Sinocyclocheilus anshuiensis: 107661722
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Entry
107661722 CDS
T04917
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03440
Homologous recombination
sanh03450
Non-homologous end-joining
sanh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107661722
03450 Non-homologous end-joining
107661722
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
107661722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sanh03032
]
107661722
03400 DNA repair and recombination proteins [BR:
sanh03400
]
107661722
DNA replication proteins [BR:
sanh03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
107661722
DNA repair and recombination proteins [BR:
sanh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
107661722
BRCA1-C complex
107661722
NHEJ (non-homologous end-joining)
MRX complex
107661722
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
Intein_splicing
AAA_29
UPF0231
AAA_13
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
107661722
NCBI-ProteinID:
XP_016306955
UniProt:
A0A671KVQ3
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQVITFFSPLTVLVGPNGAGKTTIIECLKYITSGDFPPG
SKGSTFVHDPKDAHETDVQAQIRLQFIDVNGDPLDVQRSMQSTQKGKKTEFKTLEGVIKR
FKHGKKVSLIHKCAEMDREMISALGVSKAVINHVIFCHQEESNWPLSEGKALKQKFDDIF
SATRYIKVLETLRALRMKQASTVKTCQTELKYLKQNKDKAQEIRELLSTKEAQLVSSKES
VQRIESQIDPLENRMNDIDSSLSKVMKLDIDIKALDSRKKQMEDDNRELEEKMEQVFHGT
DDQLQDMYQNHQRNVKEKERRLAECQHDLERAGRECQRMNCIKSDLLVEQGRLQLEADRH
TQNIKKRVTQVKSLASFLELEGYDRTTLNERQLQSFHRQVKERLDQDTEALNQTMHDMQE
KEAQKQQSIDDLRDKKTGLERTIELKRDIQAKKQQELKNIKFDLQRLEGSSSRLQELETE
LQKAERELDNAVQACTVDSLKVEVVELQKEKTELDQAQRKLDQEMELLNTHTAARTQMDM
LKKTKMEKEEQVRTISSRHNEELVSLMGHFPSKKELEDWIYSKSKEINSTRDRLNKMNKE
LASGEQKKTHFTAEVKRKEEQLASYEERLFSVCGSQDFESDLDKLEDELEKCSKQRAMLA
GATAVYSQFISQLTEECEPCCPVCQRVFPSEAELQDIINDMQSKLRLVPDKLKNTEHDLK
RKERRRDEMMALKPIRQSIAELQEKELPELRNKLQLVNRDIEKLKEDTEEQETLLCTLMS
EEDTAKACLQEISHMDRYQLDLKDVERKIAQHAARLQGVDLSRSMQQVSQEKPETQHRLD
TTCSKIELKRKLIQDQQEQIQALRSSVNEIRGEKLQISSNMQKHQQLEEQCVEFSTEIQT
LHRDIRDAKEQVSPLAATLEKLQQEKQDHAERRRQKQEEGQEKINGIKEKVKNLTLLERE
ITKYIEEGKDSYKEQKETELQEVDKQLHEAEKQRDKINKDIGNIRQDIDTQKVQERWLQD
NLTLQKRVEELKEVSRKREDLVKEMGNMQVLQLRNERQEVERKLEDLKKNHSVALGRQKG
YKDEILRFRKELSEDQYCRAEDLYRDQMIVMRTTELANKDLDIYYKALDRTIMKFHSMKM
EEINKIIRDLWRSMYRGQDIEYVEIRSDVDENTSAGLKRRTYNYRVVMVKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQC
NFQLLVITHDEDFVELLGRSNYVEHFYRIRKNQDQCSEITKCNINTLNSYLH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagatcgaaaagatgagtatcctgggagtaaggagttttggagttgaggataaa
gacaaacaagtgatcaccttcttcagccctctgacggtccttgtggggcctaatggagct
ggaaaaacgaccatcatcgaatgtctcaagtacatcacttcaggagactttccaccagga
agtaaaggaagcacattcgtccatgatcccaaagatgcccatgagacggatgtacaggca
cagatcagactccagtttatagacgtgaatggcgatcctttggatgtccagaggtctatg
caaagcacacagaagggcaagaaaacggagttcaaaacccttgagggtgtcattaaaaga
ttcaagcacggaaagaaagtgagcctgatccataaatgtgctgaaatggaccgtgagatg
atctcagcactgggcgtctccaaggctgttatcaaccatgtcatcttctgccaccaagag
gagtccaactggcctctcagtgaaggaaaggccctcaagcagaagtttgatgacattttc
tcagccacaaggtacattaaggtattggagaccctgcgggcactgaggatgaagcaggcc
agcactgtcaaaacctgccagacggagctcaagtacctgaaacagaacaaagataaagcc
caagagattagagagctgctgtccactaaagaggctcagctggtttcctctaaagaaagt
gtccaacgcatcgaaagtcagatagacccactggagaatcgaatgaatgacatagacagt
agcctcagcaaagtgatgaagttggatattgacatcaaagctttggacagcaggaagaaa
cagatggaggatgataaccgggaactagaggaaaagatggaacaggtgttccatggcaca
gatgatcagctgcaggacatgtatcagaaccaccagaggaatgtgaaggagaaggaacgg
agacttgcggagtgccagcatgatcttgaacgtgccggccgagagtgccagaggatgaac
tgcatcaaatctgacctgctagttgagcaaggccgtctgcagttggaggcagatagacac
acacaaaacattaaaaagagggtcacccaggtcaagagtttagcatctttcctggagttg
gagggttatgaccggaccactcttaatgagcgacagctccagagcttccacagacaagtc
aaagagagactggaccaggacacagaggcccttaaccaaactatgcatgatatgcaggag
aaagaggcacagaagcagcaaagcatcgatgatctccgagataaaaagacaggtctagag
agaaccattgagctgaagagagacatacaggccaagaaacaacaggaactgaaaaacatc
aagtttgacctccaaagactggagggctcctcaagcagactacaggagctagaaactgaa
cttcagaaagcggagcgtgagcttgataatgccgtacaggcctgtacggtggacagtcta
aaggtagaggtagttgaactacagaaggagaaaactgaactggatcaggcccagcgcaag
ctagaccaggagatggaattactcaacacacataccgcggcacgcacacagatggacatg
ctcaagaagaccaagatggaaaaagaggagcaagtgaggacgatcagttcgagacataat
gaagagctggtgtctctgatgggacacttcccaagcaagaaagagctagaagactggatc
tactccaaatccaaagagatcaactccaccagagaccggcttaacaaaatgaataaggag
cttgcatctggagaacagaagaagactcactttactgcagaagtcaaacgtaaggaagag
cagctggccagctatgaagagagacttttcagtgtgtgcggcagtcaggactttgagtcg
gacttggacaaactggaggatgagttggagaagtgttccaaacagagagctatgctggcg
ggtgccacagccgtgtacagtcagttcatcagtcagctgacggaggagtgcgagccctgc
tgtcccgtgtgtcagcgtgtgttcccgtcagaggcagagctccaagacatcattaatgac
atgcagtccaagctgcggctcgtcccagacaaactaaagaacactgagcatgacctgaag
aggaaggagcgcaggcgtgatgaaatgatggcactgaagcccatcaggcagtccatagcg
gagctccaggagaaagagctgccagagctcagaaataaactccagcttgtgaatcgagac
attgagaagctaaaagaagacactgaggagcaagagaccctgctgtgcacactgatgtct
gaggaagacacagccaaggcctgtctgcaggaaatatcacacatggatcgctatcagctt
gacctgaaggatgtagaaaggaagatcgctcaacatgcagccaggctgcagggagttgac
ctcagccgctccatgcagcaggtcagccaggagaaaccagagacccaacaccgcctggac
accacctgcagtaagatcgagctgaagaggaagctgatccaggaccagcaggagcagatc
caggccttgaggagcagtgtaaatgagattcgtggagaaaagctccagatctccagcaat
atgcagaaacatcaacagttggaggagcagtgtgtggagttctccactgagatccaaaca
ctccacagagacattcgagatgcaaaggagcaggtgtctcctctagctgccactctggag
aagctccagcaggagaaacaggaccatgctgagcgcaggagacagaaacaggaggaagga
caggaaaagataaatggaatcaaggaaaaagttaaaaacttgaccctccttgaaagagag
attaccaagtacatagaagagggcaaggacagctacaaagagcaaaaagaaactgagcta
caagaggtggacaaacaactacacgaggctgaaaaacagcgagacaagatcaataaagac
attggcaacattcgacaagatattgacactcagaaggttcaagagcgctggctacaggac
aacttgaccttacaaaagcgagtggaggagctgaaagaggtgtccaggaaacgtgaagac
ttggttaaggagatgggcaacatgcaagttctgcaactgcgcaatgagcggcaagaagtg
gaacgaaagttggaggacctaaaaaagaaccacagtgtggctctcggtcgacagaaaggc
tacaaagacgagatcctccgttttcgtaaagagctcagtgaggatcaatattgccgggcc
gaggatctctacagagaccaaatgattgtgatgagaacaacagagttggccaataaggac
ctggacatctactataaagccctagaccgaacaataatgaagtttcacagcatgaagatg
gaggagattaataaaatcatcagagatctatggcggagcatgtacagaggacaagacatt
gagtatgtggagatacgctctgatgtggatgagaacacctccgctggcctgaaaagaagg
acctataactatagagtggtaatggtcaaaggagacactgctttggacatgcgtggacgt
tgcagtgctggacaaaaggttcttgcctctctcataatacggttggctctggctgagacg
ttttgtctgaactgtgggattctggcgctggatgagcccaccaccaacctagacagagag
aatatagagtctttggcacacgcactggtggagataatcaagagtcgttctcgccaatgc
aacttccagctccttgttatcacccacgatgaggattttgtggagctcctgggacggtcc
aactatgtggagcatttctacaggatcaggaagaaccaggaccagtgctcagagatcacg
aaatgtaacatcaacactctcaactcctacctgcactga
DBGET
integrated database retrieval system