Sinocyclocheilus anshuiensis: 107657584
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Entry
107657584 CDS
T04917
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107657584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107657584
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107657584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_12
ARM_TT21_N
TPR_8
ANAPC3
TPR_7
ARM_TT21
SCAF11-like_C
TetR_C_5
Motif
Other DBs
NCBI-GeneID:
107657584
NCBI-ProteinID:
XP_016301226
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MAETGSDQAGDMKHDSISSPGISDQEKETASNAFEAFKAGSHDESLKHLDSLQELNKEDY
KVTMNKAITEFYKSGQTTTSTLKQTLITLKNQMHTAVDDIDGLDDVENSILYYNQAVIHY
HMRQYSEAISIGEKLYQFLEPFEEKFAQAVCFLLVDLYLLTFQPEKALHLLAVLEKLTVK
DGNSKNGKGESTNSTNKESTAMKAEFTAMVEAAKSKMHQYKVRAYIQMKSLKACKREIKS
VMNTSGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGPLKTGECVRCMFWNNLGC
IHFAMGKHNLGLFYFKKALQENDHICAQLGDGSNGQAAKKFTGIPMCALLANKRYELLYN
CGIQLLHIGRPLAAFECLMEAVQVYHSNPRLWLRLAECCITANKGSSEQETKGLPSKKGI
VQAVVGQGYHRKIVLASQSTQNTIYSEGQSAAIPVASMEFAAICLRNALLLLPEHQQHDS
KPDSGSKSCSQSGSTESGSETSDACSGKTQEGDKFIPAAPSSPLRKQEVENLRCSILACS
AYVALALGDNLMALNHAEKLLHQTKLSGSLKFLGHLYAAEALISLDRISDAIAHLNPENV
TDVSLGVTSSEQDQGSDKGDLEPVESSGKQTSLCYPSSVSSARATMLFNLGSAYCLRSEY
EKARKCLHRAASVVNTKEIPPEAILLGVYLELQNGNTQLALQIIKRNQLLPSVKPASSPD
LRKKPLPFQSSQPVQPIQTPSSFTQVQRK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacaggctcagatcaagctggtgacatgaaacatgacagcatttcctcccct
gggatctccgatcaggagaaggagacagcatccaatgcttttgaggcttttaaggctgga
agccatgacgagtccctgaaacaccttgacagccttcaggagcttaacaaagaggactac
aaggttacaatgaataaagcgatcactgagttttataaaagtgggcagacaacaactagc
accctgaagcagacgttaattaccttgaagaatcagatgcacacagctgtggatgatatt
gacggtttggatgatgttgagaacagtatcctctattacaatcaagcggtgattcattac
cacatgcgacagtattcagaagctatatccatcggggagaagctctaccagtttcttgaa
ccttttgaagaaaagtttgctcaggccgtttgtttcttgttggtggatctatacttgctc
accttccagccagagaaggcactgcacctgttggctgtgctggagaagctcactgtgaag
gatgggaacagcaaaaatggcaaaggagagagcaccaacagcacaaacaaggaatctact
gctatgaaagcagagttcacagctatggtcgaggcagctaaatcaaagatgcaccagtat
aaagtacgagcctatatccagatgaagtcattgaaggcctgtaaacgggaaatcaaatct
gtgatgaacacatctggaaattctgcgccctcactcttcctgaagagtaattttgagtat
ttgaggggaaattatcgtaaagctgtgaaactcctcaacagttcaaatatcgcagagcat
ccaggacccttgaaaacaggtgaatgcgtgagatgtatgttctggaataatctcggttgt
atccattttgccatggggaagcacaacctgggtcttttttactttaaaaaagcacttcaa
gaaaatgaccacatatgcgcccagcttggtgatggcagtaatgggcaggcagctaagaag
ttcacaggcatccccatgtgtgctctgttagctaataagcgctatgagctgctgtataac
tgtgggattcagttacttcatatcggtcgaccgctggcagcgtttgagtgtctgatggag
gcggtgcaggtgtatcactccaaccctcgactctggctcaggctcgcagaatgctgcatc
acagctaataaagggagctcggagcaggaaacaaaaggtttgcccagtaaaaaggggatt
gtgcaggctgttgttgggcagggctatcatcgcaagattgttttagcgtcacagtccaca
caaaacaccatttacagtgagggccagtcagcagcaatcccagtggccagtatggagttt
gcagcgatctgtctgcgtaacgctttgctcctgctcccagagcaccaacagcacgacagc
aaacctgacagtggctcgaagagctgcagtcagtcaggcagcacagaaagcggcagcgag
accagcgatgcctgcagtgggaagactcaagagggagacaagttcattcctgctgccccc
tcatcacccttgagaaagcaagaggtggagaatctcaggtgctcaattctagcctgcagt
gcatatgtggctcttgctcttggggacaacttaatggctcttaaccatgcagaaaagctt
ctgcatcagacaaagctgtcaggatcgctcaagttcctgggtcacctatatgcagctgaa
gccctaatctctctggacagaatttctgatgccattgcacatctcaacccggagaacgtt
actgacgtctcgttaggtgtcacatccagcgaacaagaccaaggttctgataaaggagat
ctggagcctgtggagtcctcagggaagcagacgtctttgtgttaccccagctcagtaagt
tctgcccgggccacaatgctcttcaatctgggcagtgcgtattgcttgaggagcgagtac
gagaaagcccgcaagtgcctccatcgggctgcttcagtggtgaacactaaggagattcct
ccagaagccattttactgggcgtctacttagagctgcagaatggaaacacacagctggcg
ctacagatcatcaaacggaaccagctcctcccgtctgtcaagcccgcctcctccccagac
ctccgtaagaaaccacttcccttccagtcatcccagcctgtacagcccatacagaccccc
tcctcctttacacaagtacagcgcaagtga
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