Sinocyclocheilus anshuiensis: 107668875
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Entry
107668875 CDS
T04917
Name
(RefSeq) LIM domain only protein 7-like isoform X1
KO
K06084
F-box protein 20
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107668875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sanh04121
]
107668875
Ubiquitin system [BR:
sanh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107668875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
107668875
NCBI-ProteinID:
XP_016316386
LinkDB
All DBs
Position
Unknown
AA seq
1894 aa
AA seq
DB search
MEWRPQSSVCCEAAYSEAQRWIEAVTKKKFVSSNFRSSLENGLLLCDLINKIRPGVVKKL
NRLSTPIAGLDNISLFLKACAKLGLKEAQLFHPGDLQDLSTRVTVKHQESSRRLKNVLIT
IYWLGRKAHADHFYNGPYLKLKAFEGLLGKALYKTLEDCTSLQGSVRNSSCRDSWYSEKE
ELFPLRAGHRREDSLDSLDSLGSRTYSTSSDATLKGSSEGCGSDPEADLSFMMSENKEYR
RSLVVAPKTTTQYNQFLPSKDKQSGYVPAPLRKKRAERNDDNRRSWASPMYTEDDGTFTS
HERAGSDPSSITGLKSQTAVRPSLAYQYESSDSDADRPDPDVVLDDLASRRFHSPSPVAL
TNFALPMSHLETTAVPCTTRSQVAVSNVSRQTLTHLSSQSQPLQRTYRRPVSAGVCVYDD
SEEEDDEFGYADPVQDDIYARKVGLMPQPSVTVPFDKFLPKFWTPEEDAHVKKIKLGSQR
RPWYRKMQGFSHKKSGSSSEESDGDVNPWLSVPTFSRTQSEPPPSHSHAPEGLAQSSLTS
PLSCQIQPLTVAQQTAGLHNLKPPDFWPRPDPASGPRLIKCEKRPLLGREHPNDPYNVSA
DILPDLENDDMFTRRTKTFHSSNDLAKLKYGNFLLSRRRSKADVMVVIQPRHESEPIYPD
IEKDDVVFRRAQQQISHRPLSGAADNYHPVPIPEAWALPPKQQAKLMCDPVEPRQHQPKP
EIKHGAEQHLKADDMLLRKLRALNTQGKMEREAPGVSLSCSEEDMQKWQAIREASRVRYR
KRLMVERLLQKSSGSEGSKSVSDITDSEMNLSNLSMELRVEEMQKMRARLKDNEDKWQDD
LTRWKNKRRSVNSDIVKKKEEREQTDQISSGGIRKSKTFKEMQDERESRQQSNYRDSFNS
ISDDVFEGPVPRNRTLPARSYTIDTPYTPKDKPSVPSIPYLREKEPVAGTLASDQTDFHT
RRNRFSPDIPLKINNNIEESHTTTRSLLDDPVPALSSSNSSLIKHTSVSKTSSVLNSSEL
ISNTKPVKNSSGPISSLYKPNSMDTKQSGLDQVSASLPRSYQRSDSARLTSVVTPRPFGT
QSNRIASLPRVFTVDNSLKRTNGETDSLKKSTISNRYAQYVKEDEDISQESPVQSSDEEE
EEEKTPSPVPPVNRLSPLPKSPSPLIPSNEVDYSEMRISLNQKPNSSQDFGFQSNWDSTG
VRVKSVVPGSPAGLGQVKVGDEILTVNGHMVADLSYTEWKNSMEEALQQGSLFMDIRRHG
KNNWGRDLPSLPFKSHKTINLTSLDPLGPSEPYLSTNLDFTSQQTKDMVVKTVNVSSQSG
NNYGTNGINGGFREDSKTSNNKESITLKNLKRRSEFFEQGGSDTAISNLTVPSITTSTTR
SWDPEEERKRQEKWQKEQERLLQEKYKKDQEKLEDEWRKAQHELEKENFKKHEEEMQRLE
EERRKREEQEHLEEEKKKREEEQRKRREEEWLRLEEERRKQEEQERLEEEKKKREEEQRK
RREEEWLRLEEERRKQEEQERLEEEKKKREEEQRKRREEEWLRLEEERRKREEQERLEEE
KKKKREEEERKKREQDRLRLEEERRKREEQEYLEELRRNREEEERLLQEKERNRREEERR
RLEEQKRYQEQDKVDSFGYTNVYPQLSYSHRSISKSTPELDEVAKPDIKASGGLGEFSRD
YKKEPQSQAEVERQQILHEMRKKTSLNTDNSWIRQQSAANVTAKEPIDLPVRRGESLDNL
DMPRSSWRSSWSTSNSTSSIPDYSRPHSSLSGSSSYQSGRPESANLQSSQSMSSLRQSWS
PSAATPEPEPRAPPRNRSVSGRKICSFCNTPLGKGAAMIIESQGLCYHLSCFKCFKCRSD
LGGSEAGAEVRIRNQQLYCNSCYMRLKTGQPTAM
NT seq
5685 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgaccgcagtcttcagtgtgttgtgaggctgcttactcagaagcacagaga
tggattgaggcagtcactaagaagaagtttgtgagcagtaatttccggagttctctggag
aatggacttctgttgtgtgatctgatcaacaagatcagacctggcgtcgtcaagaagcta
aacagattatccacacctattgctggcctggacaacatcagcctcttcttaaaagcctgt
gcaaagcttggactaaaagaggcccagcttttccaccctggagaccttcaagacttatcc
acacgtgtgactgtcaagcaccaggagagcagcaggaggctcaaaaatgttctgatcacc
atatactggttgggcagaaaggcacatgctgatcatttttataatggaccttacctaaaa
ctaaaggctttcgagggattacttggcaaagcactatataagacactagaggattgcaca
tcactgcagggcagtgtgcgaaacagctcttgtagagacagctggtactcagagaaagaa
gagctcttcccactacgagccggacacaggagagaagactctctagacagcctcgactca
ctgggctccagaacttacagcacatcctcagacgctacactcaaaggaagcagcgagggt
tgtggcagtgaccctgaagcagatctgagcttcatgatgtcagaaaataaagaataccgc
cgttcactggtcgttgcacctaagaccaccactcagtacaatcagttcctgccatcaaag
gacaagcagtcaggctacgttccagcaccattacgcaagaaacgtgccgagcgaaatgac
gacaacagaagaagctgggctagccctatgtacacagaagatgatggcacttttacaagt
catgagagggcaggttcagacccttcatctatcaccgggttgaaatcccagacagccgtt
cgcccgtctttggcctatcagtatgagagcagtgattcggatgcagaccgaccggatccc
gacgtggttctagatgacctcgctagccgtagatttcacagcccctcccctgtcgctctg
accaactttgccttacccatgagccacctggagacaactgctgtcccgtgtactaccagg
tcacaggtggctgtcagtaatgtgtcccggcagacactgacccatctcagcagtcagtca
cagcctcttcagaggacttacaggagacctgtatcggctggtgtctgcgtttatgatgac
tctgaggaagaggatgacgagtttggctatgccgatcctgttcaagatgatatttatgcc
cgtaaagtaggcctgatgcctcaaccgtctgtaacagtgccttttgataaatttctgccc
aagttctggacacctgaggaggatgcacacgtgaagaagatcaaactgggctcccagcgc
cggccttggtacaggaagatgcaaggattcagccacaagaagtcaggttcatcctctgaa
gaatcagacggtgacgtcaacccctggctctctgtacctactttctcccgcactcaatct
gaaccccctccctctcactcccatgcacctgaaggcctcgctcagtccagcctcacttcc
ccactcagttgtcaaatacaacctctcacagttgctcagcagactgctgggctgcataat
ttaaagccccctgatttttggcccagaccggatcccgcctctggccccagactcataaaa
tgtgaaaagcgtcccctccttgggcgtgaacaccctaacgacccatacaacgtttctgcc
gacatcctgcctgatttggaaaatgacgatatgttcacacgtcgtacaaaaaccttccac
tcaagcaatgacctggccaaattgaagtatggtaacttcctgttgtctcgccgcagatcg
aaggccgacgtcatggtggtaattcagccccgccacgaaagtgaacccatttatcctgac
attgaaaaagacgatgtggtttttcgaagggctcaacagcaaatcagtcatcgccctctg
tctggggccgctgataactaccaccctgttcctattccagaggcatgggctttgccacca
aaacagcaggccaagctgatgtgtgacccagttgaacccagacagcaccaacccaaacca
gagattaaacacggagcagaacagcacctgaaggcagatgatatgctacttaggaagcta
agagctttaaatacccaaggaaagatggaaagggaagctcctggtgtttctttatcttgc
agtgaggaagatatgcagaaatggcaagccatcagagaggccagccgtgtgcgataccgg
aagaggctgatggtggagagactgctccagaaaagctctggtagtgaagggagcaaatca
gtgagtgacatcaccgacagtgagatgaacctcagcaacttgtcaatggagttgcgagtt
gaagagatgcagaagatgcgtgctcggttgaaggataatgaggataagtggcaagatgat
cttacaaggtggaagaataagcgcaggagtgtgaattctgacattgtgaagaagaaagag
gagagagagcagactgatcagatctcttcaggcggcatcaggaaatcaaagaccttcaag
gaaatgcaggatgagagagagagccgacagcaaagcaactacagggacagctttaactca
atctctgatgatgtcttcgaaggacctgtaccccgaaacagaactctgccagcacgtagc
tacaccattgatactccttacacccccaaggacaaaccttcagtaccctccataccatat
ctgagagaaaaggaacctgtcgctggcactctggcatcagatcagacagattttcatacc
agacgtaatcgcttcagcccagatatcccactgaaaattaataacaacattgaggagagc
catacaacgacccgaagccttctggatgatccagttcctgcgttgtccagcagcaactcc
agcctgatcaagcacaccagcgtcagtaaaaccagcagcgttctcaacagctcggagttg
attagcaacactaagccagtcaagaactccagcggccccattagctctttgtataaaccc
aattcaatggatacaaagcagtctgggctggatcaagtttctgcctccctccccaggagc
taccagagatcggatagcgcaagactcacctctgtagtcacgcccaggccattcggcaca
cagtccaaccgaatagcctcccttcccagagtgttcacggtggacaactctcttaagcgc
acaaatggagagacagacagcctcaagaaatctacaatttccaaccgatatgctcagtat
gtgaaagaggatgaagatatttcccaggaaagtcctgtacaaagcagtgacgaagaggag
gaagaggagaaaaccccatctcctgtccctccggtcaacagactgtcccccctgcccaaa
tctccatccccgctcatcccttctaatgaggtggactacagtgagatgaggatcagcctg
aaccagaaacccaacagcagccaggactttggctttcagagcaactgggactccacgggg
gtccgtgtcaaatctgtagttccaggcagcccagcggggctcggtcaagtgaaggttgga
gatgagatccttacagtgaacggccacatggtggcagacctgagctatactgagtggaag
aacagtatggaggaggccttgcagcagggtagtctgtttatggacatccgcagacatggc
aagaataactggggcagagacctaccttcccttccatttaaaagccataagaccatcaat
ctgaccagtctggatcctctaggtccctctgagccatacctcagcaccaacctggatttc
acatcccaacaaaccaaggatatggtcgtgaaaactgtgaatgtcagctcacagtctggc
aataattatggtacgaatgggataaatggtggtttccgtgaggattcaaagacttcgaat
aataaagaatccattactttgaaaaacttaaaaaggagatcagagttttttgaacaaggt
ggatcggacacagcaatatcaaatctgaccgttccctctatcactacatccactacccgg
tcctgggaccctgaagaagagcgcaaacgacaggagaaatggcagaaagagcaggagcgt
ttgctgcaggagaagtacaaaaaggaccaagaaaaactcgaagatgagtggagaaaggca
cagcatgagcttgagaaggagaacttcaaaaaacatgaggaggagatgcagcgtttagag
gaagagaggagaaaaagggaggaacaagagcaccttgaggaagagaagaagaagagagaa
gaagaacagaggaaaagaagagaagaggagtggctgcgtttagaggaagagaggagaaaa
caagaagaacaagagcgccttgaggaagagaagaagaagagagaagaagaacagaggaag
agaagagaagaggagtggctgcgtttagaggaagagaggagaaaacaagaagaacaagag
cgccttgaggaagagaagaagaagagagaagaagaacagaggaagagaagagaagaggag
tggctgcgtttagaggaagagaggagaaaacgagaagaacaagagcgccttgaggaagag
aagaagaagaagagagaagaagaggagaggaaaaaaagagaacaggataggctgcgttta
gaggaagagaggaggaagagggaggagcaagagtaccttgaagaactgaggaggaataga
gaagaggaagagcgcctccttcaggaaaaagagaggaatcgaagagaggaggagaggagg
cgactggaagagcagaagagatatcaggagcaagataaggtggactcctttggctatacc
aatgtttaccctcaattatcctactcacacagatctatttccaaatcaactccagaactt
gatgaggttgcaaaaccagatattaaagcgagcggtggtctgggtgagttcagtagagac
tataagaaagagccccagtctcaggctgaggtggagaggcagcagatccttcatgaaatg
agaaagaagacttccttgaacacagacaacagctggattcgccagcagagcgctgccaat
gttaccgccaaagaaccgattgatctgcccgtcaggagaggcgagtctcttgacaatctc
gatatgcctcgttcctcttggagatcatcatggagcacatctaacagcacctcgtccata
ccagactacagccggcctcattcgtccctctctggctcctcgtcgtaccagagtggacgt
ccagagtctgcaaatctgcagtcatctcagtccatgagctccctcaggcagtcctggtcc
ccatccgcagctacaccagagccagagcctcgagctccaccacggaataggtcagtgagt
ggcaggaaaatatgttcgttctgtaatacaccactgggcaaaggagcagccatgatcatc
gagtcccaggggctctgttatcatttgagttgtttcaagtgctttaaatgcaggtctgat
ttgggaggctcagaagccggagcagaagtcagaatacgaaaccaacagctctattgtaac
tcctgctatatgcgactcaaaactgggcagcccacagccatgtga
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integrated database retrieval system
