KEGG   Sinocyclocheilus anshuiensis: 107669790
Entry
107669790         CDS       T04917                                 
Name
(RefSeq) roquin-1-like
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
sanh  Sinocyclocheilus anshuiensis
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sanh03000]
    107669790
   04121 Ubiquitin system [BR:sanh04121]
    107669790
Transcription factors [BR:sanh03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    107669790
Ubiquitin system [BR:sanh04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107669790
SSDB
Motif
Pfam: ROQ_II Roquin_1_2-like_ROQ zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-CCCH zf-C3HC4_3 Prok-RING_4 zf-C3HC4 zf-CCCH_4 zf_CCCH_4 zf-CCCH_UNK Baculo_IE-1 zf-C3HC4_2 Ribosomal_S4 FYVE zf-RING_4
Other DBs
NCBI-GeneID: 107669790
NCBI-ProteinID: XP_016317671
LinkDB
Position
Unknown
AA seq 840 aa
MPVQAPQWTEFLLCPICTQTFEESHRKPISLGCGHTVCKMCLNKLHRKACPFDQTTISTD
IEQLPVNTALLQLVSGQVPKAPPVTLLTAAEEVKHYEESRTCVEDLALYLKPLSNTRGAG
LNGAAQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPVRVTKRDEDSSLMQLKDEFRTYEALRREHDSQIVQIAMEGGLR
IAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNCLRPHL
ELLADIDPSPDAPAPTWEQLAKGLEAVRTVVHGLVDFIQNHSKKGGDQQQPPQHSKYKTY
MCRDMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLGMRRQLSQSLTQLNEMDFGAGLLP
DEGPPMEGIPRKHSSITNVILATGPDSTLAHLVSRGSDPSYDPTHKPGKMESGSLSAPGS
PPDSLESIPKPGMLINSHCRVAGEGAVGQKHMPAVPRVPHMYSPHQSERYYSDTRGPLPP
SAQYESSQYPAGNPYPHHHVHPRYARHPTPDPGMPPYPDSYSSSYTSERQCANPSSHYGY
PSHHDGRRHSAYAHPQTFPPREELVRRSPDVPPPLPPQNASYLPEPDNYNHSSHIRNYPR
NAYTRPQPSLDYLHRRRQEIMAQLEERKVASPSPFSSSHSYDPSYPQDMRGQSHNPSSVM
SQPSRVDWSSGNLSSEQLSLELHQVERDIVMRTQEMAMENHDGKYKRVSVENGQDEHTLQ
RDEHLLTLSEGSNGSIALVQDCGLVSSSLSSLTSKTSSLSLSSEQVASSPDLPKNGVVHS
NT seq 2523 nt   +upstreamnt  +downstreamnt
atgcccgtgcaagccccgcaatggactgagtttctgttgtgtcccatctgcacacaaacc
ttcgaggagagccaccgcaagcccatcagcctgggctgcggccacactgtgtgcaaaatg
tgcctgaacaaactgcaccgcaaggcctgcccgtttgaccagaccaccatcagcacggac
atcgagcagctgcccgtcaacacagcgctgttgcagctcgtcagcggacaggtacccaaa
gctccccccgtcaccttactgacagctgcagaggaagtcaagcactatgaggagtctcgc
acatgtgtggaggacctggccctctatctcaaacccctgagcaacaccagaggtgcaggg
ctgaatggcgccgctcagagcgttctcagcagacccatgcagaggaagctggtgactctg
gttcactgccagctggtggaggaggagggccgcatccgggccatgcgggcggcccgctct
ctgggtgaacgtactgtaactgagctcatcctccagcaccagaacccccagcagctctcc
tccaacctgtgggccgccgtcagagccagaggctgccagtttctcggccctgtaagagtg
accaaacgtgacgaagattcctccttgatgcagctgaaggatgagtttcgcacatacgag
gctcttcggagggaacacgactctcagatcgttcagatcgcgatggagggcggactgcgt
atcgcccctgaccagtggtcatctctactgtacggtgaccagtcgcacaaatcccacatg
cagtccatcatagacaagctgcagacaccagcatcctttgctcagagtgtgcaagaactc
accatcgcccttcagagaaccggagatccagccaatctcaactgcctcagaccccacctg
gagctcctggccgacatcgaccccagcccagatgcccctgcacccacatgggagcagcta
gccaaagggctggaagcggtgcggaccgtcgttcacggcctggtggatttcatccagaac
cacagcaaaaaaggaggggatcagcagcagccacctcagcacagcaaatacaagacctac
atgtgtcgggacatgaaacaaaaaggcggctgtcctcgcggagcaagttgcaccttcgct
cactctcaggaagagcttgaaaagtaccgtaagatgaataaacgtttgggaatgaggcga
cagctcagccagtccctgacccagctgaacgagatggacttcggcgccggtctgttgcct
gacgaggggcctccgatggagggaatcccacgcaaacactcctccatcactaacgtcatc
ctagcaacaggacctgattccaccttggcccacctggtttccagaggctcggacccgtca
tatgacccaacacacaaaccagggaagatggagtctgggagcctcagtgcacctggctca
cctccagactcattggaatccatcccaaaaccagggatgctcataaattcccactgcagg
gtagcgggcgaaggcgcagtcggacagaagcacatgcctgcggtgcctagagttcctcac
atgtactcaccacaccagtctgaacggtattactctgatacaagaggccctctgccaccc
tccgcccaatatgaatcctcccagtaccctgcaggtaatccttatcctcaccaccatgtg
cacccacgctacgcccgccacccgactccagatccaggcatgccaccatatccggactcc
tattccagctcctacacttcagagcgccagtgcgccaaccccagctctcattacggatac
ccttcacaccatgacggccgtcgccactcagcctacgcccatccccagacattcccccca
cgggaggaactggtgcgaaggagtccggatgttcccccgccgctaccaccccaaaacgct
tcgtacctgccagagccagacaactataaccactccagtcacatcaggaattacccgagg
aatgcctacacacgacctcagccctccctagactacttgcaccgccgaagacaggagatc
atggcccagctggaggagagaaaggtggcttccccgtcacccttcagctcctcacactca
tacgaccccagctaccctcaggacatgagggggcagagccataacccgagctcagtcatg
tcccagccgtctcgagtggactggtcgtctgggaatttgtccagtgaacagctgagtctc
gagctgcaccaggtggagagagatatcgtcatgaggacacaggagatggccatggagaac
cacgatggcaagtacaagcgggtctcagtggaaaatggacaagacgaacacactctgcaa
cgagatgaacatctactcactcttagtgagggctcaaacggctccatcgctttggtccag
gactgtggtctcgtcagcagcagcttgtcctcgttgaccagcaagacgtcatctctcagt
ttgtcctccgaacaggtggccagcagccctgatttgcccaagaacggagtcgtccactcc
tag

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