Sinocyclocheilus anshuiensis: 107653512
Help
Entry
107653512 CDS
T04917
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33-like
KO
K15542
polyadenylation factor subunit 2
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107653512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107653512
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107653512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_Vps41
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_DCAF4
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
107653512
NCBI-ProteinID:
XP_016295734
UniProt:
A0A671RKJ3
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MATDIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRYLENRLWQRDHRDFRAIQPDAGCYNDLVPPVGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
AGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDMETNSVAAIPGMGIPEQLKAAMEQEQTGKEMVAEPEMSIPGLDWGMEE
VMLKDQKKPPTKKVPYAKPIPAQFQQAWAENKVPTMPPGEVPKERKDEKTVDGKKKTQAE
IEQEMATLQYTNPMLLEQLKIERMAQLQEQGMPPPAGQSGPMPPFPGQGGPMPPPTQGFP
QSMPPQQMPHNMPPMGPGGMPGPFIPPGQMGPPGPPMHQGPPPQGMMGPDMHGPPRHPGA
HRNMGPQGPPGMPPGTRGMQGPPPTGMPPGSGGPPAGMMGPPPRGQGPPQGGMMHQDMRG
PVPHGNMMGPQGPMPGSMMGPPPRAHGNMQGMGNMHGMGPPPGGMHGPPNNMQGPPGNMQ
GAPPYMQGKPPNMGEGNRGQFNQGQNPGPQSMMHGIGQQGPNGKGDGPRGPPNHHMGPPP
ERQGPGQGSDGGQYWGDDGGYQEGWRRGPGGPGQEYSVGHRGISGGQWEGQERFSSHDGE
YMGHDRYDGYEDSGEEFDQRQRRPSHGDDSYRRGGPSGRGGMGGYQDEYGGDESFDSQED
VGQGWRGRGRPRGGPPRGGGVGRKGLLPTPDDYPCHYEGGRNQEGWEGGRDSGHESYRDG
QQPDHNMHDSPSPASRERSSSLQGMDMASLPPRKRPWHDGPGTGDMDSPGAGPDDRGAGR
PPPRDEGGYGPPSRGGRGGWGRGGPPNPGGPGPNVGPNTRRGAPRGVMRGGRGR
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagatattggctcacctccccggttcttccatatgcctcggttccagcaccag
gcacctcgtcagctgttctacaagaggccggactttgcccagcagcaggctatgcagcag
ctcactttcgatggcaagcgcatgaggaaagctgtgaaccgcaagaccattgattacaat
ccatctgtcatcagatatcttgagaatcgattgtggcaacgagatcatcgagatttccgt
gctattcaaccagatgcaggctgctacaatgatcttgttcctccagttggtatgcttaat
aaccctatgaatgctgttacaacaaagtttgtcagaacctcgaccaacaaagtcaaatgc
cctgtgtttgttgtgcggtggactcctgaaggcaggcgacttgtaacgggtgcctccagt
ggggagtttactttatggaatgggctcacatttaacttcgagacaattcttcaggctcat
gatagccctgtcagggcaatgacctggtctcacaatgacatgtggatgttgactgccgac
catggaggttacgtgaagtactggcagtccaacatgaataacgtcaagatgttccaggct
cacaaggaggcgattagagaggccagtttctctcctacggataataaatttgccacttgc
tctgatgatggaactgtacgcatctgggactttctccgctgtcatgaggaaagaattctg
agaggtcacggagcagatgtgaagtgtgtcgattggcatcccacgaagggcttggtggtg
tctggcagcaaagacagccagcaacctatcaaattttgggacccaaagactggacaaagt
ttggcaacactacatgctcataaaaacacagtcatggaggtgaagtggaaccttaatggc
aactggctgttgacggcatcacgtgaccatttatgcaaactgtttgacattcgcaacctc
aaagaggagctgcaggtttttagaggacataagaaagaagccacagctgtagcttggcac
ccagttcatgaaggcttgtttgccagtggaggctctgatggatcactgctattttggcat
gcaggagtggagaaagaggtgggaggaatggagatggctcatgaaggaatgatctggagt
ttagcatggcatccactgggccacatcttgtgttctgggtctaatgaccataccagcaaa
ttttggacaagaaatcgtccgggggacaagatgcgggacagatacaatctaaacttgttg
cctggaatgtcagaagatggagtggagtatgatgacatggagaccaatagtgttgcagcc
attcctggtatggggatcccagaacaactgaaggctgccatggaacaagaacaaactggc
aaagagatggtggcagagcctgagatgagcattccagggctggactggggaatggaagag
gtcatgctgaaggaccaaaaaaagcccccaactaaaaaggttccttatgcaaagccaatt
ccagctcagtttcaacaggcctgggcagagaataaggttccaacgatgcctcctggagag
gttccaaaggaaaggaaggatgagaagacagtagatggcaaaaagaagacccaagcagag
attgagcaggaaatggctaccctgcagtatacaaatccaatgttgctcgagcaactgaag
attgagcgaatggcacagttacaagagcagggaatgcctccccctgctggacagtcaggg
ccaatgccaccctttccagggcagggtggtccgatgccccctccaacacaaggcttccct
cagtccatgcctccacaacagatgccgcacaacatgcctccaatgggaccaggtggaatg
cctggtcctttcatacctccaggccagatgggtccaccaggacctcccatgcaccagggt
ccccctcctcagggcatgatgggtccagacatgcatggacctccacgtcatccaggcgct
cacaggaacatgggtccccagggtcctcctggcatgccacctggcaccagaggcatgcaa
ggacctcccccaacaggaatgcccccaggttctggtggacctccagctggtatgatggga
ccaccaccacgaggacaagggccaccacagggaggtatgatgcatcaggacatgaggggg
cctgtgcctcatggaaacatgatgggccctcagggacccatgccagggagtatgatggga
cctccacccagggcgcatggtaatatgcagggcatgggaaatatgcatggaatggggcct
cctccagggggtatgcatggaccaccaaacaacatgcaagggccaccaggaaacatgcag
ggcgctccaccatatatgcaaggcaaaccaccaaacatgggtgaaggaaaccgtggacag
ttcaaccagggacagaatcctgggcctcagtcaatgatgcatggaataggacagcaggga
cctaacggaaaaggagatggtcctcgaggaccacctaaccaccacatgggacccccacca
gagcgacagggccctggtcagggctcagatggaggccagtactggggtgatgatgggggt
tatcaagagggctggagaagaggccctggcggtcctgggcaggaatactctgtaggtcac
agaggaatctctggaggccaatgggagggccaggaaaggttttcctcacatgatggagag
tacatgggacatgaccggtatgatgggtatgaggactctggtgaggagtttgaccagagg
cagagacggccatcacatggagatgattcataccggaggggtggcccaagtggtcgtggt
ggaatgggcggctaccaagatgagtatggtggagatgaaagctttgattctcaagaagac
gtgggccaaggttggagaggaagaggaagaccacgtggtgggccaccaagaggaggtggt
gtaggaagaaaggggcttctcccaactcctgatgattatccctgtcactatgaaggagga
agaaaccaggagggctgggagggagggcgagattcaggtcatgagagttatcgggatggt
cagcagccagaccacaatatgcatgacagtccttcaccagccagtagagaacgttcatcc
tctctacagggcatggatatggcctcgctgccaccacgcaaacggccatggcatgacgga
ccaggcactggtgacatggactcccctggtgcagggcctgatgacagaggagcaggtcga
ccaccaccaagagacgaaggtgggtatgggcctccatcacggggaggaagaggtggttgg
ggccgtggtgggccgcccaacccaggtggtcctggtcctaatgtgggtccaaataccagg
cgaggggctccacgtggtgttatgaggggaggtcgcggacggtag
DBGET
integrated database retrieval system
