Sinocyclocheilus anshuiensis: 107669458
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Entry
107669458 CDS
T04917
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2-like
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107669458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107669458
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107669458
U7-dependent histone pre-mRNA processing factors
107669458
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
107669458
NCBI-ProteinID:
XP_016317181
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MTSIIKLTALSGVQEESALCYLLQVDEFRFLLDCGWDESFSMDIIDSLKRYVHQVDAVLL
SHPDHLHLGALPYAVGKLGLNCTIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
SAFDKIQQLKYSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIIYGVDFNHKR
EIHLNGCSLETISRPSLLITDSFNASYVQPRRKQRDEQLLTNVMETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLADLARVPSPKVVLCSQPDLESGFSRELFIQWCQDAKNSVILTYRTT
PGTLARYLIDTPGEKRIELEIRKRCRLEGRELEEYVEKEKMKKEAAKKQEQAKEVDMDSS
DESDMEDDLEQPAVVKTKHHDLMMLKWDEYGEIIRPEEFLVPELQATEEEKSKLESGLTN
GEEPMEQDLSDVPTKCTSITQTLEIRARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHG
PPEASQDLAESCKAFSGKDIKVYTPKLQETVDATSETHIYQVRLKDSLVSSLQFCKAKDT
ELAWIDGVLDMRVEKVDTGVVPEMGDAKEETEDGEPAVDVMPDLTTEPSATANQQAMKTL
FGEDDREISEESDVIPTLEPLPAHEVPGHQSVFINEPRLSDFKQVLLREGIQAEFVGGVL
VCNNLVAVRRTEAGRICLEGCHCDDYYRIRELLYQQYAVV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccatcatcaagctgacggctctttccggagtccaggaggaatcggctctgtgt
tacctgttacaggtggacgagttccgcttcctgctggattgtggctgggatgaaagtttc
tccatggacatcatagattccctgaagcggtatgtgcatcaggtggacgcagtgctgctc
tctcaccccgatcatctgcatctgggcgctttaccgtacgctgtgggcaagctggggctc
aactgcaccatctacgccaccatccccgtctacaagatgggccagatgttcatgtacgat
ctctatcagtctcgacacaacactgaagatttcactctgttcacactggatgacgtcgat
tcagcctttgacaagatccagcagctgaaatactctcagatcgtcaacctgaaaggaaaa
ggtcacggtctgtccatcaccccacttcctgcgggtcacatgatcggtggcactatctgg
aaaatagtgaaggacggagaggaagagatcatctatggtgtggatttcaaccacaagaga
gagattcatctaaacggctgctccctggagaccatcagcagaccgtctctcctcatcaca
gactccttcaacgcctcgtatgttcagcctcgcaggaaacagcgtgacgagcaactactc
accaatgtcatggagaccctccgtggcgacgggaacgtgctgatcgcggtggatacggcg
gggcgagttctggaactggctcagctcctggatcagatctggaggaccaaagacgcagga
ctgggcgtttactcgctcgccctgctaaacaacgtcagctacaacgtggtggagttctca
aagtcccaggtcgagtggatgagcgataaactgatgcgatgcttcgaggacaagcgcaac
aaccctttccagttccgccacctctcgctctgtcacggcctggccgatctggcccgcgtg
cccagcccgaaggtggttctgtgcagccagcccgatctggagtctggcttctcaagggag
ctcttcatacagtggtgtcaggacgccaagaactcggtcatcctcacctacaggaccaca
ccgggaacgctggcccgctacctcatagacaccccgggggagaagaggatcgagctggag
ataagaaaacgttgtcgactggaaggacgagaactagaggaatacgtggagaaagagaaa
atgaagaaagaggctgccaaaaaacaggagcaggcgaaagaggtggacatggactcgagc
gatgagagcgatatggaggacgatctggagcagccggcggtggtgaagaccaaacatcac
gacctgatgatgctcaaatgggacgagtatggagaaatcatcaggcctgaggagtttctg
gttcctgagctccaggccacagaagaggagaagagcaagctggagtctggactgactaac
ggagaggagccgatggagcaggacctgtccgacgtccccaccaaatgcaccagtatcaca
caaactctagagatcagagctcgagtcacatacatcgattatgaaggccgttctgacggc
gactccattaagaagatcataaaccagatgaaacccagacagctaatcatcgttcacggg
ccgcctgaggccagtcaggacctggccgagtcctgcaaggccttcagcgggaaagacatc
aaagtttacacgccaaaactgcaggagacggtggacgccaccagcgagacccacatttac
caggtcagactgaaggactcgttggtcagttcgctgcagttctgtaaagccaaagacacg
gagctggcctggatcgatggcgttctggacatgcgggtggagaaagtggacacaggtgtc
gtcccagagatgggagacgccaaagaggagacggaggacggagagccagccgtggacgtc
atgccggacctcacgactgagcccagcgccacggctaaccagcaggccatgaagactctg
tttggagaagacgacagggagatttcagaggagagcgacgtcattcccacgctggagccg
ctgcctgctcatgaggtcccgggtcatcagtctgtgttcatcaacgagcctcgcctgtcg
gactttaagcaggttctgctgcgtgaagggatccaggccgagtttgtgggcggagttctg
gtgtgtaataatctggtggctgtcaggaggacggaagcgggccgcatctgtctggaaggc
tgccattgtgatgactactacaggattcgtgagctgttgtatcagcagtatgctgtagtt
taa
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