Sinocyclocheilus anshuiensis: 107668247
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Entry
107668247 CDS
T04917
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04140
Autophagy - animal
sanh04148
Efferocytosis
sanh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107668247
04148 Efferocytosis
107668247
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107668247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sanh04131
]
107668247
Membrane trafficking [BR:
sanh04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107668247
Hops complex
107668247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
Lact-deh-memb
zf-RING_16
zf_RING_Vps8
zf-C3HC4_2
DUF2229
zf-ANAPC11
zf-RING_11
zf-rbx1
DUF5600
DUF1664
zf-RING_5
zf-C3H2C3
KNOX2
DUF4446
zf-RING_UBOX
TPR_GEMI5
DUF2175
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
107668247
NCBI-ProteinID:
XP_016315545
UniProt:
A0A671PNY7
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MASILDQYEDSQNIRQHSRVSAANIGITHSGFVNVRLEEEKPIFNKQRIDFSPPEKINHF
SVCNNQLCMSLGKDTLLRIDLGKPDQPNQIELGRKDDSKVHKLFLDPTGSHLVISLTANE
CVYLNRNIQKVRSLSRWRGHLIESIGWNKLIGSETNTGPILVGTSQGIIFEAEISASEGS
LFNTNPDQYFKEVHSLEEDGKPAPVCCLEVERGLESKYFIVVTTRKRLFQFVGKLAEGSE
QQGFSSIFAQNQDLLPSFQEFPVNMGYSEITFYTSKLRSSPKTFAWMMGNGVLYGQLDYV
RPDSLLSDVQVWEYTSDIDLNCVKPISIVLTQFHFLLLLPDRVKGICTLNGQVVHEDVFP
EKFGTLKKMIKDPITGLVWIYTEKAVFRYHIQREARDVWQMYMNMNKFDLAKEYCKDRPE
CLDTVLAKEAEHCFQNKRYLESAKCYAVTQNYFEEIALRFIEAKQEEALKEFLIKKVTNL
KPTEKTQITLLVTWLTELYLNRLGQLETDDGKQHLFLETREEFRTFLKSPKHKECFYNNR
NTIYDLLASHGDVDNMVYFSVIMQDYERVISHYCQHDDYSAALDVLSKHCDDKLFYKFSP
VLMQHIPKKVVDAWIQMGNRLDPKNLIPALVNYSQMGSMQQINETIRYMEFCVYELDVKD
EAIHNYLLSLYAKHKPDSLLWYLEQAGTHVSDIHYDLKYALRLCAEHGYLQACVLVYKIM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMNCLSSC
NLLKIEDILPFFPDFVTIDHFKEAICNSLEEYNQHIEELKQEMEEATESAKRIREDIQEM
RNKYGVVQSQEKCATCDFPLLNRPFYLFLCGHMFHYDCLLQEVIPHLTSYKQNKLEELQK
KLPATTQTTKSRHRPREEDTVSLGKGQGSREQIKSEIDDIIACECVYCGELMIKSIDKPF
IDPQKFDQEMSSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcatctattctggatcaatatgaagattctcagaacatccgtcaacacagccgtgtg
tcagcggccaacatcgggattactcattcagggtttgtgaatgttaggttggaggaagag
aaacctattttcaacaagcagcgcatcgatttctcacctcccgaaaaaatcaaccatttc
tcagtgtgcaacaaccagttatgcatgagtctggggaaagacaccctgctgagaattgat
cttggaaaacctgatcagccaaatcagattgaactgggaagaaaggatgatagcaaagtg
cacaaacttttcctagatcctacagggtcacatttggtcatcagcctcaccgcaaacgaa
tgtgtatacctaaaccgaaacattcaaaaggtccgaagtttgtcacgatggagaggtcac
ctgattgaaagcataggatggaacaaattaatcggctctgagaccaacactgggccgatt
ctggtcggcaccagccagggaatcatctttgaagcggagatctctgcctcagagggctct
ctgttcaacactaacccagaccagtacttcaaagaggttcattccctggaggaggatggt
aagccagctccggtttgttgcctcgaggtggaacgtggtttggaatccaagtacttcatt
gttgtgaccacacggaaacgccttttccagttcgtaggaaagctggcagagggatccgag
cagcaggggttcagctccatctttgcccagaaccaggatctcctacccagcttccaggag
tttccagtcaatatgggctacagtgagattacgttctacacgtcaaagctgcgcagctcc
ccgaagacctttgcatggatgatgggaaatggggttttgtatggacagctagactatgtg
cggcccgactctctactcagtgatgttcaagtgtgggaatacacatcagacattgattta
aactgcgtcaagcccatctctatagtactcacacagtttcacttcctgctcctgctccca
gatcgcgtcaagggtatctgcactctgaatgggcaggtagtgcacgaagatgtgtttcca
gaaaagttcggcactctaaaaaagatgatcaaagaccccatcactgggctcgtgtggatc
tacaccgagaaagctgtgtttcgctaccacatccagagggaggcgcgggacgtttggcag
atgtacatgaacatgaataagtttgacctggccaaagagtactgcaaagaccgacctgaa
tgcctagatacggtgcttgccaaagaggcggagcactgcttccagaacaagcgctacctg
gagagcgccaaatgctacgctgtcactcagaattactttgaggagattgcgctgaggttc
atcgaggccaagcaggaggaggccttgaaagagtttctgattaagaaggtgaccaacctc
aagcccaccgagaagactcagatcaccctgctggtcacctggctgacagaactctatctg
aatcggcttggtcaactggagaccgatgacggcaaacaacacctctttctggagacccgc
gaagagttccgcacctttcttaaaagccccaaacataaagagtgcttctacaacaatcgc
aacaccatctacgacctgctcgctagtcacggcgacgtggacaacatggtgtatttctcg
gtcatcatgcaagattatgaacgcgttatatctcattactgccagcacgatgactacagt
gcagctttagatgttctctccaaacactgcgatgacaagctcttctacaagttctcccca
gttctcatgcagcacatccccaaaaaggtggtcgatgcatggattcagatgggaaatcgg
ttggatcccaagaatctgatcccagcgctggtgaactacagccagatgggcagcatgcag
cagataaatgagaccatccggtacatggagttctgtgtgtatgagctggatgtcaaagac
gaagccattcacaattacttactctcgctttatgccaaacacaagccggattctctgttg
tggtacctcgaacaagcgggaacgcacgtctccgacatccactatgacttgaaatatgcc
ttgcgcctttgtgccgaacatgggtacctgcaggcctgcgtcttggtttacaagattatg
gagctgtatgaggaagctgtggatctagctctacaggtggatgtagatttggccaagtct
tgcgccgaccttccagaggatgacgaggagttgaggaagaagctgtggctgaagattgct
cgtcatgtggttcaggaggagaaagatgtcaagaaggccatgaactgtctgtccagttgc
aaccttcttaagattgaggacatcttgcctttctttccagattttgttacgatagaccac
ttcaaggaggcaatttgcaactccctggaagagtacaaccaacacattgaggagctgaaa
caagaaatggaggaggccacagaaagtgccaaacgcatccgtgaagacatccaggagatg
aggaacaagtacggggtggtgcagtctcaggaaaaatgtgccacctgtgatttccccttg
ctcaaccgacctttctatctcttcctttgtgggcacatgttccattatgattgcctctta
caggaagtcatccctcacctcacttcctataagcagaataaattggaggagctacagaag
aagctgccagcgaccacacagaccaccaaatccaggcacaggcccagagaggaggatacg
gtcagcttaggcaagggtcaaggaagcagagagcagatcaagtctgaaattgatgacatc
atagcgtgtgagtgtgtctactgtggtgagctgatgatcaaatccattgacaagcctttc
atagatccacagaagtttgatcaagagatgtccagctggctctga
DBGET
integrated database retrieval system
