Sinocyclocheilus anshuiensis: 107665400
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Entry
107665400 CDS
T04917
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107665400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107665400
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107665400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
107665400
NCBI-ProteinID:
XP_016311761
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSTKEVIEKTTDDETDWLYGDDNFDEEETTEKEVFSALIGDVDGVSGLNYQESESDSDDD
VCVTIGDIKTGGSQGSSFGSSSISLNIKTSVSGSKSRGLDLDAEGNVLQVDVESFEEKPW
RKPGADLSDYFNYGFNEDTWKAYCDKQRRLRMSLEILSLGSLSKIMVHQSSSSDLSEHST
RKSSGAINVIGGQAGTISRVEGRRRHSADENNIQVVSEQSSDTELSSPKLLPFFPPNIPP
PPFPPPSISTTLPLIPPPGFPLPPGAPPPMIPPLDSSGRLAGGYDRRSATPYPFPAGVYT
PVVGVASWSGVIDSSKAWENYTRHNKERVRERARERGHTKDQEREKERYRETDREHSPST
QDHRSEEERVSRHRDHRHHGSERYQESSGREGVRDRHRERRHRDRNEQHRSSRSGSSRRR
HDSDDADSHRRHRHKRSKHNRGSLEPSEECNVDQENQSEATE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaaaagaggtaatagagaaaacaactgatgacgagacggactggctttatgga
gatgacaattttgacgaagaagagacaacagaaaaggaagttttcagtgctctgattggt
gatgttgatggagtgagtggactcaattaccaggaaagtgaatcagacagtgatgatgat
gtctgtgtgaccatcggtgacattaaaacaggcggatctcagggctcgtcatttggttct
agttccattagtctgaacataaagacctctgtatcaggctccaagtccagagggctggat
ctggatgctgaaggcaatgtcctgcaggtggatgtggagtcctttgaggagaagccatgg
agaaagccaggtgcagatctgtctgactactttaactatggttttaatgaggacacctgg
aaggcatactgtgacaaacagagacgactacgcatgagcctagagatcctgagcctgggg
tcattaagcaaaataatggttcatcagagttctagtagtgatctttcagaacactcaacc
aggaagtcgagtggtgcgatcaatgttatcggaggacaagcagggaccatcagtcgagtg
gaaggcagaagacgtcacagcgctgatgaaaataacatccaggttgtttcagagcaatcc
tcggacacagagctatcttccccaaagctgttgcccttctttcctcccaatatcccacct
ccacctttccctcctccctccatcagcaccacactccccctcataccaccacctggtttc
ccattacctcccggggcccctccacctatgataccaccattagatagcagtggacgtttg
gcgggaggctatgatcgacgctcagctacaccttaccccttccctgcaggtgtgtataca
cctgtggtgggcgtggcttcatggtcaggtgtgatagacagcagcaaggcgtgggaaaac
tacacccgtcataacaaagaaagggtgagagagagagccagagaaagaggacacacgaaa
gaccaagagcgggagaaagagcgatatagagaaacagatcgagaacacagcccctccacc
caagaccacagaagtgaggaggagcgtgtgtctcgacacagggatcaccgtcatcacgga
agcgagaggtaccaagaaagctcgggaagagaaggagtgagagacagacatcgagaaaga
agacacagagacaggaatgaacaacacagatcctcacgcagtgggagcagtaggaggcgt
catgatagtgatgacgcagatagccacaggagacacaggcacaaacgctctaaacacaac
cgaggaagccttgagcccagcgaggagtgcaatgtggaccaggagaaccagtcagaggcc
acagaataa
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