Streptococcus anginosus C1051: SAIN_0907
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Entry
SAIN_0907 CDS
T02828
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sang
Streptococcus anginosus C1051
Pathway
sang02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sang00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SAIN_0907 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sang03021
]
SAIN_0907 (rpoD)
Transcription machinery [BR:
sang03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAIN_0907 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DprA_WH
DUF2316
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
AGU81651
LinkDB
All DBs
Position
949848..950960
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AA seq
370 aa
AA seq
DB search
MATKQKEVTTFDVQVAEFIRNHKKTGTATDDEINDRLVIPFTLEADGIEDLLQRIQDAGI
AITDKEGNPSERVLNTEEEEAELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQE
LAVLVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYTK
GFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQ
LDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSR
SKPLRDFIED
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaaacaaaaagaagtaacaacttttgatgttcaagttgcagaatttattcgc
aaccataaaaaaactggtacagcaaccgatgatgaaatcaatgatcggctagtcattcca
tttactttggaagctgatggcattgaagatcttcttcaacggattcaggacgcagggatt
gctattacggataaagagggcaacccaagtgaacgggttttaaatacagaggaagaagaa
gctgaattaacagatgaggagttgcttggtagcaattctgctaaagtgaacgaccctgtc
cgtatgtatttaaaggaaattggtgttgttccgttattgaccaatgaagaagagcaagaa
ttagctgttcttgtggagcaaggcgacttagaagcgaaacaacgtttggcagaagctaat
ttgcggttggttgtctctattgctaagcgctatgttggacgcggcatgcagtttcttgac
ttgattcaagaaggcaatatgggattgatgaaagccgttgacaagtttgactataccaaa
ggtttcaaattttcgacctatgccacttggtggattcgtcaagcgattactcgtgcgatt
gctgaccaagcgcgtacgattcggattccggttcacatggttgagacaatcaataaatta
gtgcgggagcaacgaaatcttttgcaagaattgggacaagatccaacgccagaacaaatt
gctgagcgcatggatatgacaccagataaagttcgtgaaattttgaagattgcccaggag
ccggtctctcttgaaactccaattggagaagaagatgatagtcatcttggcgatttcatt
gaggatgaagtgattgaaaatccagttgattacacaacacgtattgtcctacgtgagcaa
ttagacgaggttcttgatacattaacagaccgtgaagaaaatgtactacgtttgcgtttc
ggtctagatgatggtaaaatgcgtacgctggaagatgttggaaaagtctttaacgtgact
cgtgaacggattcgacaaattgaggccaaagccctacgcaaattgcgtcatccaagtcgt
agcaagccacttcgtgactttattgaagattag
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integrated database retrieval system
