Sinocyclocheilus anshuiensis: 107662456
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Entry
107662456 CDS
T04917
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04510
Focal adhesion
sanh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107662456
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107662456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
EGF_Teneurin
DUF7652
ATG17_like
Motif
Other DBs
NCBI-GeneID:
107662456
NCBI-ProteinID:
XP_016307973
LinkDB
All DBs
Position
Unknown
AA seq
1785 aa
AA seq
DB search
MLLQFATLLILGAWALADVPELGDVCTEGSCYPATGDLLIGRAHQLLATSTCGLQKPEPF
CIVSHLQEEKKCFVCDSRETYDESMHHITSHRIENVVTTFGPNRLKTWWQSENGLENVTI
QLNLEAEFHFTHLIMTFRTFRPAAMVIERSADFGKTWEVYRYFAYDCEASFPIVSQGPMT
KVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNMLKITNLRVKFTKLHTL
GDNLLDSRIEIKEKYYYSVYDMVVRGNCFCYGHASECAPIDGAGEVVDGMVHGHCMCNHN
TMGLNCERCQDFYHDLPWRPAEGRNTNACKKCNCNHHSDSCHFDMAVYKASGNVSGGVCD
DCKHNTMGHKCEQCKPFFYQHPEKDIRDPSICEPCNCDPVGSHNGGVCDPLTDVSLGLIA
GQCRCKPNVEGERCDQCKQGHYGLSDDPLGCQSCTCNALGTVPGGSPCDTDSGNCYCKRL
VTGRNCDQCLPQHWGLSNDMDGCRPCDCDHGGAINNNCSPETGQCQCREHMFGRRCDQVE
SGFYFIALDHYTYEAEDAKFGPGVTVVPRPQPQDRSPTWTGIGFVNVPEGAYLEFSIDNI
PYSMEYDIIIRYEPQLPEQWEEVLMTVIRPRVITANSRCANTMPDDDNQVVSLHPGSRYV
VLSRPVCFEEGLNYTVRLSLTRYSALSDVQSPYTLIDSIVLMPHCKNLDIFSGSGSEGGD
LVTNSAWETFQRYRCLENSQAVVKTPMTDICRNYIFSMSALLHEGVKACQCDPQGSLSTV
CDPSGGQCQCRPNVVGRNCDKCAPATFLFGPQGCRPCDCSPEGSVHSFCHEASGQCECIP
GAYGRQCDRCLPGHWGFPNCRPCTCNGHAEQCDPHTGQCLSCRDHTTGHNCERCLNGYYG
DPVLGSGDHCRPCMCPDGPGSGRQFSGTCYKILDSNQVFCVCNQGYKGARCEECTPGYYG
NPHEVGGECRPCQCNNNIDMMDPESCDARTGACLKCLYHTEGEGCNRCKLGYYGNALTQS
CRKCVCNHMGTVKEMCPSPGNCNCDLNSGQCQCLPNVVGQHCDQCAPDTWNIGSGKGCEA
CDCDLNHSFSSSCNEIMGQCSCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGIAEQQ
CNKATGHCVCVEGVSGPRCDTCARGYTGEFPHCERCHQCFAEWDVIVGDLTNQTHRLVQK
VNTIKATGITGPYQATINNVESNANSIRNILAQNPATQPLTEIQGLLEQATSLMAKMNTN
LNLTEETLSEISSDNNSTDTKLNSLKEEAQKLEQTVKDLQEQVEFVKNSDIRGARASMTR
YYEQSQMAEIRANASTIDPYNLVNQSATLRTETEDLMNQTKEEFIQRQDEFSKKLDNLAG
QLETLDLSELSEKTCGSLAGSENCADSPCGGLSCVNVEGNRKCGGEGCDGLTMLAHNAWQ
RAKDFDLEIISAMEEVDKLSKMVSEAKLKADEAKLNAQEVLAKTNENKKRVDGSNEELRQ
LIKQIRDFLTQDGADLESIEAVASEVLQMQMPTTPAQLQNLTAEIRERVGSLMDVEDILN
QSAADILRAESLLEQARKSRKEATDMKDTAEMVKEALQQAERAQSSITEALKQATADIKG
TQDLLVSVESETSDSELKLSNSTRKLLKLESDVALLKEKALNTSTSANSTEKEADSINAL
ADQLKKDLDSELKDKYSSVEELITQKSEGVAEAKKRAEKLQQEAKNLLLQASDKLQLLKN
LEKSYDENQKLLEDKANELVDLEKAVKELLQEISHKVTVYSTCLF
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgctcttacagtttgcaacccttttaattttaggggcatgggctctggcagatgtgcct
gagctgggagatgtttgcacagaggggagctgttatcctgccacaggagatcttctcatt
ggaagagcgcaccaactcttggccacctccacatgcggactccagaaaccggagcccttt
tgtatcgtcagtcatttgcaggaagagaagaagtgctttgtgtgcgattccagggagacc
tacgatgagagcatgcaccacataaccagccacagaattgaaaatgttgtgactacgttt
ggcccgaaccgcctcaagacttggtggcaatcggaaaatggcctggagaacgtcacaatc
cagttgaaccttgaggcagagttccacttcacccacctcatcatgacctttagaacgttc
agacctgctgccatggtgattgaacgttctgcagacttcgggaagacttgggaagtgtat
cgttacttcgcctatgactgtgaggcctccttccccatcgtctctcaaggacccatgacc
aaagtggatgatgttatctgcgattctcgctactccgacattgaaccctcaacagagggt
gaggtcatctttagggttttggatccagccttcaggattgatgatccttacagccccaga
atccaaaacatgttaaagatcactaatctgagggtgaagttcactaagctgcacactctt
ggggacaatcttctggactcacgtatagagatcaaggagaagtactactactcagtctac
gacatggtggtcagaggaaactgtttttgctatggtcacgcatctgaatgcgcccccatc
gatggagctggagaggtcgtggatggcatggtccatggccattgtatgtgtaatcataac
actatgggtctaaactgtgagcgctgtcaggacttttaccatgacctgccctggaggccc
gcagagggacgcaacaccaacgcctgtaaaaagtgtaactgcaatcatcactctgattcc
tgtcatttcgacatggccgtgtataaggcgtcgggtaacgtgagcggcggtgtgtgcgac
gactgcaagcacaacaccatgggtcacaagtgtgaacagtgcaagccgttcttctaccaa
catccagagaaagacatccgcgaccccagcatctgcgaaccctgtaactgtgatccggtt
ggctctcacaacggtggagtgtgtgatccgctcacagatgtgtctctcgggctgatcgcg
ggtcagtgtcgctgtaagcctaatgtggagggtgaacgctgtgaccagtgcaaacagggc
cattacggactcagtgacgaccctctgggatgccagtcatgcacatgcaatgctttgggg
acggttccaggtggaagcccatgcgatacagactcaggaaactgctactgtaaacgtctg
gttaccggaaggaactgtgaccagtgtctgcctcagcactggggtctcagtaacgacatg
gatggctgcagaccatgtgactgtgatcatggtggcgcaatcaacaacaattgctctcct
gaaacgggtcagtgtcagtgtcgcgagcacatgtttggcaggcgctgcgaccaagtagaa
tctggtttttacttcattgctctggaccactacacttatgaagcagaggacgccaagttt
ggacctggtgtgacggttgtcccgagaccccagcctcaggacagatcccctacttggact
ggcattggttttgtaaacgttcctgaaggtgcctatcttgagttcagcatcgacaacatc
ccctactctatggagtatgacattatcatccgatatgaacctcagctgccagagcagtgg
gaagaagtgttgatgactgtcatcaggcctcgtgtcattaccgccaacagccgctgtgca
aacacaatgcccgacgatgacaaccaggtggtgtctctgcatcccggctccaggtatgtg
gtgctgtctaggcctgtgtgttttgaagaaggcttgaactacaccgtgcgtttgagtctg
actcgctactcggctctcagtgatgtgcagtcgccgtacacgctcattgactcgatcgtc
ctcatgccacactgcaaaaacctagatattttctctggctctgggtcagagggtggggac
ttggtgaccaacagcgcctgggaaaccttccagcgctaccgctgtttggagaacagccaa
gcggtggtgaaaacccccatgactgatatctgcagaaattacatcttcagcatgtcggct
cttctgcacgagggagttaaagcctgtcagtgtgacccacaggggtctctcagcacggtt
tgtgacccaagcggtggccagtgccagtgtcgtcccaacgtggttggcagaaactgcgac
aaatgtgccccagcgaccttcctttttggtccgcaaggctgcaggccatgtgattgcagt
cctgaggggtccgtccactctttctgccatgaggccagcggtcagtgtgagtgtattcct
ggagcgtatgggcggcagtgcgaccgctgtctgcctggacactggggtttccctaactgt
cgcccctgcacttgcaatggccacgctgagcagtgcgacccacatacaggacagtgtctg
tcctgcagggaccacaccactggacacaactgcgagaggtgtttgaatgggtactatggt
gaccctgtcctgggctctggagaccactgccgcccctgcatgtgtccggacggtcccggc
agcggcagacagttctccggcacgtgttataagatcctcgactctaaccaggtgttctgc
gtctgcaaccagggatataaaggtgccaggtgtgaagaatgcacccctggttattacgga
aacccacacgaggtgggcggagaatgccggccctgtcagtgcaacaacaacattgacatg
atggacccggagtcctgtgacgcccgtacgggcgcttgtctcaaatgcctgtaccacaca
gagggcgagggctgcaaccgctgcaagctcggttattacggcaatgctctgacacagagc
tgcaggaagtgtgtgtgtaatcatatgggcactgttaaggagatgtgcccctctccgggt
aactgcaactgtgacttaaacagcggccagtgtcagtgccttcccaatgtggtgggccag
cactgcgatcagtgcgcaccggacacgtggaatataggcagcgggaaaggctgtgaggcc
tgcgactgcgacctcaaccattcattcagctcctcctgcaatgagattatgggccagtgc
tcttgtaaacctgggtttggcggcagaacctgccgagagtgtagagagctgttctgggga
aaccctgaggtcaaatgccacgcatgtgattgtgacccaagaggcatcgcagagcagcag
tgcaacaaggccacaggtcactgtgtttgcgtggagggcgtttccgggccccgatgtgac
acgtgcgctcgaggctacacaggcgagttcccacattgtgagcgctgccaccagtgcttt
gccgaatgggatgtaattgtgggcgacctcaccaaccagacccatagactggtccagaag
gtcaataccatcaaagccactggcattacaggaccctaccaggccaccatcaataacgtt
gaaagcaacgccaactcaatccgcaacatcttggctcagaatccagccactcagccttta
acagagatccagggacttctcgaacaagcaacttccttaatggctaaaatgaacaccaac
cttaacctgacggaggagaccttgtccgagatctcatccgacaacaacagcacggacacc
aaactgaactccctcaaagaagaagctcagaaactggaacagacagtgaaagaccttcag
gaacaggtggagtttgtgaagaattcagacattcgaggggccagagccagcatgactcga
tactatgagcagtcccagatggcagagatccgtgcgaatgcctccaccattgacccatac
aacctggtcaatcaatctgccaccctgcggacagaaacggaggacttaatgaaccagaca
aaagaagagttcattcaaaggcaggatgagttttcgaagaaactggacaacctcgctgga
cagctggagactctggacctttctgagcttagcgagaagacatgtggcagtctagctggc
tcagagaactgtgccgactccccctgcggaggcctgagctgtgtgaatgtggaaggaaac
aggaagtgtggaggagagggatgtgatggcctcaccatgctggcccacaatgcctggcag
agagccaaggacttcgacctagagattatcagcgctatggaggaagtggacaagctctcc
aaaatggtgtcagaggcaaagttaaaagcagatgaagcaaagcttaatgctcaagaagtg
ctagcaaagactaatgaaaacaaaaaacgagtggatggcagcaacgaggagctacgccag
ctcatcaaacagatccgagacttcctcactcaagatggagcggacctggaaagcatcgag
gctgtggccagtgaagttctgcagatgcagatgcccaccactccagcccagctgcagaac
ctgaccgcagagatcagggaacgcgtgggcagcttgatggacgtcgaggacatcctcaac
cagagtgccgccgacatcctgagagcagaaagcttgctggaacaagcccgcaagtccagg
aaggaggcgaccgatatgaaagacacagctgagatggtgaaggaggccttgcagcaggct
gagcgtgcccagagttcaataaccgaggcactgaaacaggccactgctgacatcaaggga
acgcaagacttgctggtctcggtggagtcagagacgtccgactcagagctaaaactgagt
aactccacccgaaagctcctgaagttggaaagcgatgtagctctgctgaaagaaaaggct
ctcaacacctccaccagtgccaacagcacagagaaagaggctgatagcatcaatgcactg
gctgaccagctcaaaaaggatttggattcagagctgaaagacaagtacagtagtgttgag
gagctgatcacacagaagtctgaaggagtggcagaggccaagaaaagagcagagaaactc
caacaggaagccaaaaatctgctgctacaggccagcgacaaacttcagcttctgaaaaat
cttgagaagagctatgatgaaaatcagaagctgctggaggacaaggccaatgagctggtg
gatctggagaaggctgtgaaagaactgcttcaggagatcagtcacaaagtcaccgtctac
agcacctgtctgttttaa
DBGET
integrated database retrieval system