Sinocyclocheilus anshuiensis: 107660539
Help
Entry
107660539 CDS
T04917
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-2-like
KO
K05637
laminin, alpha 1/2
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04510
Focal adhesion
sanh04512
ECM-receptor interaction
sanh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107660539
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107660539
09142 Cell motility
04820 Cytoskeleton in muscle cells
107660539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_N
Laminin_B
Laminin_I
Laminin_II
Laminin_G_3
DUF948
Tropomyosin
DUF3450
Motif
Other DBs
NCBI-GeneID:
107660539
NCBI-ProteinID:
XP_016305345
LinkDB
All DBs
Position
Unknown
AA seq
3117 aa
AA seq
DB search
MNRPCFGVLLGLLWRCCGAQQRGLFPAVLNLASMAEIKTNATCGETGPEMYCKLVEHVPG
QPVKNPQCRTCNLKSDYANERHPIEYAIDGTNRWWQSPSIMNGMDYHYVTVTLDLQQVFQ
IAYVILKAANSPRPGNWILERSLDGETFMPWQYYAITDTECITRFNIVPRTGPPSYMHDE
EVICTSFYSKIHPLENGEIQTSLINGRPSADDPSPTLLNFTSARYIRLWFQRIRTLNADL
MTLALNDPRDIDPIVTRQYYYSIKDISVGGMCICYGHAKACPLNPYNKKFSCECEHNTCG
ESCDRCCPGYNQKPWMAGTFLTRHVCEKCNCHDKSEECYYNQTVADAKLSLNMHGEYKGG
GVCLGCSENTGGNNCQSCVDGYYRPSGLSPHEPWPCRLCSCDLRGSLHSSCVPDESHATA
GLAVGSCICKQGYAGEKCDRCAFGYTGFPLCERCNCSSEGSVNQDPCQPPCVCKEHVEGQ
NCDRCKQGFYNLRGDCLHGCEKCYCSGLASLCAESHWDYSNVTDMSGWYLTGADGEGLVW
AVPSREMAHQLTVSQSDAQTHLTAPYFWSAPSAYLSKKLLAYGGSLSYDTESKDNPVPII
SAPDVIVEGGGLRLIDSSSGVAVYLFSTAERRIDLLPESFQHQASGLAVSKRDFHSVLNN
IQRLLLRASSTQEHSAIYRLGRVSMSVAADGSGSGVKARAVEVCQCPPGYDGTSCEMCAM
GYRRVNGTLYRGVCELCQCHGHVERCHDVTGHCLGCRDHTVGPYCDQCAPGYYGDATRGT
ADDCQPCACPLLSPSNNFSPTCHVDARDEVICDRCPPGYTGTRCDRCANGYFGRTNIPGG
SCQPCTCHGNLDLTAELSCDPVTGACLRCHEGYGGPDCERCAVRYFGDALIAKNCQACQC
HTNGSLSELCHQETGQCQCRQHVDGRQCDECMSGLHMQGAQGCVPCHCNSFGSKSFDCDE
SGQCRCQPGVTGQKCDRCAPGHFSFQEGGCTPCQCAHVGNNCDANTGQCICPPNTVGERC
DKCAPNHWGHYISSGCKLCGCNALGSVAQQCNVNTGCCMCHEQFRGEKCDECKLGYRDFP
QCISCQCSVAGSSLDTCDAESGLCACADRSGQCSCKANVEGVKCDRCKMGSFGLSHRNPL
GCSXCYCFGLSSSCMEATRLIRMRLTLMPEQTVLPLVDKSSRQEITVGVSFQHPDIIANA
DVVQQHLSEPYYWRLSKQFKRSMITAYGGKLKYAIYYEACDETGRTFYEPQVIIKGGPNK
DKVMVRHMPALQIGQLTRHEIDITEHEWKHSDDRPMSREDFMDVLFHVEYILIKASHGSV
MRHSRISEITLEVAEVGTPSQDSEIAHQIEKCDCPLGYAGLSCEECAAGFYRLSVHAGGA
ASRVGFGTCVRCQCNGHSDSCDPKTAVCQNCQHNTVGDKCEQCAAGFYGVVRGFPDDCKP
CACPLLNLENNFSPTCQTEGFNDRCTACPEGYEGKHCERCAAGFHGNPSVLGGRCEECKC
DAYGAFPSACDPRSGQCRCRPGASGLKCDQCMERHVCGPQGIVSCDDDCAGLLIRDMDRL
LHLIGSVNLTLPLPLPYKVLYRYENMTEELKHMLSPQRAPARLLQLAHSNLGSLVTEMDE
LLSRTTKVSADGEQTAADAERSRKGAEDLELYIKNTLLAAEALRDKARELNATLGSRDGA
PEKSVNEMNDEIQTMLAELRKRQLSGKKNIADEELGAAEALLARVKRLFGDPHQATEDLK
KEVSDKMGDYRQKLNEAQDLLRDAHNKTKQAEGLAVNNQLNLDRLQGKRDVAGEQKKEME
GILAEGEKMLDEANALSDSINRGKEELEEMARELGPLQDKLDFKVARLGRGLDDSIPDLL
LRAEDHAGQLNDSAAILDSILAEAKNLSFNATAAFNAYTNIKNYIDEADKVAKEAKKTSI
GALQLASGPKGSLKDQAKGSVQKSHRLWNEAKEKAFSHMQNGDNLGVLQFRLKGANKKNK
DXQKGLNDTMEKLNAIPDDLAAKIQVTKLKAAEANDTAINVLHRLKDMNLNLMGLKRNHS
KLEDDVKTANNLIKDPEKNIHAAGAKVKDLENEADRLLEKLKPIQELQDNLKKNISQIKE
LISQARKQANSIKVSVSSGGSXIRTYRPEIKKGRYNTIILHVNTVAADNLLFYLGSAKYV
DFLAVDMRKGKVNFLWDVGSGVGRVEYPDLVINDGNWHRIEASRIGLNGSISVHALEGPK
TGILPTLRSAKSPETYTVLDVDQNAYLFVGGMLGSVKKAHAVKTITFSVCMGEMSLEXKP
IGLWNYRERDGDCAGCVVSPQPADTEGTIQFDGEGYAAVSRPTRWNPNVSTVMFKFLTFS
IDALMMYFATRDMKDFMSAELSDGRVKVSYDLGSGTGSIISDKRYNDGKWKSFTMSRMKK
EANIAIMNIDTNEDEQLRMASPGGVTGLNLREDERIYFGGVPKTGNYRSEVVLKRFSGCM
KDIDVSRTPYNLLSSPDYTGMTKCCSIENLHTVSFPRPGYMELKPVSFDVGSEISLSFST
KSENGIILFGRGGLTSMTQLTQGLTPVHIPRRSRRQTGEPFLSVQLNKGALEVLVFTGSR
NPRRAFRKVDKGILHDGREHSLCIQRLPGASFTVQVDEEPPFQQPLPNDHPLSIHRLFIG
GIPTDIETGVQRPNVPFEGCIWNLLINTVPVDFSQPVAFENAEIGQCPDLAPPQTPEEEE
DEEEEEALRPTEAARPPPPASTATPLTEATPIPDTPTSVREAAAPCAAEAEPVVLELAKQ
FGLSRNSHMVFEFDDRKVKNRLIMEFEIRTEAASGLVFYMARINHADFTTIQLKEGMAHL
SYDLGSGNTSVSVPRIINDGQWHKIRVTREKQRGFLVIDGRYSKHTTSPKNADILDVVGM
LYVGGLPLNYTSKRIGPVLYSINACIRNFKMMHLPLDMEKPTSSYRVGSCFANPEKGTYF
DGTGYAKAVDTYRVGNDVSVGLEFRTAQSSGVLFGISSQKMDGLGIELVTGKLLFHADNG
VGRFTAVYEPDPEAGLCDGQWHTVSAHKLKHHLELVVDGKKSEAASPDARSASADTNDPV
YVGGYPEGLKQFGLTINTPFKGCMRNVKITKSGKTLEVQMNKVLELKGVQPLTCPAG
NT seq
9354 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaccgtgttttggcgtgctccttgggctgctgtggcggtgttgtggagctcag
cagagaggtctcttcccagctgtgctgaacctggcctccatggcagagatcaagaccaat
gccacatgtggagaaacgggaccagaaatgtactgcaaactagtggagcatgtaccagga
cagcccgtgaaaaaccctcagtgtcggacctgcaacctgaagagtgattatgctaatgag
cggcatcccatcgagtacgccatcgacggcactaacagatggtggcagagcccgagcatc
atgaacgggatggactaccattacgtcactgtgactctggacctgcagcaggtcttccag
atcgcttatgtgatcttgaaagctgcaaactcccctcggcccggaaactggattctagaa
cgttctctggatggtgaaacattcatgccgtggcaatattacgcgattacagacacagag
tgcatcacacgcttcaacatcgtccccagaacaggcccgccatcctacatgcatgatgag
gaagtcatctgtacttccttctactccaaaatccatcctctggagaacggagagattcaa
acctcactaataaacggccgtcccagtgcggacgatccatcgcccacattactcaacttc
acctcggcacgctatatccgcctgtggttccaaaggatccgcaccctaaatgctgacctc
atgaccctcgccctcaatgacccccgagacattgaccccatcgtcaccagacagtattac
tactccattaaggatatatcagtaggaggaatgtgcatctgttatggtcacgctaaggcc
tgccctctcaacccatacaacaagaaattcagctgtgagtgtgaacacaacacttgtggc
gagagctgtgaccgctgttgccctggttacaaccagaaaccctggatggcgggaaccttc
ctcacacgccacgtctgtgaaaagtgcaactgtcacgacaaatcagaggaatgctattac
aaccagactgtggctgatgctaagctgagtttgaatatgcatggtgaatataagggaggc
ggagtctgccttggttgctctgaaaacacaggaggaaataactgtcaatcatgtgtagat
ggctactacagaccaagtggactgagtccacacgagccctggccctgcagactctgctca
tgtgacctgagaggttcactgcactcttcatgtgtcccagacgagagtcatgccaccgca
ggtttggcagtgggctcgtgcatctgtaagcagggatacgcaggtgagaagtgtgacagg
tgtgcgtttggatacacaggattccctctgtgtgagcgatgcaactgcagcagtgaaggc
agcgttaaccaggatccctgccagccgccctgtgtgtgtaaggagcatgtggagggacag
aactgcgaccgctgtaaacagggattctataatctccgtggagactgtctccatggatgc
gagaagtgctactgttctggtctagccagcctgtgtgctgaatcccactgggactacagt
aatgtgacggatatgtctggatggtatctgacaggagcggatggggaggggcttgtgtgg
gcggtgcccagcagagagatggcccaccagctcactgtcagccaatcagacgcgcagact
cacctgacagcaccgtacttctggagcgccccgtctgcttacctgagcaagaaactcttg
gcgtacggaggctcgctctcttatgacacagagagcaaagacaaccccgttcccatcatc
agcgctcctgatgtcatcgtagagggcggcgggctgaggttgattgacagcagctctggg
gtcgcggtgtatctgttctccacagctgagcgcaggatagatctcctgccagagagcttt
cagcatcaggcttcaggactggctgtcagtaagagagacttccacagcgtcctcaacaac
atccagcgtctgctgctccgggcctcctccactcaggaacacagcgccatctacaggttg
ggccgtgtgagcatgagtgtggctgctgatggctctggcagcggcgttaaggcccgcgct
gtggaggtgtgccagtgtcctcccggatatgacggcacttcctgtgagatgtgtgcgatg
ggctaccgcagggtgaacgggacactgtaccgaggcgtgtgtgaactctgtcaatgccac
ggacacgtggaacgctgccatgacgtcactggacactgcctgggctgtagggatcacacg
gtcggaccgtactgtgaccagtgtgctcctggatattatggagacgccaccagaggaact
gcagacgactgtcagccatgtgcttgtcctcttctcagcccatcaaacaatttcagtccc
acatgtcatgtcgatgccagggatgaggtgatctgcgaccgatgcccgccgggttacacg
ggcacacgctgtgacaggtgtgctaatggctattttggtcgtaccaacattcctggaggt
tcctgtcagccgtgtacgtgtcatgggaacctggatcttacagcagagctcagctgcgac
ccggtgaccggagcctgtctgcgctgtcatgagggatatggagggccggactgtgaaagg
tgcgctgtcagatactttggggatgcccttatagccaagaattgccaagcatgtcagtgt
cacactaacggatcgctctcagagttgtgccatcaggagaccggacagtgccagtgtcga
caacatgttgatggacgtcagtgtgacgagtgtatgtctggcttacacatgcagggcgct
caaggctgcgtcccatgccattgcaattcattcggatcgaagtcgtttgattgtgacgag
agcggtcagtgtcgctgtcagcctggtgtgacgggacagaagtgtgaccgctgcgctccc
ggacacttcagctttcaggaaggcggctgcacaccgtgccagtgtgcccatgtaggaaat
aactgtgatgctaacacaggtcagtgtatctgtccgcccaacaccgtgggagagagatgt
gacaaatgtgcgcccaaccactggggtcactacatcagcagcggctgtaagctgtgcggc
tgtaacgcattggggtctgtggcacagcagtgtaatgtgaacactggctgctgtatgtgc
catgagcagttcaggggcgagaaatgtgatgagtgtaagctgggttacagagacttccca
caatgcatttcctgccagtgctcagtagcaggctcgtcactggacacctgcgatgcagag
tctgggctctgcgcgtgtgcagacagaagtgggcagtgctcttgcaaggccaatgtggag
ggagtgaagtgtgaccgctgtaagatgggttctttcggcctcagtcacaggaatccactg
ggctgcagtnagtgctactgcttcggcttgagcagctcatgtatggaggccacgagactc
atccgtatgaggctgactctgatgccagaacagaccgttcttcctcttgtggacaaatcc
agtcgtcaggaaatcacagtgggcgtgagctttcagcatcctgacatcatcgctaatgct
gatgtagtccagcagcatctgagtgagccgtactactggagactgtcaaaacagtttaaa
cgctcaatgataacagcctatggtgggaagctgaagtatgccatctattacgaggcttgt
gatgagacgggccgcaccttttacgagccccaggtcatcataaagggcggccccaataag
gacaaggtcatggttcgccacatgccagcgcttcagattggccagctgacccgtcacgag
attgacataacagagcatgagtggaagcacagtgatgacaggccgatgtctcgtgaggat
ttcatggacgtactgtttcatgtcgaatatatactaataaaggcctcacacggcagcgtc
atgagacacagcaggatttctgagatcactttggaggtggctgaggtggggacgccctcg
caggacagtgaaatcgcccatcagattgagaaatgtgactgtcctctgggatacgccggt
ctctcctgtgaggaatgtgcggctgggttctacaggctctctgttcatgccggtggggcc
gcgtccagagtgggatttggcacctgtgtccggtgccagtgcaatggacacagtgactcg
tgcgatcctaaaacagccgtctgccagaattgtcaacataacacagttggtgataagtgt
gagcaatgtgcggcagggttttacggcgtagtgcgtggctttcccgacgactgcaaaccc
tgtgcttgtccactcctcaacctggagaacaactttagtcccacctgtcagacggagggt
tttaatgaccgctgcaccgcctgtcctgaaggctatgagggaaaacactgtgaaaggtgc
gctgctggtttccacggtaacccgagcgtgttgggcggccggtgcgaggagtgtaagtgc
gatgcttacggtgcatttccctccgcgtgtgatccgcgctccggacagtgccggtgccgt
cccggagccagcggcctgaagtgtgaccagtgcatggagaggcatgtgtgtggccctcag
ggcatcgtgtcgtgtgacgacgactgcgcgggactcttgattcgagacatggatcgtctg
ctgcatttgattggcagcgttaatctcactctgcccctccccctgccgtataaagtgctg
tatcgatatgagaacatgacggaggagttgaagcacatgctgtcccctcagagagccccg
gcgagactgctgcagctggcccacagtaacctgggcagtctggtcactgagatggacgag
ctgctcagcaggacgactaaagtgtctgctgatggggagcagacggcagcagatgcagag
cggagccgtaaaggagccgaggacctggagctttacatcaagaacacactgctggctgct
gaagctttaagggacaaagcgcgtgagctgaacgcaactctgggctcgagggacggggct
cctgagaagagcgtgaacgagatgaatgatgaaatccaaacaatgctcgcagaactacgc
aaacgccagctctccggcaagaaaaacatcgctgacgaagaactgggtgccgcagaggct
cttttggctagagtgaagcgtttgtttggagatccacaccaggccacagaggacctgaag
aaggaggtcagtgataaaatgggcgattacaggcagaaactgaacgaagctcaggatctg
ctgagggacgcgcacaacaaaaccaaacaggccgagggactggctgttaacaaccaactg
aacctcgaccgtctgcagggaaagagggatgtggccggtgaacagaaaaaggaaatggag
ggaattttggcggaaggagagaagatgctggacgaagctaacgctctctcagacagcatc
aaccggggcaaagaggagctggaggagatggccagagagctgggccccctgcaggataag
ttggattttaaggtggcgcggttgggtcgcggtctggacgactccatccctgatctgctg
ctgagagcggaggaccacgccggccagctcaacgattctgctgccatactcgacagcatt
ctagctgaggcaaagaacctgtccttcaatgccaccgctgctttcaacgcttacaccaac
atcaagaactacattgatgaggccgataaagtggccaaagaggcaaagaaaaccagcatt
ggtgctctacagctggcctctggacccaaaggatctctgaaagaccaggccaagggttcg
gttcagaagagtcaccgtctgtggaacgaggccaaagaaaaggctttttcccatatgcaa
aatggagacaatctgggtgttcttcagttcagactgaaaggagccaacaaaaagaacaaa
gacntacagaaaggcctgaacgacacaatggagaaactcaacgccattcctgatgatcta
gcagcgaagatccaggtgactaagctgaaggcagcggaggccaacgacacggccataaac
gtgctccaccgcctgaaggacatgaacctcaacctgatgggtctgaagaggaaccacagc
aaactggaggacgacgtcaagacagccaacaacctgatcaaagacccggagaaaaacatt
catgcggccggagctaaagtcaaggatctggagaacgaggccgataggttgttggagaaa
ctgaagcccattcaggagctccaggacaacctgaagaaaaacatctcgcagatcaaagag
ctcatcagccaggctcgcaaacaggccaactctattaaggtgtctgtgtcgtccggtgga
agctgaatccgcacctaccggccggagatcaagaaaggccgctataacaccatcatcctc
catgtgaacacggttgctgctgataacctgctcttctacctcggatcggccaaatatgtg
gatttcttggcagtggacatgaggaagggtaaggtgaacttcctgtgggatgtgggatca
ggggtcggccgtgtcgaatatcccgatctcgtcatcaatgatggaaactggcatcggatc
gaggcctcacgtatcgggctgaacggcagtatctccgtccatgcactggaggggcccaaa
actggcatcttaccgaccctcagaagtgccaaatcacccgagacttacaccgtgctggat
gtggaccagaatgcttacctgtttgtcggcggcatgctgggctcagtgaagaaggcacac
gctgtgaaaaccatcacattctcagtctgtatgggagagatgtctctggaatgaaaaccc
atcggcctctggaactacagagagagagatggggattgtgctggatgtgtggtcagtcct
cagccggcggacactgaaggcacgattcagtttgacggagagggttacgccgccgtcagc
cggcccacccgatggaacccaaacgtttccacggtcatgttcaagtttctcacgttctcc
atagacgcgctcatgatgtacttcgccaccagagacatgaaggacttcatgagtgcagag
ctgagcgatggaagggtaaaagtgagttatgatctgggctctggcaccggctccatcatc
agtgacaaacgctataatgacggcaaatggaagtcgttcaccatgtcccgcatgaagaaa
gaagcaaacatcgccataatgaacatcgacactaatgaggacgagcagttgcggatggca
tctccaggtggagtgacaggcctcaacctaagggaggatgagaggatatattttggcggt
gtacccaagactggaaactacaggtcagaggtggttttgaagagattctctggctgtatg
aaagacattgatgtttccagaacgccatacaatctgctgagcagcccagactacacagga
atgaccaaatgctgctccattgagaacctgcacaccgtgagcttccccaggcccgggtac
atggagctgaagcctgtgtcgtttgatgtgggctcagagatctctctctccttcagcacg
aagagtgaaaacggcatcatcctgttcggcagaggaggactgacctctatgacgcagctc
acgcagggcctgacgcctgtccacatcccgcgccgctcgcgcagacagaccggagagccc
ttcctgtctgtgcaactgaataaaggggctctggaggtgctggtgttcacgggcagcagg
aatccacgcagagctttcagaaaagtggataagggaatactgcatgatgggagagagcac
tcactgtgcatccagagactcccgggagcatctttcactgtgcaggtggatgaagagcca
cccttccagcagccattacccaacgatcatcctctgagcatccatcggctcttcattgga
ggcatcccaacggacatagaaacaggtgtacagcggcccaacgtgccttttgagggctgc
atctggaaccttctcatcaacactgtgcccgtggatttctctcagcccgtggcctttgag
aacgcagagattgggcagtgtcctgacctggccccgccccagacccctgaggaagaggag
gatgaggaagaggaagaggctctgaggcctacagaagcagctcggcctccaccaccagcc
tccactgccacgcccctcactgaagccacgcccatcccagacacgcccaccagtgtccga
gaagctgcggcgccgtgcgcagcggaggcggagcctgtcgtgctggaactggccaaacag
ttcggtctgtccagaaacagtcacatggtctttgagtttgacgacaggaaggtgaagaac
aggctgatcatggagttcgagatacgcacagaagcagcctcggggctggttttctacatg
gccaggataaaccacgctgacttcaccaccatccagctgaaggagggaatggctcacctg
agctacgatctgggcagcggcaacacctctgtcagcgtgccgcgcatcatcaacgacgga
cagtggcacaagatccgtgtgacgagagagaagcagagaggttttctcgtgattgacggc
cgttactccaaacacaccaccagcccaaagaacgctgatattctggatgtggtgggaatg
ttgtacgtgggaggtttaccgctgaactacaccagcaaacgcattggaccggtgctgtac
agtatcaacgcttgcattagaaacttcaagatgatgcatctgccgctggacatggagaaa
cccacgtctagctaccgcgtgggctcctgcttcgccaacccagaaaaaggaacttatttt
gatggcaccggctatgctaaagctgtggacacgtatcgagtgggtaacgatgtgtccgtg
ggtctggagttcaggacggcacagagcagcggcgttctgttcggcatcagtagccagaag
atggatggactgggaatcgaacttgtcactggaaagcttttattccatgctgataatgga
gtggggcgcttcacagccgtatatgagccggatccggaggcggggctttgtgatggacag
tggcacaccgtctccgcccacaagctgaagcaccacctggagctcgtcgtggatggcaag
aagtccgaggcagcgagtccagacgcccgctctgcctctgctgataccaatgacccggtg
tatgtgggcggataccccgagggtctgaagcagtttggactcactataaacacaccgttt
aaaggctgcatgagaaatgtgaagatcactaaatctgggaagactctggaggtccagatg
aacaaagtcctggagctcaaaggagttcaacctctcacctgccctgctggttaa
DBGET
integrated database retrieval system
