Sinocyclocheilus anshuiensis: 107666662
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Entry
107666662 CDS
T04917
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04010
MAPK signaling pathway
sanh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107666662
04020 Calcium signaling pathway
107666662
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sanh04040
]
107666662
Ion channels [BR:
sanh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107666662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DACND
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
107666662
NCBI-ProteinID:
XP_016313568
LinkDB
All DBs
Position
Unknown
AA seq
1544 aa
AA seq
DB search
GMYQPCENIDCSSKRCQILQAFDAFIYIFFALEMVVKMVALGIFGQRCYLGDTWNRLDFF
IVMAGVVEYSLDLQNINLTAIRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLC
FFVFFVFGIIGVQLWAGLLRNRCYPEENFTLSTGVALPAPYYSPSEEDERPFICSLPQDN
GIMSCSDVPARRVAGHQCCLEVDDLLHHQALGLVTEPFLNASAIAPGLCVNWNRYYTRCH
TGHRNPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVGSF
FMINLCLVVIATQFSETKQREHQLMQEQRATCLSSSTLASLVEPSDCYEEIFQLVCHVLH
KARRRTAAFFRMLCRKPPEQMHMKTNINGGEKRFQQHDGATPSASAANQETEEEAAEEKD
RCMRAEGACRRRSRELWMEMRVKLQGIVESKYFNRGIMVAILINTISMGIEHHQQPEELT
NVLEICNIVFTSMFALEMILKLTAFGFFNYLRNPYNIFDGIIVIISVCEIVGQSDGGLSV
LRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFS
LKTDTGDTVPDRKNFDSLLWAIVTVFQGDANRSYSDDDDDEGSSSNGSEQHKNSLTFSDP
KLSSLTPNGHLDLAPLAEEKTRTDFSEENHRSRTICLGRRSSSLRHSRSSHYHHWGRPPP
QPSWSRRCSWNSVGRSARGLRAGGVIGGSLRVRSVHSNPAEHESLLPHPPFLSRRHRRAL
SLELPELLQCPPLVRKKSVSAEHQDCNGKGPGPQGTLLGEVYPQLNARKDKHDLEEDTEY
SLCFRIQKMMEVYRPDWCEKREDWSIYLFSPQNKFRLLCQTIIAHKLFDYVVLAFIFLSC
ITVALERPRIHQGSLERVFLTISNYVFTAIFVAEMTVKALMSLFVLASKDGWVNIMYHGL
DAVGIDQQPVINNNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEARRRE
EKRLKRMEKRRRKAQRLPYYSSYGRVRRMIHSFCTSHYLDLFITLIICINVVTMSLEHYN
QPQSLETALKYCNYFFSSTFVVETMLKLVAFGFRRFLKDRWNQLDLAIVLLSVMGITLEE
IEISASLPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFVLLF
FIYAALGVELFGELVCNVEYPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRE
CPPGDSYSCNSSLQIISPMYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAE
IEMELAQGGLCCLGHPERSTGADAGERPSIHTNTNTSQSGFTQNQRRLYSSAQENQWLES
VSLLMKDSLDGEMQMIDNLSGSVFHHYCSPAIRRVGRSQSGEIRLAEVEQTSLMSEQLSD
KSSSPALPDDISLDEHSDRKEHGSADLSTGELVCRSVLPQSEACSPGRDRREERREMGHR
GDGCGGDGQMSSPLFHLPAEFFHPTTAAVPQGSPAIGAAQPGSR
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
gggatgtaccagccctgcgagaacatcgactgctcctccaaacgctgccagatcctgcag
gccttcgatgcattcatctacatcttctttgcgctggagatggtggtgaagatggtggct
ctggggatcttcggccagcgctgttatctgggagacacctggaacagactggacttcttc
atcgtgatggccggggtggtggagtattctctggacctgcagaacatcaacctgacggcc
atccggacggtgagagtcctgcggccgctcaaagccatcaacagagtccccagcatgagg
atcctggtgaatctgctgctggacacgctgccgatgttggggaacgtgctgctgctgtgc
ttcttcgtcttcttcgtcttcggcatcatcggtgtgcagctctgggctggacttctgcgc
aaccgctgctatccggaggagaacttcaccctctcaacaggtgtggcactccctgctcca
tactactctcccagtgaggaggacgagaggcccttcatctgctctctgccacaggataat
ggcatcatgtcgtgcagtgacgtgccggcacggcgtgtggcgggacatcagtgctgtctg
gaagtagatgatctcctgcaccatcaggcactgggcctcgtgaccgagcctttcctcaat
gccagcgccatcgcccccggactctgtgtcaactggaatcgatactacacacgctgccac
accggacacagaaacccacacaaaggagccatcaactttgacaacatcggatacgcctgg
atcgttatatttcaggttattactctggagggctgggtggaaatcatgtattacgtcatg
gatgctcactcattctacaacttcatctactttattctgctgattatagtcggctcgttc
ttcatgataaacctgtgtttggtcgtcatagcgacacagttttcagagaccaaacagcgt
gagcatcagctgatgcaggagcagcgagccacctgtctgtcctctagcacgctggcctcg
ctggtcgaacccagcgactgctacgaagagatcttccagctcgtctgccatgtcctccac
aaggctcgcagacgcactgctgcctttttcaggatgctctgccgcaaaccaccggagcag
atgcatatgaaaacaaacatcaacggaggagaaaagcgcttccaacaacatgatggagcc
acaccttccgcctcagcagccaatcaggagacagaggaggaggcagccgaggagaaagac
aggtgcatgagggcagagggggcgtgtcggaggcggagcagagagctgtggatggagatg
agggtcaaactgcagggcatcgtggagagtaaatacttcaacagaggaatcatggtggcc
atcctcatcaacaccatcagcatgggcatagagcatcatcagcagccggaggagctcact
aatgttctggagatctgtaacatcgtcttcaccagtatgtttgctctggaaatgattctc
aagctcacagcattcggcttctttaattacctgcgcaatccgtacaacatctttgatggg
atcattgtgatcatcagcgtgtgtgagatcgtgggtcagtctgacggcggtctctcggtg
ctccgcaccttccgcttgctgcgggtcctgaagctggttcggttcatgccggcgctgcgc
agacagctggtggttctgatgaagaccatggacaatgtggccacattctgcatgctgctg
atgctcttcatcttcatcttcagtattttgggaatgcatatattcggctgcaagttcagt
ctgaagacagacactggagacacggtcccggacagaaagaactttgactctctgctgtgg
gcgatcgtcactgtgtttcagggtgatgccaatcgctcgtactctgatgatgatgatgat
gaaggatcttcctctaatggaagtgaacagcacaaaaactcgctcacgttctccgatccc
aagctgtcgtctctcactcctaatgggcatctggatctggcgccgctggcggaggagaag
accaggactgacttctccgaggaaaaccaccggagcagaaccatctgcctgggcaggaga
tcctcgtctctgcgccacagccgcagttcccattaccaccactgggggcgtcctccccct
cagccgtcctggagccggcggtgtagctggaacagcgtgggtcgctccgcccgtggcctg
agggccggaggggtcatcggggggagcttacgggtccgcagcgttcactcgaaccccgcc
gaacacgagtctctcctgccccacccgccattcctgtcgcgccgacaccgccgcgctcta
tcactcgagctgcctgagctcctgcagtgccccccgctggtccggaagaagagcgtgtct
gccgaacaccaggactgcaatgggaagggcccgggccctcaggggacgctgctgggagag
gtttatccacagctcaacgcacgcaaagacaagcacgacctggaggaagacacagaatat
agcctctgcttccgtatccagaagatgatggaggtctatcgtccggactggtgtgagaag
agagaggattggtccatttacttattctcccctcagaacaagtttcgtctgctgtgtcag
acgatcatcgctcataagctctttgactatgtggttctggctttcatcttcctcagctgc
atcacagtggctctggagagacccagaatccatcagggcagtctggagcgagtcttcctc
accatctccaactacgttttcactgccatctttgtggccgagatgaccgtcaaggctctg
atgtcactgtttgtgttggcgtctaaagatggttgggtaaatatcatgtaccacgggctg
gacgctgtcgggattgaccagcagcccgtcatcaataacaacccctggatgctgctgtac
ttcatctccttcctgctgatcgtcagtttcttcgtcttgaacatgtttgttggtgtggtg
gtggagaacttccacaagtgccggcagcatcaggaggtggaggaggcgcggcggagggag
gagaagcggctgaagcgcatggagaagaggaggcgcaaggcccagcggctgccgtattac
tcctcgtacggtcgcgttcggcggatgattcactcgttctgcaccagtcattatctggac
ctcttcatcaccctcatcatctgcatcaatgtggtcaccatgagcctggagcactacaac
caaccacagtcgttggagacggcgctgaaatactgcaactacttcttcagctccacgttt
gtggtggagaccatgctgaagctcgtcgcgttcggcttcagacgcttcttgaaagacaga
tggaatcagctggatctggccatcgtgctgctgtctgtgatgggaatcactctggaggag
attgaaataagcgcttcgctcccgatcaatcccaccatcatccgcatcatgagggtcctg
cgcatcgcccgcgttctgaagttgttgaagatggccacaggaatgagagcgctgctcgat
accgtggtgcaggcgttaccacaggtggggaatctgggtttgctctttgttctgctgttc
ttcatctatgctgcgctcggtgtcgagttgtttggagaactggtgtgtaatgttgaatac
ccgtgtgaaggcatgagtcgtcacgccacgtttgaaaacttcggcatggcgttcctcact
ctcttccaggtgtctacaggagataactggaacggcatcatgaaggacacgctgcgcgag
tgtccgccgggcgacagctactcgtgtaactccagcctgcagatcatctcgcccatgtac
ttcgtcagcttcgttctgacggctcagttcgtcctgattaacgtggtggtggccgtgctg
atgaagcacctggacgactccaataaagaggcgcaagaggacgcggagatggacgcggag
atcgagatggagctggcgcagggtggcctgtgctgtctggggcatccggagcgctcgacc
ggggccgatgcgggcgagaggccatcgattcacaccaacactaacaccagccagagcgga
ttcacacagaaccagaggagactctactcatcggcacaggagaaccagtggctggagagc
gtctctctgctgatgaaggactcgctggatggagaaatgcagatgattgataatctatca
ggatcggtgttccaccattactgctctccagcaatcagacgagtcggcaggagccaatca
ggagagatccggctggctgaggtcgagcaaacgtctctgatgtcggagcagctgtcagat
aaatcctcctcaccggcgctacctgatgacatcagcctggacgagcacagcgaccgtaag
gagcacggcagcgctgacctgagcacaggcgagctcgtgtgcagaagcgttcttcctcag
agcgaggcatgcagcccagggcgagacagacgggaagagcggcgtgagatggggcaccgc
ggagatggctgtggaggagacggccagatgtcttcacctctctttcatctcccggctgag
ttcttccaccccaccaccgctgcggttccccagggcagcccagccatcggagcggcccag
ccgggctccaga
DBGET
integrated database retrieval system
