KEGG   Sinocyclocheilus anshuiensis: 107662035
Entry
107662035         CDS       T04917                                 
Name
(RefSeq) THO complex subunit 3-like
  KO
K12880  THO complex subunit 3
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03013  Nucleocytoplasmic transport
sanh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107662035
  09122 Translation
   03013 Nucleocytoplasmic transport
    107662035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sanh03019]
    107662035
   03041 Spliceosome [BR:sanh03041]
    107662035
Messenger RNA biogenesis [BR:sanh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107662035
Spliceosome [BR:sanh03041]
 Complex C
  Other components
   EJC/TREX
    107662035
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107662035
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_EML eIF2A Beta-prop_Vps41 Beta-prop_WDR36-Utp21_1st WD40_RFWD3 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N RMC1_N Beta-prop_HPS5 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Tricorn_2nd Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 B-prop_COPA_B_2nd Beta-prop_WDR75_1st Beta-prop_SPT8 PD40 Beta-prop_EIPR1 Beta-prop_WDR41 Peptidase_S9_N Beta-prop_NWD2_C Beta-prop_Nup120_160 PROPPIN Cytochrom_D1 Beta-prop_ELP1_1st Beta-prop_WDR11_1st WD_LRWD1 DPPIV_N Beta-prop_SCAP YNCE Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 107662035
NCBI-ProteinID: XP_016307380
UniProt: A0A671Q9D1
LinkDB
Position
Unknown
AA seq 322 aa
MASSYHQEMQEVFRNNNKSREFPAHNAKVHSVAWSCDGKRLASGSFDKTASVFVLEKDRL
VKENNYRGHGDSVDQLCWHPTNPDLFVTASGDKTIRIWDVRTTKCMATVSTKGENINICW
SPDGQTIAVGNKDDVVTFIDAKTHRPRAEEQFKFEVNEISWNNDNDMFFLTNGNGCINIL
SYPDLKLIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDVEELVCVRCFSRLDWPV
RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEIQCESPTFTVAWHPKRPLLAYACDDK
EGKYDSNREAGTVKLFGLPNDS
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcgtcctcatatcatcaggagatgcaggaggtcttcaggaataacaataaaagcaga
gagttcccggctcataatgctaaagtgcactcggtggcctggagctgcgatggaaaacga
ctggcgtccggatcatttgacaaaaccgccagcgtgtttgtcctggaaaaagaccgactg
gtgaaggaaaacaactaccgagggcatggagacagtgtggatcagctgtgctggcatccc
accaaccctgatctgttcgtcaccgcatcaggagacaagaccatccgcatctgggacgta
cggaccaccaaatgcatggccacggtcagcaccaaaggggagaatatcaacatttgttgg
agtcctgatggtcagaccattgctgtcggcaacaaggatgatgttgtgaccttcattgat
gccaagacgcaccgtccccgtgccgaggagcagttcaagtttgaggtcaatgagatctcc
tggaataatgacaatgacatgttcttcctgacgaacggaaatggctgtattaatatatta
agttaccctgatctcaagctcatacagtcaattaatgcccatccgtccaactgcatctgc
attaaatttgatcccacgggcaagtattttgccacaggaagtgcagatgcgctagtcagc
ctgtgggatgtggaggagctggtgtgtgtgcgctgcttctccagactcgactggcctgtg
cggacgcttagtttcagtcatgatgggaaaatgctggcgtcagcctctgaggatcatttc
attgacattgctgaagtagagacgggtgagaagctctgggagattcagtgcgagtctccg
accttcactgtagcgtggcatccgaagagaccgctgctggcgtacgcctgcgacgataaa
gagggcaaatatgacagcaaccgagaggcagggaccgtcaagctctttggacttcccaat
gactcctga

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