Sinocyclocheilus anshuiensis: 107669735
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Entry
107669735 CDS
T04917
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107669735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sanh03041
]
107669735
Spliceosome [BR:
sanh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107669735
Complex C
U5 SnRNP specific factors
107669735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
107669735
NCBI-ProteinID:
XP_016317595
LinkDB
All DBs
Position
Unknown
AA seq
2342 aa
AA seq
DB search
MAAAFPYRGVPVTMPPGVPPPPPAVAPVPDYMTEEKLQEKARKWQQLQAKRYSEKRKFGF
VDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQI
RDVPVLYHITGAISFVNEIPWVIEPVYISQWGTMWIMMRREKRDRRHFKRMRFPPFDDEE
PPLDYADNILDVEPLEAIQMELDPEEDSSVAEWLYEHQPLKDTTKYVNGTTYRRWQFTLP
MMSTLYRLANQLLTDLVDKNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDW
NEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFD
PLINPISHRHSVKSQEPLPDDDEEFELPEYVEPLLKETPLYTDNTANGIALLWAPRPFNL
RSGRTRRAIDVPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLF
RSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTK
ERKKSRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYR
YKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLG
NLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHL
SESWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCK
KNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYK
HDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKE
VGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVY
KWCQGINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKN
NVVINYKDMNHTNSYGIIRGLQFASFIVHYYGLVMDLLVLGLHRASEMAGPPQMPNDFLS
FQDMATESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKC
WPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTIQWENSFVSVYSKDNPNLLFNMCGFE
CRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGS
TTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP
VVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQ
PWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYD
KGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGT
YFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQV
QLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELDALEIETVQKET
IHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDS
HDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGGKPLIQQAMAKI
MKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKT
FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLP
VEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQ
MVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTD
EEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQT
KEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVS
SDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGT
HQTVHLPNQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTII
ITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMV
PGQVSWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDM
YA
NT seq
7029 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcattcccctacagaggtgtgcctgtaacaatgcctccaggtgttcctcca
cctcctcctgctgttgctccagtaccagattacatgactgaggagaaactgcaagagaaa
gctcggaaatggcagcagcttcaggccaaacgctactcggagaagaggaaatttggcttt
gtggatgctcagaaagaggacatgccacctgagcatgtgcgcaaaatcatcagggatcat
ggtgacatgacgaacagaaaatttcggcatgacaagagggtctaccttggagccttgaaa
tatatgccccatgcagtgctcaaactgctggagaatatgcccatgccctgggagcagatc
agagatgttcctgtgctctaccacattactggtgccatttcctttgtaaatgaaatccca
tgggtgattgagccggtgtacatttctcagtggggcacgatgtggatcatgatgcgtcgt
gagaagcgagacagacggcactttaagcgaatgcgtttccccccatttgatgatgaagag
cctccattggattatgcggacaacatcctggatgttgagcctctggaggctatccagatg
gagctggaccctgaggaggactcctctgtggcagaatggttatatgagcatcaacctctg
aaagataccacaaaatatgtgaacgggaccacatacagacgctggcaattcactttacca
atgatgtctactctgtatcgattggctaatcagttgcttacagacttggtggataaaaac
tacttctacttgttcgacttgaaggctttcttcacctctaaagcgttgaacatggccatt
ccagggggacccaaatttgagcctcttgtcagagacattaacctccaggatgaagactgg
aatgagttcaacgacatcaacaagatcatcatcagacagccaatcaggacagaatacaaa
attgcattcccttacctatacaacaacctgccacatcatgtgcatctcacctggtaccac
acaccaaacgtggtgttcatcaagactgaggatcctgatctgcccgccttctactttgac
cctctgatcaaccccatctctcataggcactccgtcaagagccaagagccactgccagat
gatgatgaggagtttgaactgcctgagtatgttgagccattactgaaggagacgcctctc
tatactgacaacacagccaatggaattgcgctgttgtgggcacctcgtccatttaatctt
cgctcaggaagaaccagacgagccattgatgtgcctctcatcaaaaactggtatcgtgag
cattgtcctgcgggccagcctgtgaaggtacgtgtgtcttaccagaagctcctgaagtac
tacgtgctgaatgctctaaaacacagaccacctaaagcacagaaaaagagatacctgttc
cgctctttcaaggccaccaaattcttccagtccacaaagctggattgggtagaagtcggt
ctacaggtgtgccggcagggctacaacatgctgaacctgctgattcacagaaagaacctc
aattacctgcacttggactacaacttcaacttgaagcctgtgaaaaccctcaccacaaag
gaacgtaagaagtccagattcgggaatgcgttccacttgtgccgtgaggttctgcgtttg
agcaagcttgtggtggacagccatgtgcagtacaggcttggaaatgttgacgctttccag
ctgtcagatggactgcagtacatcttcgcccatgtcggtcaattgactggcatgtaccgc
tacaagtacaagctcatgaggcagatcagaatgtgcaaagatctgaagcatctcatctac
taccgcttcaacacaggcccagtcggaaaaggtccaggctgtgggttctgggctccagga
tggagagtctggctgttcttcatgagaggaatcactcctcttctggagcggtggcttggc
aatcttctggccaggcagtttgagggtcgacactccaagggtgttgcaaagactgtgacc
aaacagcgtgtggaatctcactttgatctggagctgagagctgctgtgatgcatgacatc
ctggatatgatgcctgagggtatcaagcagaacaaggccagaaccatcttgcagcatctc
agcgagtcatggagatgctggaaggccaacatcccttggaaggttcctgggcttccaacc
cccattgagaacatgattctccgctacgtgaaggccaaagctgactggtggaccaacaca
gcccactacaaccgtgagagaatcagaagaggagccactgtggataagactgtgtgcaag
aagaacctgggacgtctcactcgactctatctaaaggcggagcaggagagacagcacaat
tacctgaaggatggaccttacatcacagctgaggaggccgtggccatctacaccaccaca
gtgcactggttggagagtcgtcgtttctctccgatccccttccctcctctgtcttacaaa
catgacactaagctgctcatcctggctttggagagactcaaggaggcttacagtgtgaag
tcgaggctgaaccagtcacagcgtgaggagttgggtctgattgagcaggcctatgacaac
cctcatgaggctctgtccagaatcaaacgtcacctcctcactcagagagcgttcaaagag
gtgggcatcgagttcatggacctttacagtcacttggtgccggtttatgatgttgagcct
ctggaaaagattaccgacgcatacctggatcagtacctctggtacgaagcagacaagcgc
agactttttccaccctggattaaaccagctgatacagagccgcctccactactggtgtac
aaatggtgccaaggaatcaacaacctgcaggatgtgtgggagacggcagaaggcgaatgc
aacgtcatgctggagtctcgctatgagaagatgtatgagaagattgacttgacactgctg
aacaggcttctacgtctcattgttgatcacaacattgccgattacatgacggccaaaaac
aacgttgtcattaactataaggacatgaaccacacaaactcgtatggtatcatccgcggc
ctgcagtttgcctctttcattgtgcactactatgggctggtgatggacctgctggtgctg
ggtctgcacagagccagtgagatggctggaccgcctcagatgcccaatgacttcctcagc
ttccaggacatggccactgagagtgcccatcctatacgtctatactgcagatacatagac
cgcattcacatctttttcaggttctctgctgatgaggcaagagatctgatccagaggtac
ttgacagagcacccagaccccaacaatgagaacattgttggctacaacaataagaaatgc
tggccccgagatgctaggatgagactgatgaaacatgatgtgaacttgggccgtgctgtg
ttttgggacatcaagaatcgcctgcctcgttctgtgaccacaattcagtgggagaacagc
tttgtgtctgtgtatagcaaggacaaccccaacctactcttcaacatgtgtggctttgag
tgtcgtatcctccccaagtgccgcactagttatgaggagtttacgcacaaagatggagtg
tggaatttgcagaatgaagtaacaaaggaaaggacagcacagtgtttcctgcgtgtagat
gatgagtccatgcagaggttccacaacagagtgcgacagattctgatggcttctgggtcc
accaccttcaccaagattgtgaacaagtggaacactgctctgattggtctgatgacatac
ttccgtgaagctgtggtcaacactcaagagcttttagacctgctggtgaagtgtgagaat
aagattcaaacccgtatcaagattggattgaactccaaaatgcctagtcgtttccctcct
gtggtgttttacactcctaaggagttgggaggactgggaatgctttccatgggacacgta
ctgattccacagtctgaccttaggtggtccaaacagactgatgtgggcatcactcatttc
cgctccggtatgagtcatgaggaggatcagttgattcctaatctgtaccgctacatccag
ccatgggagagcgagttcattgactcccagagagtttgggccgaatacgccctcaaacga
caagaagccattgctcagaacagacgtttgacactggaggatctggaggactcctgggac
agaggtattccacgtatcaacacactcttccagaaggacagacacactctggcttatgac
aagggctggagagtcagaacagacttcaagcagtaccaggtgttgaagcaaaatccattc
tggtggactcaccagagacatgatgggaaattgtggaatttaaacaactaccgtactgac
atgatccaggcacttggaggcgtggaaggcattcttgagcatacgcttttcaagggaacc
tacttccccacctgggagggtctcttttgggagaaggccagtggtttcgaagagtccatg
aaatggaagaaactcaccaatgctcagagatctggtctgaaccagattcctaatcgacga
ttcaccttgtggtggtctcctacaatcaacagagccaatgtatatgtgggtttccaagtg
cagttggacctcactggaatcttcatgcatggtaaaatcccaactctcaagatctctctg
atccagatcttcagagctcacttgtggcagaagattcatgagagcgttgtcatggatctc
tgtcaggtgtttgaccaagagctggatgctttggagatcgagactgtccagaaagagaca
atccatcccaggaagtcttacaaaatgaattcctcctgtgctgacattctgttgtttgcc
tcctacaagtggaacgtctctcgcccctcacttctagcagactccaaggatgttatggac
agcaccaccacacagaagtactggattgacattcagctcagatggggtgactacgactcc
catgacattgagcgatacgccagggccaagttcttggactacaccactgacaacatgagt
atttacccatcaccaactggagtactgattgccattgatctggcctacaaccttcacagt
gcttatggtaactggttccctgggggcaagcccctgatccaacaggccatggcgaagata
atgaaggccaacccagctctgtatgtgctgagagagcgaatccgcaagggtctgcaactc
tactcttcagagcccactgagccttacctgtcttcccagaactacggagaactcttctcc
aaccagatcatctggtttgtggatgacaccaatgtgtatagagtcaccatccacaagacc
tttgaaggtaacttgaccacaaaaccaatcaatggtgccattttcatcttcaaccccaga
actggacagcttttcctgaaaatcattcacacatctgtatgggcaggacaaaagcgtctt
ggacagctggctaagtggaaaactgctgaagaagtggctgccctgatccgatcgctgcct
gttgaagagcagcccaagcagattattgtgaccaggaagggcatgttggatcctcttgag
gtacacttgctggacttccccaacattgtaatcaagggctctgagctccagctgcccttc
caggcctgtctgaaagtggagaagtttggagacctcattctgaaggccacagagcctcag
atggtcctgttcaatctgtatgacgactggctgaagaccatctcctcttacactgcattc
tctcgtttgatcttaatcctgagagcacttcacgtcaacaatgatcgtgctaaagttatc
ctgaagcccgataaaaccacaatcactgagcctcaccacatctggcccacactgactgat
gaagagtggatcaaagtggaggtgcaactcaaagatctcatcctggctgactatggcaag
aagaacaatgtgaatgtggcatctttgacccagtctgaaatcagggacatcatcctgggt
atggagatctccgctccatcacagcagagacagcagatcgctgagatcgagaagcagacc
aaggagcagtctcagctaacagccacacaaactcgcactgtcaacaaacacggagatgag
attatcacctccaccacaagcaactacgagacgcagaccttctcttccaaaactgaatgg
agagttagggcgatctctgctgccaacttgcacttacgtactaaccacatctatgtgtca
tcggatgacattaaagaaactggctacacttacatcctgcccaagaacgttctgaaaaag
ttcatctgcatctcggatctgcgtgctcagattgcaggttatctgtatggaaccagccct
ccagataaccctcaggtaaaggaaatccgctgcatcgtgatggtgccacagtggggtacg
catcagaccgttcacctgcccaaccagctgccacaacacgagtacttgaaggaaatggag
cctcttggatggatccatacacagcccaatgaatcgccccagctctctcctcaggatgta
accacccatgcaaaggtcatggctgacaacccatcctgggatggcgagaagactatcatt
attacttgcagtttcacccctggttcctgcacgctgacggcctacaagctgactcccagt
ggatatgagtggggtcgacaaaacacagataagggaaataaccccaaaggttacttgccc
tctcactacgaaagagtccaaatgcttttgtctgaccgtttccttggcttcttcatggtg
cctggccaagtctcctggaactacaacttcatgggtgttcgccatgatcccaacatgaaa
tatgacctacagttggccaacccgaaagagttctaccatgaagttcacaggccatctcac
ttcctcaactttgcttctctgcaggagggtgaaatctacaatgctgatcgtgaagatatg
tatgcataa
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integrated database retrieval system
