaatatcgagaagaagttgaggcagaatttaaatctgatcgtcaagaattgaag
caattggaaagtcgtttgacagaacgtgcgacaagtcttgatcgtaaagatgacaatttg
accaacaaagaaaaaacactcgagcagaaagaacaaagtatttctgatagaaacaaaaac
cttgaggcgcgtgaaaacaaactgacagagttggagcagcacaaagaagcagaattagag
cgtgttgcttcactttcacaaactgaagccagagatatcattctcactcagactgaggat
aagttatcaaaggaaattgcgacgcgtattcgtgaagcagagcaagaagtcaaagaacgt
tctgataaaatggcaaaggatattttagtccaagccatgcaacggattgcaggtgactat
gttgcggagcaaaccaattcaacagttcatctgccggatgatacgatgaagggtcgcatt
attggacgtgaaggtcggaatattcgaacctttgaaagtttaacgggtattgatgtcatt
attgatgacacaccagaagtggtgactttatctggttttgatcctattcgacgtgaaatt
gcacgcatgacaatggaagccttgttgaaagacggtcgtatccacccagctcgcattgaa
gaattagtagagaaaaatcgtctggaaattgatcataagattcgtgaatatggtgaagca
gcagcttatgaaatcggtgcaccaaacttacatccggatttgatgaagattatgggacgc
ttgcaattccgtacgtcatatgggcaaaatgtattgcgtcattctgttgaagttgctaag
ttgtctggtgttattgcgagtgaactcggtgaaaatgctaacttagctcgccgtgcaggc
ttccttcacgatattggaaaggctattgaccgtgaagtggaaggtagccacgtggagatt
ggaacagaattggctcgtaagtataaggaacatccaattgtggtcaatacaattgccagt
catcatggtgatgtagaacctgaaagtgtgattgcagttattgttgcagcagctgatgcg
cttagtgcggctcgtccaggtgctcgcagtgaatcccttgaaagctatatcaagcgcctg
caagatttggaagaaattgccaatagttttgaaggtgtgaaaaatagttttgccttacaa
gcggggcgtgagattcggattatggtcaaccctggtcagattaaagatgataagattact
attttggctcatgatgtgcgtgaaaagattgagaacaacctcgaatatccaggaaatatc
aaagtaacggttattcgggaaatgcgtgctgtggattatgcgaaatag
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