Sinocyclocheilus anshuiensis: 107654874
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Entry
107654874 CDS
T04917
Name
(RefSeq) polyadenylate-binding protein 4-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03015
mRNA surveillance pathway
sanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107654874
09123 Folding, sorting and degradation
03018 RNA degradation
107654874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107654874
03041 Spliceosome [BR:
sanh03041
]
107654874
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107654874
mRNA cycle factors
Stress granule specific factors
107654874
Spliceosome [BR:
sanh03041
]
Complex C
Other components
Complex C specific factors
107654874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_5
RRM_10
RBD_RDR6
DUF6262
POP1_C
Motif
Other DBs
NCBI-GeneID:
107654874
NCBI-ProteinID:
XP_016297656
UniProt:
A0A671MCN0
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MNAATAGTYPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNF
QQPADAERALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTF
SAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER
EAEMGAKAKEFTNVYIKNFGEDMDDQRLKELFDKYGKTLSVKVMTDPTGKSRGFGFVSYE
NHEDANKAVEEVNGTELSGKTVFVARAQKKMERQAELKRKFEQLKQERISRYQGVNLYIK
NLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVG
SKPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPANAIINQFQPAGGYFMPAMPQAQNRT
TYYAPNQLTQMRPNPRWQQQGGRGQGGFQGMPSSLRQPGPRANIRHLAPSASTQGPRGIP
TGAQRVGGSSQPMGPRPAMGVTTPRAMPPYKYATAVRNTHPQVVQPITLQQAQPAVHVQG
QEPLTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESHE
SLRSKVEEAVAVLQAHQAKKDATQKVGVTGVTVAATS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagcgacggcggggacttatccgatggcttctctctatgtgggcgacctgcac
cctgatatcacggaggctatgctgtatgagaaattcagtccggccggcccggtgctgtcc
atccgcgtgtgtcgggatatgatcacgcggcgctcgctgggctatgcctacgtcaacttc
cagcagcctgcggacgcggagagagctttggacacaatgaactttgatgtggtcaaagga
aagccgatcagaatcatgtggtcacaaagagatccgtcacttaggaagtccggggttgga
aacgtcttcatcaaaaatctggacaagtccattgacaacaaggccctatatgacaccttt
tctgctttcggaaacatcctgtcctgcaaggtggtgtgtgacgagaacggatctaagggt
tacgcctttgtgcattttgaaactcaggacgcagccgaccgcgccatcgagaaaatgaat
ggcatgttgctgaacgaccgcaaggtgtttgtggggcgtttcaagtccaggaaggagagg
gaagcagagatgggtgccaaagccaaagaattcacaaatgtttacatcaagaacttcggc
gaggacatggatgatcagagactgaaggagctctttgataaatatggtaaaactctgagt
gtgaaggtcatgactgaccccacagggaaatctcgtggatttgggtttgtgagttacgag
aatcacgaagatgctaacaaggctgtggaagaggtgaatggtacagagctcagtggtaag
acggtgtttgttgcccgagcacagaaaaagatggagagacaagctgaactcaagaggaag
tttgaacagctcaaacaggaaagaatcagcagatatcagggtgtaaacttgtatatcaag
aatcttgatgacaccatcgatgatgagaaacttcgtaaagagttctctcctttcggctcc
attaccagtgccaaggtgatgctggaggatggcaggtccaaaggttttggctttgtgtgt
ttctcctcacctgaggaggccacaaaggctgtgacagagatgaacgggcgtattgtgggc
tctaaaccactgtacgtagccctggcccaacgcaaagaagaacgcaaagctcatctgacc
aaccagtacatgcagcgtattgctggcatgagggccatgcctgccaatgctatcatcaac
cagttccagcctgccggtggttactttatgccagctatgccacaggcccagaacagaaca
acatactatgcaccaaaccagctcacccagatgcgcccaaaccctcgctggcaacagcag
ggtggcagaggtcagggtggcttccagggcatgcccagctccttgcgccaaccagggccc
cgtgccaacatacgccacctggctcccagtgcttccacccaaggcccacgcgggatcccc
acaggtgcacagagagtgggaggcagtagccaaccaatgggtccccgccctgccatgggg
gtgacgaccccacgtgccatgcccccatacaagtatgccactgccgtacgaaacactcat
cctcaggtcgtgcagcctattactctgcaacaggctcagccagctgttcacgtgcagggt
caggagcctctcactgcctccatgttagctgccgctcctcctcaggaacagaaacagatg
cttggtgagcggttgtttcctctcatccaggcaatgcaccccagtctagccgggaagatc
acaggaatgctgcttgagatcgacaactcagagctgctgcacatgctggagtcccatgag
tctctgcgctccaaggtggaggaggctgtcgcagtgcttcaggctcaccaggccaagaaa
gatgccacacagaaagtgggagttaccggtgtgactgtagccgcaacatcatga
DBGET
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