Sinocyclocheilus anshuiensis: 107658468
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Entry
107658468 CDS
T04917
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107658468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sanh03041
]
107658468
Enzymes [BR:
sanh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107658468
Spliceosome [BR:
sanh03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
107658468
Complex B
107658468
Complex C
U2 SnRNP specific factors
107658468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
107658468
NCBI-ProteinID:
XP_016302515
UniProt:
A0A671QMQ1
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MNWNKGGPSGKRGFGFGGFSLASGKKEEPRPPQKAHSAFGASGPSGGYGTNQQLSSFYKI
GTKRANFDEENAYFEDDEEESSSTDLPYIPAENSPTRKQFQSGGGGGGGGSDSEDDPLDA
FMAEVEDQAEKDMRKLEEKEKEKKLAKGIRDDIEEEDDQEAYFRYMAENPTAGLTQEEDE
EEVDYDSDGNPIAPTTKKIIMPLPPIDHSEIDYPPFEKNFYIEHEELSSLTEAGVVELRK
KLNLKVSGAAPPKPATSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALGGRDMIGIA
KTGSGKTAAFIWPMLVHIMDQKELEQGEGPIAVIVCPTRELCQQIHSECKRFGKVYGLRS
VAVYGGGSMWEQAKALQEGVEIVVCTPGRLIDHVKKKATSLQRVTYLVFDEADRMFDMGF
EYQVRSIASHIRPDRQTLLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDVTQIVEV
LQTGQEKWGWLTRRLVEFTSAGSVLIFVTKKTNCEELATNLNQEGYSLGLLHGDMDQSER
NKVIADFKKKNLPVLVATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGL
AYTLLTTKDTSFAGDLVRNLEGANQSVSKELMDLAMQNPWFRKSRFKGGKGKRLNIGGGG
LGYRERPGLGSESTERSSSGGSALGNYEAYKPSTGAMGDRMSALKQAFQSQYKNHFVAAS
GLPPKLTTKSSSSSGWTSAGSLSSLPSGAPEGPDRTHLSYSPSSSSSFSSMLPPPALSLG
TKMSGFSSAGSLSSVSDFYSSSSSKEGSRSDRNADDRGHRGDSHYRHSDRHSGGDRDRYA
ERDRHSDRDRHSDSRNGEGSHRDREGRSERDGGERSGTHKDSFAVPDPPKRKKSRWDN
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaacaagggaggcccgagtggcaagcgaggctttggattcgggggattctct
cttgcgagtgggaagaaagaggaacctcgtcctccccagaaggcccactctgcatttgga
gcttcaggaccatcaggtggatatggcacgaatcagcagctttcgtctttttacaaaata
ggaacaaaacgagccaatttcgacgaggagaatgcttattttgaggatgatgaagaggag
tctagcagtacagatctgccgtatatacccgccgagaactctcccactagaaagcagttc
cagtctggaggaggaggaggaggaggaggctccgacagtgaggatgaccctcttgatgct
tttatggctgaggtggaggaccaagcagaaaaagacatgaggaaacttgaagaaaaggaa
aaagagaaaaagttagccaagggtatacgggatgacattgaagaggaggatgaccaagaa
gcatattttcgttacatggcggaaaacccaacagctgggctgacccaagaggaagatgag
gaagaagtggactatgacagcgatggaaaccccattgctcctacgaccaaaaagattatc
atgccactgcccccaatagaccactcagagattgactatcctccctttgagaagaacttc
tatattgagcatgaggaactcagcagtctgactgaggccggagtggtggaactgagaaag
aaactcaatctgaaggtttcaggtgcagctcctcctaaaccagccaccagttttgcccat
tttggatttgacgagcagctcatgcaccagatccgtaaatctgagtacactcaacccaca
cccatccagtgccagggtgttccgatagctttgggtggcagagacatgattggcattgcc
aaaactggcagtggaaagactgctgctttcatttggccaatgctggtgcacatcatggac
cagaaggagctggagcagggagagggacccattgctgtgatcgtctgccccaccagagag
ctctgtcaacagatccattctgaatgcaagcgcttcgggaaggtgtatggcctccgctcg
gtggcagtatatggaggcggcagcatgtgggaacaagccaaagctctacaggaaggagtc
gaaattgttgtctgcaccccaggtcgcctgatcgatcatgtgaagaagaaggctacatct
ctgcagcgagtgacctacctggtgtttgatgaagctgatcgcatgttcgatatgggcttt
gaataccaagtgagatccattgccagccatatcagacctgatcgacagactttgttattc
agtgcaacatttcggaagaaaattgaaaagctggcacgagatattttggtcgaccccatt
cgtgttgtgcagggagacataggagaggctaatgaagatgtcactcagatagtggaggtg
ctacagactgggcaggaaaagtggggttggctgacacgcagactggttgagttcacctca
gctggctctgtgctgatctttgtcactaaaaagactaactgtgaggaactggctacaaat
ctcaatcaggaaggttatagcctagggctgctacatggagacatggatcagagcgagagg
aacaaagtcatcgctgactttaagaagaagaatctgcccgtattagtagctactgatgtt
gccgctcgtgggttggatattccatctatccgtacagttgtgaactacgatgtagcacga
gacattgacacacatacacatcgaattggtagaacaggtcgtgcaggagagaagggttta
gcttacactctgctcaccactaaagacacttcatttgctggtgacctggttcgaaattta
gagggagccaatcagagtgtttcaaaggagctgatggacctggcaatgcagaatccctgg
ttcaggaagtcccgctttaagggagggaaagggaagaggctaaatattggaggtggaggc
ctgggttacagagagagaccaggccttggatctgaatccactgagcgcagtagtagtggt
ggttctgctcttggtaactatgaagcctacaaaccatcaactggggccatgggagaccgt
atgtctgccctgaagcaagcatttcagtctcagtataaaaaccactttgtggcagcgtct
ggtcttcctccaaaactcaccacaaagtccagcagctcctccgggtggaccagtgcggga
agtctaagttctttgccttcaggagcaccagaggggcctgacagaacccacctgtcctac
tctccatcgtcctcttcctcgttttcctccatgctgccgccccctgccctcagcttgggc
accaaaatgagcggcttcagcagtgcaggctccctgagctcagtttcagacttttactct
agctcttcttcaaaagaggggtcccgtagcgataggaatgctgacgacaggggccatcgt
ggagatagtcattatcgtcacagtgacaggcatagtggcggagaccgtgatcgctacgca
gaaagggaccggcatagtgacagagatcgtcacagcgatagccgaaacggtgaagggagc
catagggacagagagggacggtcagaaagagatgggggcgagaggtcagggactcataaa
gacagctttgcagttcctgatccccccaaacgtaagaaaagcagatgggacaattaa
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