Sinocyclocheilus anshuiensis: 107661561
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Entry
107661561 CDS
T04917
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
sanh
Sinocyclocheilus anshuiensis
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sanh03021
]
107661561
Enzymes [BR:
sanh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107661561
5.6.2.5 RNA 5'-3' helicase
107661561
Transcription machinery [BR:
sanh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107661561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SEN1_N
AAA_19
AAA_30
UvrD-helicase
Viral_helicase1
AAA_22
AAA_16
NAT10_TcmA_helicase
DUF6240
nSTAND3
Motif
Other DBs
NCBI-GeneID:
107661561
NCBI-ProteinID:
XP_016306683
LinkDB
All DBs
Position
Unknown
AA seq
2349 aa
AA seq
DB search
MMEKCLWCTTSLEAEGDAVIVAMLRRYSSGRLSEREMDSLNEDLGCCLECVVEYHRARDK
VPDLHKCLWEMEKARLVHLLGTILDKELEEDDIFIIEDDHVEPVSKILPAEFHDRLRSPL
FEVLKYPYLLCYRDLCDLVVKALCKLQDMKQSLSVFEKYQGIYLLLVHPNEQVRRWAIDT
AKTMKSVDRDAYYDLQEIFSCMFYVIELGMSLNFPDLDQESYAGGVIQTLPSHLYDSQNK
KNYWLGICMLLTQLSAEAMDSLFMGQINIPLCILNTMDGLKNEDNPASDPFWPALHCFMV
ILDRLGSKIWGQVDPNTAFQTITGAASYVAEIRSIRQKTMGGMVKVEPEYDDNMVTCSQM
VYDCYASEKPNQASGSSSSSGVSSNYVIYEDMQSLITVLDSEMGQSMRVYGSTFLWFIPF
VRSIMELPELNASYISEVIHYLCDKIRENRHMLTGQTSVCDKVTEFFTRILIQTVELHST
EGRMGILSRCALKWVGEIVLCIIQSDETHGPPDRMGGIHGVSSTSYNLGIVGRLPASGGG
NGAIIAGCMKLIRLLLKEGIRRSVPSATHFLNLLNKQLRGVTNKRWNLTRSESNELQKCL
LRVVRSMPERPASPLSVFPPPCAPSVEAATNTVISRNSVSTLNQKQHEDQEAGPSRAGDE
SGFIKEESIWNYRNWNLDEDLCSGLEDIIKAKKETLDPVSIPQLSPVVQLECIKPDLGKV
QENKSRLNDNQNLSKIKAIAKQKPSESLKSAKEECGFGAAEEEEEEEDDDEPLDIKLVCL
TKSIHKVESSDSEVDSSAIGKTCNRSMGTSKENVESSTIVISDDDSDNDERPNDILRSPE
VCVLSESPGRDYDDLSESQVFEFETQQYVASAWDDSDFDASDLTKKPKSDQLLKPQVDEA
PHEASPSSSETELIPDEDIERACQQAEDTIREQQQPQEPVDSCASSLSKASSTAESWDKF
AKPKLVKSTKTTPSDKKQPKKPLIIDAHAQKIRRHHLKRRSTSQDVEEPSSSTTPSSCGI
SSSSPSCSSISSPYFSAPSSSDTPAIVPPKKVRKVAEPESTAERLGLKKKERKAFQLSQR
SLDCVAKLRCHGQKVQVELQQKTRRVRRATKTSPQKRIVKGNKKLLGSQDIQFFKQSREK
HQRPATGAIMTLAPKPAKINQPGEVHLPKLTVASSGAGDIFPCPQPDPDHQRNNEKASSG
TNSTGDGAGNNKRIESKYFQASETADVNMEKEKPTQEDDEEWMFLTQMEPTDMELCSQME
QFDEENEEELFLTQRDPIDMDIDTDSESNTPGPSLTPKPIQTLIGGNDDHLFVKPGMSPM
SQKKAKPSTTKIYTPSSRSASLVLEMEKEAKPPPAANVAKAKIPRLPPAMPPPKTFQPLH
PPQLPKPLPSQHAPYAPELVTSSKISSTSEPPSYKVYQRPEAPVNKPVPSMDQSPMFDLS
ILTQAILKWEYRMLDNYKAFGSPHDLCQLPLKKVPVQFPSYLEYFNTFYPLLLINAFEEM
ASEWLKEGRVKLNLTVQGIEYSNRTASASFTANISQETDIKQLYPKEDDLVLLWLPDNTG
SYAHDEPNFHEPHPHFGYVSRSSVSNRGSRPILNLTIQTRSNISSGNSQPVLCEVIGSLI
SIFREFRALCLLRNGPMLRPLLAPHVSYFTHTLDSPSDLDSPEFNRDQARAIACGLAMIN
RTPKTPKFLLIHGPPGTGKSKAIGGLLYKLLSSGTNSAAPSGNLHSKSRRTRVLLCAPSN
AAIDSLMKKVILIFKEKCRNISAPQGNCGDINLVRLGSERTISKSLKPFSLDHQTKARAQ
RAQQTAEADIHRRKEQLEQIVENLSQRCAKTNKDSFEFKTLMEQKMQLLKEREGLSRQIK
ECRSRRQESQALVLQNAHVICCTLSTSGSIVLENAFRRLGHEPFSCVVIDEASQAKETET
LIPMLYRSAAVILVGDPNQLPPTVVSQKAKEFGYDQSLMARLCKSLYQSNPQLSPILLLS
VQYRMHPDICEFPSKYIYNSALKDDWQGQCRQYDQEQTTMTESELRLLRSLRGPCLCETA
QKRCSLSWPFKPYKVFDVTDGIEKKERDSFSNHKEVKLVLLLLKLLGEKQSVRVGVITPY
NAQKRRILNAVRGSGIDNKQLQVEVDTVDGFQGREMDCIIVSCVRASSEMGSIGFVGNRQ
RMNVTITRARFSLFILGHIRTLREQSDWRALIEDAWIRKTIIKTMQNDFERDARQILKQE
REPPTRSLSYPPVGKPSPVTSPVTHAPVETDPAPAPHPQHDTSNVPMPRLIPLECPNNPQ
MSDRPTDPRFAERRPIREQRPDRDGRGLPESRHSTNRSNSYEADSRSPGQSSRYSSKHRG
SSPSRRHRR
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaagtgtctgtggtgcaccacctccctggaggcagagggtgacgcagtgata
gttgccatgctgcgtcgctacagctcaggacggctgtctgagagagagatggactctctg
aatgaagacctcggctgctgtctggagtgtgtggtggagtaccatcgagccagagacaag
gtccctgatctgcacaagtgtttgtgggaaatggagaaggctcgactcgtgcatttgttg
ggaaccattctggacaaggagctggaggaggacgatatctttattatcgaagatgatcac
gtggagccggtgtcgaagatcttgcctgcagaattccacgaccgtctccgttctccactg
tttgaagttctgaagtatccgtacttgctttgctaccgtgatctgtgtgatttggtggta
aaggccttgtgtaagttgcaggatatgaagcagtctttgtctgtgttcgagaagtatcaa
ggaatatatctgcttctcgttcatcccaacgaacaggtgcgccgctgggcaatcgataca
gcaaagaccatgaagagtgtggacagggacgcctactatgaccttcaagagattttctcc
tgcatgttttatgtcattgagcttggaatgtctttgaactttccagatttggatcaagag
tcttatgcagggggcgtcatacaaacgctcccctctcacctctatgactcgcaaaacaag
aagaactactggctaggtatctgtatgttactaacgcagctcagtgcggaggcaatggac
tctctgttcatgggacagattaacataccgctttgcatactcaacacaatggatgggttg
aaaaatgaggataacccagcttctgacccattctggccagccctccactgttttatggta
attctggaccgacttggttctaagatctggggtcaggttgaccctaatacagcattccag
acaatcaccggagcagccagctatgttgcggaaattagaagcatccggcaaaaaaccatg
ggcgggatggttaaagtggaacctgaatatgatgacaatatggtgacctgcagtcagatg
gtgtacgactgttatgcctcagaaaaaccaaaccaagcatctggttcgtcatccagcagt
ggtgtttccagcaactatgtgatctatgaggatatgcagtccctgatcaccgtgcttgat
tctgaaatgggccagagcatgcgtgtatacggaagcacttttctgtggttcattccattt
gtccgttccataatggaacttccagagctcaacgcttcctatattagtgaagtcatccac
tatctttgtgataagatacgagaaaatcggcacatgctaaccggacagacgagtgtgtgc
gataaagtgaccgagttcttcactcgtatccttattcaaactgttgagctacactctact
gaaggacgaatgggaatactttctcgctgtgccctcaagtgggtgggagagattgtcttg
tgcatcatccaatcagatgaaacccatggaccaccagacaggatgggtgggattcacgga
gtcagttcaacctcatacaaccttgggatagttggaagactgcctgcatctggaggaggc
aatggtgccataattgctggctgcatgaaactgattcgactgctgctgaaagaagggata
aggagatctgttccaagcgcgacccactttttgaatttgcttaacaagcagttgcgtgga
gttacaaacaaacgatggaatctaacacgttctgaatctaatgagcttcagaagtgtttg
ttaagagttgtccggtcgatgccagaaagacctgcttctccactctctgtttttccacca
ccatgtgcaccatcagtggaggcagctacaaacactgttatttccagaaattcagtgtca
accctaaatcagaaacaacatgaggaccaggaggcaggtccgagcagagcaggagatgaa
tctggttttatcaaagaggagtcaatttggaattatagaaattggaacttggatgaggat
ttgtgcagcggtcttgaggatatcataaaggctaagaaggaaacccttgacccagtgtca
attccacagctgagtccagttgttcagttggaatgcattaaaccagatctgggaaaagtg
caggaaaataaatccagattaaatgataaccagaatttgtcaaagatcaaagccattgcc
aaacaaaagcctagtgagtccttaaaatcagctaaagaggaatgtggttttggagctgct
gaggaggaggaggaggaggaggatgacgatgaaccccttgatatcaaactggtttgtctg
acaaaatctatccacaaagttgaatctagcgactccgaagttgacagtagtgctattgga
aaaacttgtaaccggtccatgggcacctcaaaggaaaatgtggagtccagtaccattgtt
atctctgatgatgattctgataatgatgaaaggccaaatgacatcctgaggtctccagaa
gtttgtgtcttgtctgagagccccggtcgtgattatgatgatctcagtgaatcacaggtc
tttgagtttgagacccagcaatatgtggcgtctgcctgggatgattccgattttgatgcg
tcagacttgacgaagaagcccaaatcggaccaactactcaaaccacaggtggatgaagct
cctcatgaagcatctccatcaagttcagagaccgaactaattccagatgaagacattgag
agggcttgtcagcaagcagaagatacgatcagagaacagcagcagccacaagagccagtg
gattcatgtgcatcatcactgtccaaagcatccagtactgcagaaagctgggataaattt
gccaaaccaaaactggttaaaagcacaaaaacaactccatctgataagaagcagcctaaa
aagccattgataattgatgcccatgctcaaaaaatcagacgccaccatttgaaacgcagg
tccacatctcaggacgtagaggaaccttcctcttcaactactccatcctcatgtggtata
tcatcttcctctccatcctgcagctctatttcctcaccttatttttctgcccccagttca
agtgatacccctgcgattgttcccccaaagaaggtgcgtaaggttgctgagccagaatca
acagcagagcgtttgggattaaaaaagaaggaaaggaaagcttttcaactttctcagcgc
tccctggattgtgttgctaaactgaggtgccatggtcagaaagtgcaggtggaactacaa
cagaagacaaggcgagtgcgtcgagccactaagacttctccacagaaacgtatcgtaaaa
ggcaacaagaaacttctgggatcacaagatattcagtttttcaagcaaagtcgtgagaag
catcagaggccagcaacaggagccatcatgacattagctcccaaaccagcaaagatcaat
cagccaggtgaagtgcacttaccgaaacttacagttgcaagcagcggggctggtgatatc
tttccctgtcctcagccagatcctgaccatcagcggaataatgaaaaggcttcatcagga
accaattctacaggtgatggggctggaaataataagagaatagaatccaagtacttccaa
gccagtgagactgctgatgtcaacatggaaaaagaaaaacctactcaggaggatgatgaa
gaatggatgttcctcactcagatggaacccaccgacatggaactgtgctctcaaatggag
cagtttgatgaagaaaatgaggaagaactctttcttacccagagagatcctattgacatg
gacattgatacagatagtgagtcaaataccccagggccaagcttgacacctaaacctatt
cagactcttattggtggaaatgatgatcatttgttcgtgaagcctggcatgtcacctatg
tctcagaaaaaggccaaaccttctaccacaaaaatatacacccccagctcccgcagtgcc
tcgcttgtccttgaaatggaaaaagaagccaagcctcctcctgctgcgaatgttgcgaaa
gcgaagatcccccgactgcccccagcaatgccacctccaaaaacatttcaacctctccat
cctccacaactcccaaagccacttccttcacaacatgctccatatgctcccgagttggtc
actagttctaaaataagctccacctcagagccaccatcttacaaggtataccaaagacct
gaggctccagttaacaaaccagtaccctcgatggatcaaagcccgatgtttgacctttca
atcttgacccaagcaatccttaaatgggaatataggatgcttgacaactacaaagcattt
gggagtccacatgatctgtgccagctaccgctgaagaaagtgccagttcagtttcctagc
tacctggagtacttcaacaccttttaccccctgctgctaattaatgcatttgaagagatg
gcgagtgaatggctcaaagagggcagagtcaagcttaacctaacagtccagggtatagaa
tacagcaatcgcacagctagtgccagcttcacagcaaacatttctcaggaaactgatata
aaacaactgtacccaaaagaagatgaccttgtgctactttggttgcctgacaacactggg
tcatatgcccacgatgaacctaatttccatgaaccacatcctcattttggctatgtgtct
cggtccagtgtttccaacagaggttccaggccaattctaaacttgacgattcagacacgt
agtaatatatcttcgggaaattcccaacctgtgctctgtgaagttattggatcattgatc
agcatattccgggagttccgtgcgctgtgtttgctgcggaatggaccaatgttgcgtcct
cttcttgctccacatgtgtcttatttcacgcacactctggatagcccatcggacctggat
tcaccagagttcaacagggaccaagcaagagcaatagcttgcggtcttgccatgataaac
agaacaccgaagaccccaaaatttctccttatccatggtcctccaggaaccgggaagagt
aaagcaattggtggcctgttgtacaaactactatcttcgggtactaacagtgctgctcct
tcgggaaaccttcactccaagtctcgacggacacgagttcttctctgtgctccctctaac
gctgccatcgacagtctgatgaagaaagtcattttgatctttaaagagaaatgccgaaac
atcagcgcacctcaaggtaactgcggtgacataaacctggtacgattgggaagtgaaagg
accatctcgaagtcactaaaacctttcagcctcgaccaccagactaaagctagagcacag
cgagctcagcaaactgcagaagctgacatacacaggcggaaggagcaactggaacaaatt
gttgaaaatctctcccagcgatgtgcaaaaaccaataaggattcttttgagttcaagacg
ttgatggagcagaagatgcagcttctgaaagagagagaaggactgagtcggcagattaaa
gagtgtcgcagcaggcgacaggagagtcaagctcttgtgctgcaaaacgctcatgtgatc
tgctgcacgctcagcaccagtggaagtattgtcctcgagaatgccttccgtcgtctcgga
catgaaccatttagctgcgtcgtcattgatgaggctagtcaggctaaagaaactgagact
ctgatccccatgctgtaccgaagtgctgctgtaatccttgtcggtgatcccaaccagctt
ccaccaacagttgtctctcagaaagcaaaggagtttggctacgaccagtctcttatggca
cggttatgcaaaagtctttatcagtcaaacccgcaactctctccaatcctcctgctcagc
gtgcagtaccgcatgcacccggacatctgtgaattcccctccaagtacatctacaacagc
gctcttaaggatgactggcaggggcagtgcaggcagtatgatcaggagcagacgactatg
acggagtctgaattaagactcctcaggtcactgagaggaccgtgcttgtgtgagaccgct
cagaaacgctgttccctcagctggcccttcaagccctacaaagtgttcgacgtgacggat
gggatagagaagaaggagagagattcattttccaatcacaaagaagtcaagctggtcttg
ctgctgttgaagctgctgggcgagaagcagtcagtgcgagtgggcgtcatcacaccctac
aacgcccagaaacgccgcatactgaatgccgtcaggggttcaggcatcgacaacaagcaa
cttcaggttgaagtcgatacagtcgatggctttcagggcagagaaatggactgcatcatt
gtgtcttgtgtgagagccagcagtgaaatgggctccattgggtttgttggaaatcggcag
agaatgaatgtaaccatcaccagagccagatttagtctctttatactgggacatatacgc
acactcagggaacaaagtgattggagagcactgattgaggacgcttggatacgtaaaact
atcatcaaaacaatgcaaaacgattttgaaagggacgccaggcagattcttaaacaagaa
cgagagccgccgacccgcagtctctcttatcccccagtcgggaaaccaagccctgtgacc
tcacctgttacgcatgcacctgtggaaacagaccccgcccctgcgccccaccctcaacat
gacacgagcaacgtgcctatgccacggctaatacccttggaatgccctaataacccacag
atgagcgacaggcccacagacccacggtttgcagagcgccggccaatcagagaacagaga
ccagacagagatgggcggggcttaccagagtcccgccactcaacaaacagatctaattca
tatgaagccgactctagaagtcctggccagtcttccagatactcttcaaaacaccgcggt
tcttcaccgtcaagacgacacaggagataa
DBGET
integrated database retrieval system
