Sinocyclocheilus anshuiensis: 107659828
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Entry
107659828 CDS
T04917
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K08127
epiphycan
Organism
sanh
Sinocyclocheilus anshuiensis
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sanh00535
]
107659828
Proteoglycans [BR:
sanh00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
107659828
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_9
LRR_5
LRRNT
Motif
Other DBs
NCBI-GeneID:
107659828
NCBI-ProteinID:
XP_016304370
UniProt:
A0A671MQ29
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MVTLRLMWGLLVMCVVAASPRRYVRQAELDNYDNNNVDLDLNVDSDDVYDYYDGIDEPQI
EIGTLSPDEDIDPSHHASLEEEEEEEELPIKPQLIPSGSGESGTLMGPSAQGEEELRLTP
IDILQISGDISSSGDLGSGDLLDDKASGSGEPLGSGGSGASGDISGSVDSEDLGSGVSGH
FGSGIILISGGEEELHLTLETIPHKASGESGISWVSGASGLPEVSGEPSASGLLDVSGEP
VASGVLEVSGEPGASGVPELSGESGASGVPEVSGEPGVSGVPEVSGVSEVPEISGESGIS
EVPECFGESRTSGVPETSGEPVISGLPEASGEPVISGLPELSGEPEISVLPEVPEKPGVF
DVFGGSGVPEESKQPEVTLESGESGIPEESGVTEVPVVTTEILTPDLDEEEEILLTTPTT
PLEGTGGDIGSGVPDIDTDTTGMGTCMLCTCLVGSVYCDDLKLDHVPPLSKETTHFYARY
NKIARIGKSDFANLNKLKRIDLTSNGISRIDDDAFFGLPALEELVLRENYIRQLPALPPF
MTLIDASLNQLGSTGIQREAFKDMPRLLYLYLTDNNIDHIPVPLPDSLRSLHLQNNNIQM
MHEDTFCNPHDLNYIRNALEDVRLDGNPINLSRTPQAYICLPRIPVGALI
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggtaacgctgaggttgatgtggggactcctggtcatgtgtgtggtggcagcctctccc
cgcagatacgtccgacaagcagaactagataactacgacaacaacaatgtggatttagac
ctgaatgtggatagcgatgatgtctatgactattacgatggaattgatgaaccacagata
gagattggcaccttgagccctgatgaggacattgatccttcacatcatgcctcattggag
gaagaagaagaggaggaggaattacccataaagcctcagcttattccatctggctctggg
gagtccgggactctgatgggccctagtgcacagggagaggaggagcttcgtctgacgccc
attgacatccttcagatttctggggacatttcgagttctggtgacttgggctctggagac
ttacttgacgacaaagcatctggttctggagagcctttgggctctggaggttctggggcc
tctggtgacatatcaggttctgtggactcagaggaccttggttctggagtctctgggcat
tttggttcaggcataatattgatctcaggtggagaggaggagctccacttgacgcttgaa
accattccacacaaggcctctggggagtctggaatctcttgggtgtctggagcttctggg
ttacctgaggtgtcaggagagccttcagcctctgggcttcttgatgtatctggagagcct
gtggcttctggggtacttgaggtatcaggagagcctggggcctctggagtacctgagctg
tcaggagagtctggggcctctggggtacctgaggtgtcaggagaacctggggtctctggg
gtacctgaggtgtcaggagtatctgaggttccagagatttcaggagagtctgggatctct
gaggtgccagagtgtttcggagagtccaggacctctggggtgcctgagacgtctggagag
cctgtgatctctgggctgcctgaggcgtctggagagcctgtgatctctgggctacctgag
ttgtctggagagcctgagatctctgtgctgcctgaggtccctgaaaagcctggagtcttt
gatgtgtttggagggtctggggtccctgaagagtctaaacagcctgaggtcactttggag
tcaggagagtctgggatcccagaggagtctggggtgactgaggtcccagtcgtcaccact
gaaatattaactcctgatttagatgaagaggaggagatactcctaactaccccgaccact
cccttggaggggactgggggtgatatagggtcaggggtacctgatattgacacagataca
acaggtatgggtacctgtatgctctgcacctgcctggtcggatctgtgtactgtgatgac
ctgaagctggaccatgttcctcccctctccaaagaaaccactcatttctatgcccgctac
aacaaaattgctaggatcggcaagtctgacttcgccaacctgaataaattaaagaggatc
gatctgactagcaatggcatatccaggattgatgatgatgctttctttggccttcctgct
ctggaggagttggtattacgagagaattatattagacaacttcctgctctgccacccttt
atgacccttattgatgcctctctcaaccagctgggcagcactggcattcagagagaagct
ttcaaggacatgccaaggctactttacctttacttgacagacaacaacatagaccacatc
ccggttcctttgcctgacagtctgcgctctctgcacctacagaataacaatatccaaatg
atgcatgaggacaccttctgcaatccacatgacttgaattacatccgcaatgctcttgaa
gacgttcgcctggacggtaatcccatcaacctcagcagaaccccacaggcctacatatgt
ttgccacgtatccccgttggtgcccttatttaa
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