Sinocyclocheilus anshuiensis: 107657250
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Entry
107657250 CDS
T04917
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04270
Vascular smooth muscle contraction
sanh04625
C-type lectin receptor signaling pathway
sanh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107657250
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
107657250
09153 Circulatory system
04270 Vascular smooth muscle contraction
107657250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sanh04131
]
107657250
Membrane trafficking [BR:
sanh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107657250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
107657250
NCBI-ProteinID:
XP_016300763
LinkDB
All DBs
Position
Unknown
AA seq
1389 aa
AA seq
DB search
MSDTRSPVTDRTSSILSRDPPPDKRPKSDKLPGTPTHEFDPTDVLVQKSGFVVADRRPES
FGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKQDGAAMRAGVQTGDRIIKVNGTLVTQS
NHVEVVKLIKSGSYVALTVLGRPPGLPQIPLSEVDVDLGSPGGYGDPFVTSPNSYNAAER
TSSPLVSWEENSAPLNQRIDNKRMVSKEQQDIQGLKEDYSRTPTPKPLRDIQEAKKHIPH
QQGHTHESLCLRNSEDGFWVHEDQYKGDFSPEGLWSGRSVSSVQRRFYPASPESQRDSNC
SSPKSIPRDSLNFCPSPEVEDGFDLDSRFSSTIGSPPSRLASEIIAAEDDDFDIEQEQVN
DQCNCFQSIELLKSRPAHLAVFLHHVISQFDPAPLLCYLYTDLYKQTNSKETRRIFMDFL
TFFIDRGAVSGAFHTSSLLAQTQRRRPELIPEELHRQYIQTMQETLLPDVQRNLEDFRQK
RSMGLTLADVELSRLDSQQLAVERERSCAENILSKIDDVLLTSQTAEEEKFNAIQYVIFM
YMKHLGVRVKEQRNLESKRVRINFLPSKLRKSKTEKEGEEKLKKPRFPIRVPPRWPSRID
SVPSGRAGDNKHRPQKQMSQPALGGSELIEGGRLRGSQSSEGSDLLQSPSFITSPTFSAP
YSSPSDPSGRDPEFNMSSSAVVPRLSDGLQSGDVLDSIYPPCEDIPYNMDQLDEDGYRLL
DVGTPKLSRRFEELQSEDDQGSDVYSDVDPPNWQQVVGRDVLAGLTPHEIKRQEVINELF
YTERAHLRVLKVLDSVFYQKLTRDNILPPADIKNIFTNLEEIIQLHMRIADQMTAIRKKN
ESSVIDHIGDELLSWFSGGEEEKIKQAVGTFCSNQPFALELIKSRQKKDQRFTSFIQEAE
SNRLCRRLQLKDIIPAEMQRFTKYPLLMDNIVKYTDESEEKDKVRRAAECCRHILSHVNQ
SVKESENKQRLEDYQRRLDLSSLKQSENPMISEFKNLDLTKRKMVHEGPLSWKINKDKTI
ELYTLLLEDILVLMQKQDERLILRCHSKNLAGTADTKHIFSPIIKLSTVLVRSVATDNRS
FFVISMSKNGAQIYELMAQTVSEQRMWQRQIAQRADVMNAKPHSVIPLPQHDGDRDSVEL
SKLNKGSERISTGSIQSAEKDSEFSPTAALRDCVPDASPGEEDQVPRAGRDGSYLDSELL
NGRDADSLSCSSKADEALKTLAALKQVLVTQLMAQDEGERLGRSAGSRLLRTTSLRTPVE
HSSTRTPSRAQDYISGDTGFYECTEDYAAYLVLEGYGGPGESSTDDDIQVRRKESSLAHS
CAADSGISLKFSSPSSGSTSRLSRQVLSHLRCLQANLNHLKEMETKYYNLLRQRPVGSTA
DTDESRDKK
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacacggtccccagtcactgacagaaccagtagcattctcagcagagacccc
cctcccgacaagaggcccaaaagcgataagctgcctggtacccctacacacgagtttgac
cctacagacgtgctggtgcagaagagtggatttgtagtggctgacaggagacctgagtct
tttgggctggttcagagatgcgtgatcattcagaaagatgagaacggctttgggctgacc
gtcagtggggacaaccctgtttttgtgcagctcgtcaaacaggatggcgctgccatgcgt
gcaggtgttcagactggggacaggatcattaaggtgaacgggacattggtgacgcaatca
aaccatgttgaagtggtgaaattaattaaatccggctcatatgtggccctcacagtatta
ggccggcctcccgggttgccccagatccccctctctgaggtagacgtggatctcgggtca
ccggggggttatggggaccctttcgttacatctcccaactcatacaatgcagcggaacgc
acctcctctcctcttgtgtcatgggaagagaacagtgctccactcaaccaaagaatagac
aacaagaggatggtgtctaaggagcaacaggacatacagggactgaaggaggactacagc
agaactcccacacccaaaccactacgggacatccaggaagccaagaagcacattccacat
cagcagggccatacacatgagagtctgtgtctcaggaacagtgaagatggcttttgggtg
catgaggatcaatataagggagatttcagcccagagggtttatggagtggaagatcagtg
tcatctgtccagcgccggttctacccggcctctccagagagccaacgggactccaactgt
tccagtccaaagagcatccccagagacagcctcaatttctgcccctcccctgaggtcgag
gacggttttgacctggattctcgtttctcatccaccattgggagcccaccctcccgcctg
gcttcagagatcattgctgctgaagatgatgactttgacattgagcaggagcaggtgaac
gaccagtgcaactgcttccagagtattgagctgctcaagtctcgccctgctcatcttgct
gtctttctgcaccatgtaatctctcagtttgaccctgcacctctgctctgctacctgtac
actgacctctacaaacagaccaactccaaagaaacacggcggatattcatggacttcttg
acgttcttcatagaccggggggcagtaagtggagcttttcacacctcatctcttctcgct
caaacccagcggcggagaccagagctgattccagaggaattacacaggcaatatatacag
acaatgcaggaaactctccttccagatgtacagagaaacttggaggacttcaggcagaag
cgcagtatgggcttgaccctggctgatgtagagctgtctcgtctggactctcaacagctg
gctgtagagagagagagatcatgtgctgaaaacatcctatccaagatagatgacgttctg
ttgacttcacaaaccgcagaagaggagaaattcaacgccatacagtatgtgatctttatg
tatatgaagcatctgggagttcgggtgaaagagcaacgaaacctggagtccaaacgagtt
cgaattaattttcttccctccaaactaaggaaaagcaaaacggagaaggaaggggaggag
aagctgaaaaagcctcgctttcccatccgggtgcccccgcggtggcccagtcgcatcgat
tcagtaccgtctgggagggccggggacaacaagcatcggcctcagaagcagatgtctcag
ccagctttgggcgggtcagagctgatagagggtggacgtctgcggggcagtcagtcgagt
gagggctcagacctcctacagagcccgagttttatcacctctcccaccttcagtgcccct
tacagttcaccgtcagacccctctggcagggacccggagtttaatatgagctcgtctgcg
gtggttccccggctcagtgatgggctgcagtctggagatgtgctggacagcatctaccca
ccctgtgaagacatcccatacaacatggaccagctagatgaagatggatacagactcctt
gatgtgggcacacctaaactgagtagaaggtttgaagagttgcagagtgaggatgatcag
gggagtgatgtttactctgatgttgatcctccaaactggcagcaggtggtcgggcgtgat
gttttagcaggcctgacgccccatgagatcaagagacaagaagtcattaatgagctattc
tacacggagcgagcccacttacgcgtgctgaaggtcctagacagtgtcttctaccagaaa
ctcacccgagacaacatactgccccctgctgacatcaagaacatattcaccaacctggag
gaaatcatccagttacacatgaggatagcagatcaaatgacagcgatacgcaagaagaat
gagtcatcggtcatcgatcacataggagatgagttgctgtcttggttcagtggtggagag
gaggagaagatcaagcaagcagtgggcactttctgcagtaaccaacccttcgccctggag
ctcatcaaatcccggcagaagaaggaccagcgtttcacctccttcatacaggaggctgaa
agcaatcgactgtgtcgacgattacagctaaaggacatcatccctgcagagatgcagagg
ttcacaaagtaccccttactgatggacaacattgtcaagtacacagatgagtcagaggag
aaagacaaagtgagacgagcagccgaatgctgtcgacacattctcagccacgtcaaccag
tcagtgaaggagtcggagaataaacagagactggaggactaccagagacggctggacctc
tcttccctcaagcagagcgagaaccccatgatctcggagttcaagaacctggatctcact
aaaaggaagatggtccatgagggtcctctgtcctggaagattaacaaagacaaaactatt
gagctgtatactttactcctggaagacatcctggtgttgatgcagaagcaggatgagcgt
ttaattctcaggtgtcacagcaagaacctcgcaggaacggctgacacaaaacacatattc
agtcccatcatcaaactcagcactgtgctggtgcgctcggtggcgacagataacagatca
ttctttgtgatctccatgtccaaaaacggagctcagatttatgagctgatggcccaaaca
gtgtccgagcagagaatgtggcaacggcagattgctcaaagggcagatgttatgaacgcc
aaaccccacagcgtcattcctttgcctcagcacgatggtgacagagacagtgtcgagtta
agcaagctcaacaaaggctctgaacggatctccacaggaagcatccagtccgcagagaaa
gacagtgaattttcgcccacggcagccctgcgggattgtgtccctgacgccagccctggg
gaagaggaccaggtcccgagagctggcagggatggctcgtatctggactctgagctcttg
aacggcagggacgcagactctctgtcctgctcgtctaaagcagatgaggcccttaaaacc
ttggcggcgctgaagcaggtgctggtgactcagctgatggctcaggatgagggcgagcga
ttgggcagatcggccggcagtcgtctcctcaggaccacctctctacgcacaccggtggag
cacagctccactcgcaccccaagtcgagctcaggactacatctctggagatacgggcttc
tacgagtgcacagaggactacgcagcttacctggttctggaggggtacggtgggccaggc
gagagcagtacagatgacgatattcaggtccggagaaaggagtcgagtttggcccacagc
tgtgctgctgactcgggcatcagcctcaagttctcctcaccgtcctctggcagcacgtct
cgcctcagcagacaggtcctctcacatctacgctgcctgcaggccaacctcaaccacctc
aaggagatggaaaccaagtattataatctacttcgccaaaggcctgttgggtcaacagca
gatacggacgagagcagagataagaaatag
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integrated database retrieval system
