KEGG   Sinocyclocheilus anshuiensis: 107661722
Entry
107661722         CDS       T04917                                 
Name
(RefSeq) DNA repair protein RAD50-like
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03440  Homologous recombination
sanh03450  Non-homologous end-joining
sanh04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    107661722
   03450 Non-homologous end-joining
    107661722
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    107661722
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sanh03032]
    107661722
   03400 DNA repair and recombination proteins [BR:sanh03400]
    107661722
DNA replication proteins [BR:sanh03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    107661722
DNA repair and recombination proteins [BR:sanh03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     107661722
    BRCA1-C complex
     107661722
   NHEJ (non-homologous end-joining)
    MRX complex
     107661722
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook AAA_21 AAA_15 SbcC_Walker_B SMC_N Intein_splicing AAA_29 UPF0231 AAA_13 AAA_16 AAA_22
Other DBs
NCBI-GeneID: 107661722
NCBI-ProteinID: XP_016306955
UniProt: A0A671KVQ3
LinkDB
Position
Unknown
AA seq 1312 aa
MSKIEKMSILGVRSFGVEDKDKQVITFFSPLTVLVGPNGAGKTTIIECLKYITSGDFPPG
SKGSTFVHDPKDAHETDVQAQIRLQFIDVNGDPLDVQRSMQSTQKGKKTEFKTLEGVIKR
FKHGKKVSLIHKCAEMDREMISALGVSKAVINHVIFCHQEESNWPLSEGKALKQKFDDIF
SATRYIKVLETLRALRMKQASTVKTCQTELKYLKQNKDKAQEIRELLSTKEAQLVSSKES
VQRIESQIDPLENRMNDIDSSLSKVMKLDIDIKALDSRKKQMEDDNRELEEKMEQVFHGT
DDQLQDMYQNHQRNVKEKERRLAECQHDLERAGRECQRMNCIKSDLLVEQGRLQLEADRH
TQNIKKRVTQVKSLASFLELEGYDRTTLNERQLQSFHRQVKERLDQDTEALNQTMHDMQE
KEAQKQQSIDDLRDKKTGLERTIELKRDIQAKKQQELKNIKFDLQRLEGSSSRLQELETE
LQKAERELDNAVQACTVDSLKVEVVELQKEKTELDQAQRKLDQEMELLNTHTAARTQMDM
LKKTKMEKEEQVRTISSRHNEELVSLMGHFPSKKELEDWIYSKSKEINSTRDRLNKMNKE
LASGEQKKTHFTAEVKRKEEQLASYEERLFSVCGSQDFESDLDKLEDELEKCSKQRAMLA
GATAVYSQFISQLTEECEPCCPVCQRVFPSEAELQDIINDMQSKLRLVPDKLKNTEHDLK
RKERRRDEMMALKPIRQSIAELQEKELPELRNKLQLVNRDIEKLKEDTEEQETLLCTLMS
EEDTAKACLQEISHMDRYQLDLKDVERKIAQHAARLQGVDLSRSMQQVSQEKPETQHRLD
TTCSKIELKRKLIQDQQEQIQALRSSVNEIRGEKLQISSNMQKHQQLEEQCVEFSTEIQT
LHRDIRDAKEQVSPLAATLEKLQQEKQDHAERRRQKQEEGQEKINGIKEKVKNLTLLERE
ITKYIEEGKDSYKEQKETELQEVDKQLHEAEKQRDKINKDIGNIRQDIDTQKVQERWLQD
NLTLQKRVEELKEVSRKREDLVKEMGNMQVLQLRNERQEVERKLEDLKKNHSVALGRQKG
YKDEILRFRKELSEDQYCRAEDLYRDQMIVMRTTELANKDLDIYYKALDRTIMKFHSMKM
EEINKIIRDLWRSMYRGQDIEYVEIRSDVDENTSAGLKRRTYNYRVVMVKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQC
NFQLLVITHDEDFVELLGRSNYVEHFYRIRKNQDQCSEITKCNINTLNSYLH
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgtctaagatcgaaaagatgagtatcctgggagtaaggagttttggagttgaggataaa
gacaaacaagtgatcaccttcttcagccctctgacggtccttgtggggcctaatggagct
ggaaaaacgaccatcatcgaatgtctcaagtacatcacttcaggagactttccaccagga
agtaaaggaagcacattcgtccatgatcccaaagatgcccatgagacggatgtacaggca
cagatcagactccagtttatagacgtgaatggcgatcctttggatgtccagaggtctatg
caaagcacacagaagggcaagaaaacggagttcaaaacccttgagggtgtcattaaaaga
ttcaagcacggaaagaaagtgagcctgatccataaatgtgctgaaatggaccgtgagatg
atctcagcactgggcgtctccaaggctgttatcaaccatgtcatcttctgccaccaagag
gagtccaactggcctctcagtgaaggaaaggccctcaagcagaagtttgatgacattttc
tcagccacaaggtacattaaggtattggagaccctgcgggcactgaggatgaagcaggcc
agcactgtcaaaacctgccagacggagctcaagtacctgaaacagaacaaagataaagcc
caagagattagagagctgctgtccactaaagaggctcagctggtttcctctaaagaaagt
gtccaacgcatcgaaagtcagatagacccactggagaatcgaatgaatgacatagacagt
agcctcagcaaagtgatgaagttggatattgacatcaaagctttggacagcaggaagaaa
cagatggaggatgataaccgggaactagaggaaaagatggaacaggtgttccatggcaca
gatgatcagctgcaggacatgtatcagaaccaccagaggaatgtgaaggagaaggaacgg
agacttgcggagtgccagcatgatcttgaacgtgccggccgagagtgccagaggatgaac
tgcatcaaatctgacctgctagttgagcaaggccgtctgcagttggaggcagatagacac
acacaaaacattaaaaagagggtcacccaggtcaagagtttagcatctttcctggagttg
gagggttatgaccggaccactcttaatgagcgacagctccagagcttccacagacaagtc
aaagagagactggaccaggacacagaggcccttaaccaaactatgcatgatatgcaggag
aaagaggcacagaagcagcaaagcatcgatgatctccgagataaaaagacaggtctagag
agaaccattgagctgaagagagacatacaggccaagaaacaacaggaactgaaaaacatc
aagtttgacctccaaagactggagggctcctcaagcagactacaggagctagaaactgaa
cttcagaaagcggagcgtgagcttgataatgccgtacaggcctgtacggtggacagtcta
aaggtagaggtagttgaactacagaaggagaaaactgaactggatcaggcccagcgcaag
ctagaccaggagatggaattactcaacacacataccgcggcacgcacacagatggacatg
ctcaagaagaccaagatggaaaaagaggagcaagtgaggacgatcagttcgagacataat
gaagagctggtgtctctgatgggacacttcccaagcaagaaagagctagaagactggatc
tactccaaatccaaagagatcaactccaccagagaccggcttaacaaaatgaataaggag
cttgcatctggagaacagaagaagactcactttactgcagaagtcaaacgtaaggaagag
cagctggccagctatgaagagagacttttcagtgtgtgcggcagtcaggactttgagtcg
gacttggacaaactggaggatgagttggagaagtgttccaaacagagagctatgctggcg
ggtgccacagccgtgtacagtcagttcatcagtcagctgacggaggagtgcgagccctgc
tgtcccgtgtgtcagcgtgtgttcccgtcagaggcagagctccaagacatcattaatgac
atgcagtccaagctgcggctcgtcccagacaaactaaagaacactgagcatgacctgaag
aggaaggagcgcaggcgtgatgaaatgatggcactgaagcccatcaggcagtccatagcg
gagctccaggagaaagagctgccagagctcagaaataaactccagcttgtgaatcgagac
attgagaagctaaaagaagacactgaggagcaagagaccctgctgtgcacactgatgtct
gaggaagacacagccaaggcctgtctgcaggaaatatcacacatggatcgctatcagctt
gacctgaaggatgtagaaaggaagatcgctcaacatgcagccaggctgcagggagttgac
ctcagccgctccatgcagcaggtcagccaggagaaaccagagacccaacaccgcctggac
accacctgcagtaagatcgagctgaagaggaagctgatccaggaccagcaggagcagatc
caggccttgaggagcagtgtaaatgagattcgtggagaaaagctccagatctccagcaat
atgcagaaacatcaacagttggaggagcagtgtgtggagttctccactgagatccaaaca
ctccacagagacattcgagatgcaaaggagcaggtgtctcctctagctgccactctggag
aagctccagcaggagaaacaggaccatgctgagcgcaggagacagaaacaggaggaagga
caggaaaagataaatggaatcaaggaaaaagttaaaaacttgaccctccttgaaagagag
attaccaagtacatagaagagggcaaggacagctacaaagagcaaaaagaaactgagcta
caagaggtggacaaacaactacacgaggctgaaaaacagcgagacaagatcaataaagac
attggcaacattcgacaagatattgacactcagaaggttcaagagcgctggctacaggac
aacttgaccttacaaaagcgagtggaggagctgaaagaggtgtccaggaaacgtgaagac
ttggttaaggagatgggcaacatgcaagttctgcaactgcgcaatgagcggcaagaagtg
gaacgaaagttggaggacctaaaaaagaaccacagtgtggctctcggtcgacagaaaggc
tacaaagacgagatcctccgttttcgtaaagagctcagtgaggatcaatattgccgggcc
gaggatctctacagagaccaaatgattgtgatgagaacaacagagttggccaataaggac
ctggacatctactataaagccctagaccgaacaataatgaagtttcacagcatgaagatg
gaggagattaataaaatcatcagagatctatggcggagcatgtacagaggacaagacatt
gagtatgtggagatacgctctgatgtggatgagaacacctccgctggcctgaaaagaagg
acctataactatagagtggtaatggtcaaaggagacactgctttggacatgcgtggacgt
tgcagtgctggacaaaaggttcttgcctctctcataatacggttggctctggctgagacg
ttttgtctgaactgtgggattctggcgctggatgagcccaccaccaacctagacagagag
aatatagagtctttggcacacgcactggtggagataatcaagagtcgttctcgccaatgc
aacttccagctccttgttatcacccacgatgaggattttgtggagctcctgggacggtcc
aactatgtggagcatttctacaggatcaggaagaaccaggaccagtgctcagagatcacg
aaatgtaacatcaacactctcaactcctacctgcactga

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