Sinocyclocheilus anshuiensis: 107661217
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Entry
107661217 CDS
T04917
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107661217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107661217
Enzymes [BR:
sanh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
107661217
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107661217
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107661217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
SprB
LRR_R13L1-DRL21
LRR_9
type_II_gspD_N0
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
107661217
NCBI-ProteinID:
XP_016306197
UniProt:
A0A671L577
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MPKEKYDPPDPRRLYTIMSAEEAASGKKSHWTELEISGRVRSLSSSLWTLTHLTALHINN
NNLSRIPPEISKLPHLVYLNLSSNKLRSLPAELGNMVTLRELLLNNNCLRVLPYELGRLF
QLQTLGLKGNPLSQDILNLYQEPDGTRKLLNYMLDNLAVHPEQLPQRPWITLREQDQMMP
TAVFTVMCYNVLSDKYATRQLYGYCPSWALNWEYRKKGIMEEITNCDADIISLQEVETEQ
YYTFFLETLKERGYDGFFCPKSRAKLMSEQERKHVDGCAVFFKTEKFTLVQKHTVEFNQV
AMANSEGSEVMLNRVMTKDNIGVAVLLEVKKDLFASGLKQPAEKPFLLVANAHMHWDPEF
SDVKLIQTMMFLSELKSITERASGSINSASPTSDTSTIPIVLCADLNSLPDSGVVEYLSN
GGVAENHKDFKELRYSDCLTNFSCNGKPDGSITHSFQLKSAYEGNLMPYTNYTYDFKGVI
DYIIFSKTQMRVLGVLGPLETQWLKDNNITGCPHPHIPSDHFSLLAQLEYHPPLPPLNGL
HLPVHSSTACESKTLTE
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctccagacccacgcagattatataccatcatgtcagca
gaggaagcagccagtgggaagaagtcacactggaccgagttggagatttctgggcgggtc
agaagtctcagcagctcactatggacgctgacccatctgactgctctccacatcaacaac
aacaaccttagccggattcctcctgaaatctcaaagctaccccatctcgtctacctaaac
ctgtcctccaacaaactgcgcagcttgccagcagaactcggcaacatggtgactctcagg
gaattgcttttgaacaacaactgtttacgagttttgccttatgaacttggccggcttttc
cagttgcaaacacttggcctcaaaggtaatccattgtcccaggatatactcaacctgtat
caggagcctgatggaacaaggaaattattgaattacatgcttgacaatcttgcagtccac
ccagaacaactcccccaaaggccttggatcactttgagggagcaagaccaaatgatgccc
acagctgtgttcacagtaatgtgttacaacgtactgagcgacaagtatgcaacaagacag
ttgtacggctactgtccctcatgggcccttaactgggagtacaggaagaaaggcatcatg
gaggagatcacgaactgtgatgctgacatcatcagcctgcaggaggtggaaacagagcag
tactacactttctttctggaaacactgaaagagcgtggatatgatggctttttctgtcca
aagtctcgtgccaaactcatgtcagaacaggagcggaaacatgtggatggctgtgctgtg
ttcttcaagactgagaaatttactctggtgcagaaacacacagtggagttcaatcaggtt
gccatggcaaactcggagggctcggaggttatgctaaacagagtcatgaccaaagataac
atcggagtagctgtcctgttggaggtgaagaaagacttgtttgctagtggtttaaagcag
cctgcagagaaaccgttcttgctggtagctaatgcccacatgcactgggatccagagttc
tcagatgtgaagctcatccagaccatgatgttcctgtctgagctaaagagcatcactgag
agggcatcgggctccatcaactctgcatcacccacgtcagacaccagcaccatccctata
gtcctgtgcgctgacctcaactccctcccagactctggtgtggtggagtatctaagtaat
ggtggagttgcagaaaatcacaaagactttaaggaactgcgttacagcgattgcttaacc
aacttcagttgcaacggcaagcccgatggcagtatcacgcacagtttccagctgaagagt
gcctacgaggggaatctcatgccctacaccaactacacttatgacttcaagggcgtgatt
gactacatcatcttctctaagacacagatgcgtgttctgggcgttctgggtccactggag
actcagtggctgaaggacaacaacataaccggctgcccccacccgcacatcccctccgat
cacttttcccttctggctcagctggagtaccacccgcctttaccccccctcaacgggctg
catctgcctgtccacagcagtactgcctgtgaaagcaagacgcttacagagtga
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