Sinocyclocheilus anshuiensis: 107668801
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Entry
107668801 CDS
T04917
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04137
Mitophagy - animal
sanh04140
Autophagy - animal
sanh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107668801
04137 Mitophagy - animal
107668801
04148 Efferocytosis
107668801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sanh03000
]
107668801
Transcription factors [BR:
sanh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107668801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
PAS_2
DUF6313
Motif
Other DBs
NCBI-GeneID:
107668801
NCBI-ProteinID:
XP_016316278
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MDSVAPGEKRVSSERRKEKSRDAARCRRGKESEVLHELARELPLPHSVTSNLDKASVMRL
ALSYLRLRKLLNTDVLNVESELDSQWNSSYLKALDGFLMVLSADGDIVYLSENVSKCLGL
PQIDLTGHSVFEFTHPCDHEELREMLAHRTGLSKKTKEQHTNRRFLLRMKCTLTSRGRTV
NVKSASWKVLRCSGHIHTTDGIKKGVCEEKNVCSTYLVLTCESIPHPANIEAPLDSRTFL
SRHTLDMRFTYCDERITELLGFEPVDLLQHSVYEYYHALDSDHMAKTHHNLFVKGQVCTG
QYRLLAKAGGFAWAETQATVIYNSKNSQPQCVVCVNYILSGIEQPKQILSLQQTNSTKIK
QEQEEHHEESLGTEVTMAELKEEAKAKNEKREELHDSLEGEPEALTVADPVLTLDITSTE
SALSVLTEIPLYNDVMLPSSSVLLPLSPLSPPCSSLNDDDASTAHLQPDDFQFPQSSPPD
SSRSQVDLPVDSELSDQLKTGHVERLFSMDIESKTPFNTQGVGLDLEMLAPYIPMDDDFQ
LRTVSLAESMCSSPGSVLELTPSSSTQTAPALPAAPLDLVSLDTRTTKQDNSREIIQGSD
ISSKCQTNPKLLKRKRETIPLSEAIRLGSVLQVLTDFPEKKVRKSEASSSEGIRHATILL
LPSDVASRLLSRSSEGGAVMMPLPQLTRYDCEVNVPVTGRQHLLQGEELLCALDLVI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggattcagtcgcacctggggaaaaaagagtgagttcagagcgaaggaaggagaaatcc
agagatgcggcacgttgtcggagaggaaaagagtcagaggtgcttcatgaactggccaga
gaactgcccctcccccacagtgtcacctctaacctggataaagcatcagtcatgagactc
gcactcagttacctgcgcctgcgtaaactactgaacacagatgtattgaatgtggagtct
gaattagattctcagtggaacagttcatatctgaaagctctggacgggtttctcatggtt
ctttctgctgatggcgacattgtctacctgtcagagaatgtcagcaagtgtctgggcctt
cctcagatcgaccttactggacacagtgtgtttgagtttactcatccatgtgaccatgag
gagctcagagaaatgctggcacacaggactggtctgtctaagaaaacgaaggagcagcac
acaaacagacgttttctattgaggatgaaatgtacactgaccagtagagggcgcactgtc
aatgtcaaatctgcctcctggaaggtgctgcgctgttcgggccatatccacacaacagat
ggcatcaagaagggtgtgtgtgaggaaaaaaatgtgtgttcaacatacctggtgctcacc
tgtgagtctattccccacccggcgaacatagaggctcctctggattctagaacatttctc
agccgccacactttagatatgcgcttcacctactgcgatgagaggatcacagagctgttg
ggttttgagccagtggatctgttgcagcattctgtgtatgaatactatcacgcgctggat
tctgaccacatggccaaaacacaccacaacctgtttgtgaagggacaagtgtgtactgga
cagtaccggctcctggctaaagcaggagggtttgcttgggcagagactcaagccactgtg
atctataacagtaaaaactcccagccacagtgtgtggtctgcgttaactacatcctcagt
ggcattgaacagccaaaacaaatcctgtcccttcagcaaaccaacagcacaaaaataaaa
caggaacaggaagaacaccatgaggagtcactcggaactgaagtgactatggcagagttg
aaagaggaggcaaaggcaaagaatgagaagagagaggagctacatgacagcctggagggg
gagccagaggcactgactgtagcagaccctgtcctcactctggatatcaccagcacagag
tctgcactctctgtgttgacagaaattcctctctacaatgatgttatgttgccctcttca
agtgtcctgctacctctctcacccctctctcctccctgctcctccctaaatgatgatgat
gcctccacagcccatctacaacctgacgacttccaattcccacaatcttcgcctcctgat
tcttccagatcccaggtcgatctccctgtggattcagaattaagtgaccagctaaaaacg
ggtcacgtggagagactattttccatggatatagagtctaagacaccctttaatacacag
ggagtgggtttggatctagagatgttagctccatacattcccatggatgatgatttccag
ctgcggactgtttctctagccgagtcgatgtgttccagcccgggttcagtgcttgaactg
accccctccagcagcacacaaactgcccctgctctcccagcagcccctctagacttagtg
tcactagacactagaaccacaaagcaggacaacagcagagaaattattcaaggcagtgat
atttcttctaaatgtcagaccaacccaaagctactcaaaagaaaacgagagaccatacct
ctgtctgaagcaataaggctgggttctgtgctgcaggtgttgactgattttccagagaaa
aaggtcagaaaatcagaagcttcatcatcagaagggattcgtcatgccacgatactgttg
ctgccatctgatgttgcgagtaggttattgagcagatcgtcagagggtggagccgtaatg
atgcccctcccccagcttacccgttacgactgtgaggtaaatgtgcctgtgactgggcgg
cagcacctgctacagggggaggagctactgtgtgccttggacctagttatttaa
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