Sinocyclocheilus anshuiensis: 107659178
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Entry
107659178 CDS
T04917
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04140
Autophagy - animal
sanh04142
Lysosome biogenesis
sanh04145
Phagocytosis
sanh04148
Efferocytosis
sanh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
107659178
04142 Lysosome biogenesis
107659178
04140 Autophagy - animal
107659178
04148 Efferocytosis
107659178
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107659178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sanh04131
]
107659178
Membrane trafficking [BR:
sanh04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107659178
Hops complex
107659178
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_Vps41
Lact-deh-memb
aq_1631
zf_RING_Vps8
zf-C3HC4_2
zf-RING_16
zf-RING_11
DUF1664
zf-ANAPC11
zf-rbx1
zf-RING_5
DUF5600
zf-C3H2C3
KNOX2
RBSN_mid
STX17_N
DUF4446
DUF2175
zf_RING_Vps8_fungal
ANAPC4_WD40
zf-RING_UBOX
LETM1_C
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
107659178
NCBI-ProteinID:
XP_016303510
UniProt:
A0A671N097
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MASILDQYEDSQNIRQHSRVSAANIGITHSGFVNVRLEEEKPIFNKQRIDFSPPEKINHL
TVCNNQLCMSLGKDTLLRIDLGKPDQPNQIELGRKDDSKVHKLFLDPTGSHLVISLTTNE
CVYLNRNTQKVRSLSRWRGHLIESIGWNKLIGSETNTGPILVGTSQGIIFEAEISASEGS
LFNTNPDQYFRQVHSLEEDGKPAPVCCLEVERGLESKYFIVATTRKRLFQFVGKLAEGSE
QQGFSSIFAQNQDLLPSFQEFPVNMGYSEITFYTSKLRCSPKTFAWMMGNGVLYGQLDYV
RPDSLLSDVQVWEYTSDIDLNSVKPISIVLTQFHFLLLLPDRVKSICTLNGQVVHEENFF
PEKFGSLKKMIKDPITGLVWIYTEKAVFRYHIQREARDVWQMYMNMNKFDLAKEYCKDRP
ECLDMVLAKEAEHCFQNKRYLESAKCYALTQNYFEEIALKFIEAKQEEALKEFLIKKLTN
LKATEKTQITLLVTWLTELYLNRLGQLEVDDGKQHLFLETREEFRTFLKSPKHKDCFYNN
RNTIYDLLASHGDVDNMVYFSVIMQDYERVISHYCQHDDYSAALDVLSKHCDDKLFYKFS
PVLMQHIPKKVVDAWIQMGNRLDPKNLIPALVNYSQMGSMQQINETIRYMEFCVYELDVK
DEAIHNYLLSLYAKHKPDALLWYLEQAGTHVSDIHYDLKYALRLCAEHGYLQACVLVYKI
MELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMNCLSS
CNLLKIEDILPFFPDFVTIDHFKEAICNSLEEYNQHIEELKQEMEEATESAKRIREDIQE
MRNKYGVVESQEKCATCDFPLLNRPFYLFLCGHMFHYDCLLQEVIPHLSAFKQNKLEELQ
KKLAATTQTTKSRHRPKEEDTVSLGKGQGSREQIKCDIDDIIACECVYCGELMIKSIDKP
FIDPQKFDQEMSSWL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcatctattctggatcaatatgaagattctcagaacatccgtcaacacagccgtgtg
tcagcggccaacatcgggattactcattcagggtttgtgaatgtaaggttggaggaagag
aaacccattttcaacaagcagcgcatcgatttctcacctcccgaaaaaatcaaccactta
acagtgtgcaacaaccagttatgcatgagtctggggaaagacaccctgctgagaattgac
cttggaaaacctgatcagccaaatcagattgaactgggaagaaaggatgatagcaaagtg
cacaaactttttctagatcctacagggtcacatttagtcatcagcctcaccacaaacgaa
tgtgtatacctaaaccgaaacactcaaaaggtccgaagcctgtcacgatggagaggccac
ttgattgaaagcataggatggaataaattaatcggctctgagaccaacaccgggccgatt
ctggtcggcaccagccagggaatcatctttgaagcggagatctctgcctcagagggctct
ctgttcaacactaacccagaccagtacttcagacaggttcattccctggaggaggatggt
aagccagctccggtttgttgcctcgaggtagaacgtggcttggaatccaagtacttcatt
gttgcgaccacacggaaacgcctgttccagtttgtaggaaagctggcagagggatccgag
cagcaggggttcagctccatctttgcccagaaccaggatctcctacccagcttccaggag
tttccagtcaacatgggctacagtgagattacgttctacacgtccaagttgcgctgttcc
ccgaagacctttgcatggatgatgggtaatggggttttgtatggacagctggactatgtg
cggcccgactctctactcagtgatgttcaagtgtgggaatacacctcagacatcgattta
aactccgtcaagcccatctctatagtcctcacccagtttcacttcctgctcctgctccca
gaccgcgtcaagagtatttgcactctgaacggacaggtagtgcacgaagaaaactttttt
ccggaaaagttcggcagtctaaaaaagatgatcaaagatccaatcactgggctcgtgtgg
atctacaccgagaaagctgtgtttcgctaccacatccagagggaggcacgggacgtttgg
cagatgtacatgaacatgaataagtttgacctggctaaagagtactgcaaagacagacca
gaatgcctagacatggtgctggccaaagaggcggagcactgcttccaaaacaagcgctac
ctggagagtgccaaatgctatgctctcactcagaattactttgaggagattgcgctgaag
ttcatcgaggccaagcaggaggaggccttgaaagagtttctgattaagaagctgaccaac
ctcaaggccaccgagaagactcagatcaccctgctggtcacctggctgacagaactctat
ctgaaccggctcggtcaactggaggtcgatgacggcaagcaacacctctttctggagacc
cgagaagagttccgcacctttcttaaaagccccaaacataaagactgcttctacaacaat
cgcaacaccatctacgacctgctcgcaagtcacggcgacgtggacaacatggtgtatttc
tcagtcatcatgcaagattacgagcgcgtcatatctcattactgccagcatgatgactac
agtgcagccttagatgttctctccaaacactgcgatgacaagctcttctacaagttctcc
ccggtcctcatgcagcacatccccaaaaaggtggtcgatgcatggattcaaatgggaaac
cggttggatccgaagaatctgatcccagcgctggtgaactacagccagatgggcagcatg
cagcagataaacgagaccatccggtacatggagttctgtgtgtatgagctggatgtgaaa
gacgaagccattcacaattacttactgtcactttatgccaaacacaagccagacgctctg
ttgtggtacctcgaacaagcaggaacgcacgtctctgacatccactacgatttgaaatat
gccttgcgtctttgtgccgaacatgggtacctgcaggcctgtgtcttggtttataagatt
atggagctgtatgaggaagctgtggatctagctctacaagtggatgtagatttggccaag
tcttgcgccgaccttccagaggatgatgaggagttgaggaagaagctgtggctgaagatt
gctcgtcatgtggttcaggaggagaaagatgtgaagaaggccatgaactgtctgtccagt
tgcaaccttcttaagattgaggacatcttgcctttctttccagattttgttacgatagac
cacttcaaggaggcaatttgcaactccctggaagagtacaatcaacacatcgaggagctg
aagcaagaaatggaggaggccacagaaagtgccaaacgcatccgtgaagacatccaggag
atgaggaacaagtacggagtggtggagtctcaggaaaaatgtgccacttgcgatttcccc
ttgctcaacagacctttctatctcttcctgtgtggtcacatgttccattatgattgcctc
ttacaggaagtcatccctcacctctctgcctttaagcagaataaattagaggagcttcag
aagaagctggcagcgaccactcagaccaccaaatccaggcacaggcccaaagaggaggat
acggtcagcttaggcaagggccaaggaagcagagagcagatcaagtgtgacattgacgat
atcatagcgtgtgagtgtgtctactgtggtgagctgatgatcaaatccattgacaagcct
ttcatagatccacagaagtttgatcaagagatgtccagctggctctga
DBGET
integrated database retrieval system
