Sinocyclocheilus anshuiensis: 107659985
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Entry
107659985 CDS
T04917
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04140
Autophagy - animal
sanh04148
Efferocytosis
sanh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107659985
04148 Efferocytosis
107659985
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107659985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sanh04131
]
107659985
Membrane trafficking [BR:
sanh04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107659985
Hops complex
107659985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
107659985
NCBI-ProteinID:
XP_016304608
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MAFVTANWNPLGDAFYRKIELYEMGWNLKDGLRDCLVAAAPYGGPIALLKAHNRCSPSAR
PQLEIFSSSGLPLASFPWKSGVVKQLGWTVSDDLLCVQEDGTVLVYDLLGGFKRHFSMGN
EVSQSQVLETKIFHSPYGTGVAILTGALRFTLATNIDDIKLRRLPEVPGLQGAPSCWAVL
TQDRQSKVLVANGSHLFVLDNTACTPVTPPGLSPQASSIVHMCVSFSYKYLALLTDSGHV
WMGTSNLKEKLSEVDTKIKAPPKQMAWCRRPKSQQPSAVVMWDGLLLVVGECKETIQYHL
DDDSILVPELDGVRIISGTHHELLQEVPGACEEIFKIASMAPGALLLEAHKEYEKESQKA
DEYLREIKEQSLLSEAVRQCVEAAGHEHEPETQKTLLRAASFGKCFLSNFPPEQFVSMCR
DLRVLNAVRDYTVGIPLSHTQFKQMTIQVLIDRLVYRKLYPLAIEVCRYLKTPEYQGVSR
VLKYWACYKPYCMPSCMLVYTVVMYLKNELNRGDFFMMLRNQPVALSLYKQFCKHQEQDT
LKDLFNQDDDHEELGNFYVKASYKEQRLEARIAHLQSAVDEYYKAKNEFSAKTTEDEMRL
LRFQRKLEEEKGEQLVGFSLHDTMTTLLSVGLHKHAEQLYKDFRVPDKRFWWLRLKALAE
KEDWEELEKFSKSKKSPIGYLPFVEVCIKHHNKYEARKYVSKVTLEQKVKAHLAVGDVEG
AAEAAIERRNESEIGTVLSRCSATTDHLLVERLNRAKATVAKK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgtcacagcgaactggaaccctctgggcgatgctttttacagaaagattgaa
ttgtatgagatgggctggaatctgaaagatggtctgagagactgtctggttgctgcagct
ccatatgggggtcccatcgctctcctaaaggcacataaccgatgctctcccagtgccaga
cctcagttagagatcttctcttcctcaggactgcctctggccagctttccatggaagagt
ggagtggtgaagcaactgggttggacggtgtctgatgacctactgtgtgttcaggaggat
ggcactgtgcttgtctacgatctcttgggtggcttcaagagacacttcagcatgggcaat
gaagtttctcaaagtcaggtgctggagaccaagatattccattcgccgtatgggacaggt
gttgccatattgacaggtgccttgcgattcactttggccacaaacattgatgacataaaa
ttgaggcggttacctgaggttccaggtctacagggggcgccctcatgctgggcagtcctg
actcaggacaggcaaagtaaagtgctggtggccaatggatctcatctgttcgtcttggac
aatacagcttgcacacctgtgactcccccaggcctctctccacaagcgtccagtatagtt
cacatgtgtgtctcattcagttataagtatctggcgctcctcactgactctggccatgtg
tggatgggcacgtcgaacctaaaggagaaactcagtgaggtggacaccaaaatcaaagct
cccccgaaacagatggcctggtgtcgcaggcccaagagtcagcagccatcggctgtggta
atgtgggatgggctcctcctagtggtgggagagtgtaaagaaacaattcagtaccatctg
gacgatgactcaattctggtgccagaactggacggggtccggatcatcagtggaacacac
catgagctgctgcaagaggtcccaggtgcatgcgaggagatctttaaaattgcctcaatg
gctcctggagcactactgctagaggcacataaagaatatgagaaagagagtcagaaggca
gatgagtatctgagagaaattaaagagcagagtctactgagcgaggctgtgaggcagtgt
gtggaggccgccggacatgaacatgaacctgagacacagaaaacactcttgagggcggcc
tcatttgggaagtgctttttgagtaattttcctccagagcagtttgtcagcatgtgtaga
gacctgcgggtgttgaatgcagtccgagactataccgtcggcattccactttcccacact
cagttcaaacagatgaccatacaagtgctcatcgacagactggtgtatcgtaaactctat
ccactggctattgaggtttgccgctatttaaagactccagaatatcagggagtgagccga
gtactcaaatactgggcctgctacaagccctactgcatgccttcttgtatgctagtgtac
acggtggtcatgtacctgaagaatgagctgaacagaggagacttcttcatgatgttgagg
aaccaacctgtggctctgagcctctacaaacagttctgtaagcatcaggagcaggataca
ctaaaagatcttttcaatcaagatgatgatcatgaagaacttggcaatttctatgtaaag
gccagctataaagagcagagactggaagctcggattgctcatttacaaagtgctgtggac
gagtactacaaagccaagaatgaattttctgccaagacaacagaagatgaaatgcgtctg
ctgcggtttcagaggaagctagaggaagagaagggtgagcagctcgtgggattctccctt
catgacactatgaccacgctgctgtctgtgggactgcacaaacacgccgaacaactttac
aaagacttcagagtgcccgacaagaggttctggtggctgaggttgaaggctctggctgag
aaggaggattgggaagagctggagaaattttccaaaagcaaaaagtcccctattggatat
ctgccgtttgttgaggtgtgcattaaacaccataacaaatatgaagccaggaaatatgtg
tcaaaagtcacactggagcagaaggtgaaagctcaccttgctgtgggggatgtggaaggt
gccgcagaggctgctatcgagaggcgtaatgaatcagagatcggtactgttctgtcacgc
tgttcagccaccactgatcatcttctggtggaacgcctcaaccgtgctaaagccactgtt
gccaaaaagtga
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