Sinocyclocheilus anshuiensis: 107662035
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Entry
107662035 CDS
T04917
Name
(RefSeq) THO complex subunit 3-like
KO
K12880
THO complex subunit 3
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03013
Nucleocytoplasmic transport
sanh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107662035
09122 Translation
03013 Nucleocytoplasmic transport
107662035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107662035
03041 Spliceosome [BR:
sanh03041
]
107662035
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107662035
Spliceosome [BR:
sanh03041
]
Complex C
Other components
EJC/TREX
107662035
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107662035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
eIF2A
Beta-prop_Vps41
Beta-prop_WDR36-Utp21_1st
WD40_RFWD3
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
RMC1_N
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Tricorn_2nd
Beta-prop_ACSF4
Beta-prop_NUP159_NUP214
B-prop_COPA_B_2nd
Beta-prop_WDR75_1st
Beta-prop_SPT8
PD40
Beta-prop_EIPR1
Beta-prop_WDR41
Peptidase_S9_N
Beta-prop_NWD2_C
Beta-prop_Nup120_160
PROPPIN
Cytochrom_D1
Beta-prop_ELP1_1st
Beta-prop_WDR11_1st
WD_LRWD1
DPPIV_N
Beta-prop_SCAP
YNCE
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
107662035
NCBI-ProteinID:
XP_016307380
UniProt:
A0A671Q9D1
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MASSYHQEMQEVFRNNNKSREFPAHNAKVHSVAWSCDGKRLASGSFDKTASVFVLEKDRL
VKENNYRGHGDSVDQLCWHPTNPDLFVTASGDKTIRIWDVRTTKCMATVSTKGENINICW
SPDGQTIAVGNKDDVVTFIDAKTHRPRAEEQFKFEVNEISWNNDNDMFFLTNGNGCINIL
SYPDLKLIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDVEELVCVRCFSRLDWPV
RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEIQCESPTFTVAWHPKRPLLAYACDDK
EGKYDSNREAGTVKLFGLPNDS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcatatcatcaggagatgcaggaggtcttcaggaataacaataaaagcaga
gagttcccggctcataatgctaaagtgcactcggtggcctggagctgcgatggaaaacga
ctggcgtccggatcatttgacaaaaccgccagcgtgtttgtcctggaaaaagaccgactg
gtgaaggaaaacaactaccgagggcatggagacagtgtggatcagctgtgctggcatccc
accaaccctgatctgttcgtcaccgcatcaggagacaagaccatccgcatctgggacgta
cggaccaccaaatgcatggccacggtcagcaccaaaggggagaatatcaacatttgttgg
agtcctgatggtcagaccattgctgtcggcaacaaggatgatgttgtgaccttcattgat
gccaagacgcaccgtccccgtgccgaggagcagttcaagtttgaggtcaatgagatctcc
tggaataatgacaatgacatgttcttcctgacgaacggaaatggctgtattaatatatta
agttaccctgatctcaagctcatacagtcaattaatgcccatccgtccaactgcatctgc
attaaatttgatcccacgggcaagtattttgccacaggaagtgcagatgcgctagtcagc
ctgtgggatgtggaggagctggtgtgtgtgcgctgcttctccagactcgactggcctgtg
cggacgcttagtttcagtcatgatgggaaaatgctggcgtcagcctctgaggatcatttc
attgacattgctgaagtagagacgggtgagaagctctgggagattcagtgcgagtctccg
accttcactgtagcgtggcatccgaagagaccgctgctggcgtacgcctgcgacgataaa
gagggcaaatatgacagcaaccgagaggcagggaccgtcaagctctttggacttcccaat
gactcctga
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integrated database retrieval system