Sinocyclocheilus anshuiensis: 107665696
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Entry
107665696 CDS
T04917
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107665696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107665696
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107665696
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107665696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
107665696
NCBI-ProteinID:
XP_016312166
LinkDB
All DBs
Position
Unknown
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADQHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVCLITKPNFISTLCYAIDNPLHYQKSLKPSPHLFTQLSKVLK
LSKVQEVIFGLALLNSSNADVRGFAAQFVKQKLPDLLRSYVDADLGGNQEGGFQDIAIEV
LHLLLSHLLFGQKGSSGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPDKRDILMDRIL
PDSGELNKTMMESSLADFMQEVGYGFCASLEECRNIILQYGVREVTASQVARVLGMMART
HSGLSDGIGLQSISNPVGGGIWSDGKDKSDGSQAHTWNVEVLIDVVKEVNPNLNFKEVTY
ELDHPCFLIRDSKGLQIVVCGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLMSPEVF
CFVDYPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGHYEQVKQLFSFPIKH
CPDMLVLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIM
HSMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDK
WLTDKIREHGEPFIQACVTFLKRRCPSIMGGLVPEKDQPKSAQLPPETLATMLACLQSCA
GSVSQELSETILTMVANCSNVMNKARQPPPGVLPKGRAPSTSSLDAISPVQMDPLSAMGS
LSLGVSSTSHTPSMQGFPSLQGSAFSNPQSPAKAFSNLPNPNPSTAFPGINPLSSQLQGP
LSSSLTGIGSGLGMPAVSSDPFGTRKMSTPGLNPSTFQQTDLSQVWPEANQHFSKEIDDE
ANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYRFFPQYPD
KELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKD
YPQYCQHLASIAHFLQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSLALAQAQAQSQTP
KAPLPGQASTLVTTATTTTTTAKTTTITRPTAVGPKKDVPPSINTTNIDTLLVATDQTER
IVEPPENVQEKIAFIFNNLSQSNMSQKVEELKETVKEEFMPWVSQYLVMKRVSIEPNFHS
LYSNFLDTLKNPEFVKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITLAKN
KPILYTDLELKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSVIFRPQNPWTMGIMNVLA
ELHQEHDLKLNLKFEIEVLCKNLSLDISELKPGNLLRDKEKLKNLEEQLSAPKKETKPPE
EMLPIVTTGVDSVPFTAAPSTPATTTTCTATGPPTPQFSYHDINVYALAGLAPHININVN
IPLLQAHPQLKQCVRPAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESHMRV
AAHHMMRNLTAGMAMITCREPLLISIATNLKNSFAAALRAPTPQQREMMEEAAARIAQDN
CELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPMVLTYQAERMPEQIRL
KVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQAWPTDDVAHIYDKCISD
LEQHLHAIPPALAMNPQTQAIRSLLEAVVMARNSRDGIAALGLLQKAVEGLLDATSGADP
DLLLSYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVN
MQQYDLHLAQSMENGLNYMAVAFAMQLVKLLLVDERSVSHITEADLFHTIETLMRTNAHS
RANAPEGLPQLMDVVRSNYEAMIDRHHGGPNFMMHSGISQASEYDDPPGLREKAEYLLRE
WVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQ
HPTTSPAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVGMLTMVLGIVVGV
LIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELNKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQVSNEPGNRYNIQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANAEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctacctggtggacaattta
actaagaaaaactacagagccagccagcaggaaatacaacatattgtgaatcgtcacggc
cctgaggcagaccagcatttattacgctgtctcttttcccatgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccaccagacacaatttctgatccaggagtgtgtgtgt
cttattacgaaaccaaattttatttcaacgctttgctacgccattgacaatcccctgcac
tatcaaaagagtttgaaaccatcacctcatttatttactcagctgagtaaagttcttaag
ctaagcaaggttcaggaggtgatttttggccttgctctgctgaactccagtaacgcagac
gtccgagggtttgctgctcaatttgtgaagcagaagctccctgacctcctccgctcgtac
gtggacgcagacctcggagggaatcaggaaggtggcttccaggacattgccatagaggtt
ctgcatctgctcctctcccatcttctgttcggccagaagggctcgagcggtgtcggacaa
gagcagattgacgcgttcctcaaaacactgtgcagagatttcccacaggagcgctgtcct
gtggtgctcgcaccactgctgtaccctgacaaacgggacattctcatggaccggatcctg
ccagactctggagaattgaacaagaccatgatggagagttcacttgctgacttcatgcaa
gaagttggctatggcttttgtgcaagtcttgaagagtgcaggaacataatcctgcagtat
ggggtgcgagaggtgacagccagtcaggtggccagagtgctgggcatgatggcccgcact
cactctgggctgtccgatggcatcggcctgcagtccatctcaaatccagtgggtggtggg
atctggagtgatgggaaggacaagagtgacggctctcaggcccacacctggaatgttgaa
gttctaattgatgtggtcaaagaagtgaaccccaatctgaatttcaaagaggtgacctat
gagctggatcacccatgcttcctgatccgggacagtaaggggcttcagatagtggtctgt
gggatccagaggggtctgggaatggaggtgttcccagtggatctcatctacagaccatgg
aagcatgcagaaggacagctgtcattcattcaacactcgctgatgagtcctgaagtcttc
tgctttgttgactatccctgtcatactgttgccattgacatcctgaaggccccacctgag
gatgacaacagagaaatagccacatggaagagcttggacctagtggagagcctcttgcgc
ctctctgaagtcgggcattatgaacaggtgaagcagctcttcagctttcccatcaagcac
tgcccggacatgctagtgctggcgctgctacagatcagcacctcctggcacaccctgcgt
catgagctcatctccaccctcatgcccatcttcctgggcaaccaccccaactctgccatc
atcttgcactatgcctggcatggacagggccagtccccctccatccgccagctgatcatg
cactctatggctgagtggtacatgagaggagagcaatacgaccaggccaagctatcccgc
atcctggatgtggctcaggacttgaagtctctatcgatgctgctgaatggtactccattt
gcctttgttattgaccttgctgcacttgcctctcgccgtgaatacctcaaacttgacaaa
tggctcactgacaaaattcgagagcacggggagccgttcatccaggcgtgtgtcacattc
ctgaagagacgttgtccctctatcatgggtggtttggtcccagagaaagaccagccgaaa
agtgctcaacttcctcctgaaacactggctaccatgcttgcatgtctgcagtcttgtgct
gggagtgtgtctcaagagctgtcagagacaattttgaccatggtggccaactgtagcaat
gtgatgaacaaggcccggcagccaccaccaggagtcttgccaaagggacgagctcccagc
accagcagcttagatgctatttcacctgtgcagatggaccctctctctgcgatgggctct
ttgagtctaggtgtctcgtccacctctcacaccccgagcatgcaaggattccccagcctg
cagggctctgccttcagtaacccccagtccccagccaaagccttctcaaacctgcccaac
ccaaaccccagcacagctttcccaggaatcaaccccctctcttctcagctccaaggtcct
ctgagctcaagcttgactgggattggctcaggtttgggcatgcccgctgtcagcagtgac
cccttcggcaccaggaagatgagcacaccggggctgaacccatccaccttccagcagact
gacctctctcaggtgtggcccgaggcaaaccagcactttagtaaggagatagacgatgag
gcaaacagctacttccagcgcatctacaaccatccgccgcaccccacaatgtccgtggat
gaggtgctggaaatgctgcagagatttaaggactcgaacatcaagcgggaacgggaagtt
tttaactgcatgctgaggaatctgtttgaggagtaccgattcttccctcagtatccagac
aaagagctacacatcaccgcttgcctctttggggggatcattgagaaaggcctggtcaca
tacatggctctgggcttggccttacgatatgtcctggaagccttacgcaaacctttcgga
tcaaagatgtattactttgggatcgctgcactagatagatttaaaaatagactgaaggac
tatcctcagtactgtcagcacttggcgtcaatagcccatttcctgcagtttccgcaccat
ttacaagagtatatagagtatggccagcagtccagagaccctcctgtgaagatgcaaggc
tccattaccaccccaggtagcctggctttagcccaggctcaagctcagtctcagaccccc
aaagcccctctacctggccaggccagcaccttagtgaccacagccaccacaacaaccacc
actgccaaaaccaccaccatcacgagacctacagctgttggaccgaagaaggacgtgcca
ccttcaatcaacaccacaaacattgacaccttgttggtggccacagaccaaactgaaagg
atcgttgagcccccagagaatgttcaggagaagattgcattcatcttcaacaacttatcc
caatcaaacatgtcccaaaaggtggaggagctgaaagagactgtgaaagaagaattcatg
ccctgggtctctcagtacctggttatgaagcgtgtcagcattgagcccaacttccacagc
ctgtattctaacttcctggacacattgaaaaacccagagtttgtcaagatggttctcaat
gagacttacagaaacatcaaggtcctccttacctctgataaggcagctgctaacttctca
gatcgatccctgctgaagaatttgggtcactggcttggaatgatcaccctagctaaaaac
aaacccatcctgtacacagacctggagctgaaatctctcttgctggaggcttatgtgaaa
ggccaacaggagttactgtatgtcgtcccctttgtggccaaagtcttggaatcaagtcta
cggagtgtgatcttcagaccgcagaacccttggaccatgggtatcatgaatgtactggct
gagctccaccaggaacatgacttaaagcttaacctcaagtttgagattgaggtgctctgc
aagaatctgtctttggacatcagtgagctaaaaccaggaaacctactgagagacaaagag
aagctgaagaacttggaggaacagctctctgcaccaaagaaagagaccaagcctcctgaa
gagatgctgcctatagttacaacaggagtagattctgttccatttacagctgctccgtca
actccggccaccaccacgacctgtacggccactggaccacccacaccacagttcagctac
catgacatcaatgtgtatgccttggctggcctggccccgcacatcaacatcaatgttaac
atcccattactacaggcccaccctcagctgaagcagtgtgtgagaccagcaattgagcgt
gctgtacaggaactggttcacccagtggtggaccgatccatcaagattgccatgaccacc
tgtgagcagatagtcaggaaggacttcgcactagactctgaggagtctcacatgcgtgtg
gccgcccaccacatgatgcgtaacctgaccgccggcatggccatgatcacctgcagggag
cctctgctcataagcatcgccaccaacctgaagaacagctttgctgcagctcttagggct
cccacaccccagcagagagagatgatggaagaggcggctgctcgcattgcacaggacaac
tgtgagcttgcttgttgctttatccagaagaccgcagtggagaaagctggaccagagatg
gacaagaggctggcaactgaattcgagctgaggaagcatgctcgccaagaaggccgtcgc
tactgtgaccctatggtgctcacctatcaggctgagcgcatgccagagcagatcagactg
aaggtcggtggagtggatcctaaacagctggctgtttatgaggagtttgcccgtaatgtc
ccaggcttcctacccagtaatgacctgtctcagcccactggtttccttgcccaaccaatg
aagcaacaggcatggcccacagatgatgtggctcacatctatgataagtgcatttcagac
ctggagcaacacctgcatgcaattccacctgccctagccatgaacccacagacccaggcc
atacgcagccttctggaggccgttgtcatggctagaaactcccgtgatggcattgctgcc
ctgggccttttgcagaaggctgtcgagggtctgctggatgccaccagtggcgctgatcct
gatcttttgctgagctacagggagtgccacctactggtgctgaaagccctacaggacggt
cgtgcctacggtccacagtggtgcaacaaacaaatcaccagatgcctgattgagtgcaga
gatgaatacaagtacaatgttgaggccgtagagctcctcattagaaaccacctggtcaac
atgcagcagtatgacttacacctggctcagtccatggagaacgggctaaactacatggcc
gtggcattcgccatgcagctggtgaagctcctactggttgatgaacgtagcgtgagtcac
atcactgaagcggatctcttccacaccattgagacgctgatgaggaccaatgcccactcc
agagccaatgctcctgaaggtttgccccagctgatggatgttgtccgttccaactatgag
gccatgatcgatcgtcaccatggtgggccgaacttcatgatgcactctgggatttctcaa
gcctctgagtacgatgacccaccaggccttagagagaaagcagagtacctgctgagagaa
tgggtcaacctgtaccactcagcagctgcaggaagagacagcaccaaggccttctctgca
tttgttggccagatgcaccagcagggcatcctgaagaccgatgacctcatcactcgcttt
ttccggctgtgcacagaaatgtgcgtggagatcagttaccgcgctcaagccgaacagcag
cacccaaccaccagccccgccatcatcagagccaagtgctaccataacctggatgctttt
gttcggctcattgcgcttcttgtcaaacactccggagaggccaccaacacagtcaccaaa
atcaacctgctcaacaaggttggaatgcttacaatggttctaggcattgtggtgggtgta
ttgatccaggatcacgatgtgaggcagacggagttccagcagcttccgtaccacagaatc
ttcatcatgctcctgctggagcttaacgcaccagagcatgtgctggagaccatcaacttc
cagaccctcactgccttctgtaacacctttcacatcctgaggccaactaaagcacctggt
tttgtctatgcttggctggagctcatctcacaccgcatcttcattgccaggatgcttgcg
cataccccacaacagaagggttggccaatgtatgcccagctgctgatagacttgttcaag
tatcttgcacccttcctaaggaatgttgaactcaacaaacctatgcaaattctctacaag
ggaacacttcgtgtgctgcttgtcctgctacatgacttcccagagttcctgtgtgactac
cattatggtttctgcgacgtcatcccgcccaactgcatccagctgaggaacctgatcctg
agtgccttcccccgcaacatgaggcttccagaccccttcacccctaatctgaaggtggat
atgctgagtgagatcaacatcgctccccgcatcctcactaatttcaccggtgtgatgcca
tcccagtttaagaaggatcttgactcctacctcaagacccgttctcctgtcaccttcctt
tctgagctgcgcagcaacctgcaggtgtccaacgagccaggcaaccgttacaacattcag
ctgatcaatgctctggtgctgtacgttggaacccaggccattgcccacatccacaacaag
ggtagcactccctccatgagcaccatcactcactcggctcacatggacatcttccagaac
ctcgcagtcgatctagacactgagggccgctatctgttcctgaatgcgatagccaatcag
ttgcgttatccaaacagccacacacactactttagctgtaccatgctgtatctgtttgcc
gaggccaacgctgaagccattcaagagcagatcaccagggtcctgctggagaggctaatt
gtgaacaggccgcacccatggggtctgctcatcaccttcattgagctgatcaagaaccct
gcctttaaattctggagccatgattttgtgcactgtgccccagagatcgagaagttgttc
cagtcggtggctcagtgctgcatggggcagaagcaggcccagcaggtgatggagggaacg
ggtgccagttag
DBGET
integrated database retrieval system
