Sinocyclocheilus anshuiensis: 107670021
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Entry
107670021 CDS
T04917
Name
(RefSeq) exosome complex exonuclease RRP42-like
KO
K12589
exosome complex component RRP42
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107670021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107670021
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107670021
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
107670021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DDE_Tnp_4
Motif
Other DBs
NCBI-GeneID:
107670021
NCBI-ProteinID:
XP_016317971
UniProt:
A0A671Q1P2
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MAAVEVSEAEKVYIMHGVRDDLRLDGRECEDYRHMEIETDVVSNTAGSAKISLGHTDVLV
GVKAEIGKPKAMVPDEGYLEFFVDCSANATPEFEGRGGEELGVELSNTLCKVFNNRHSLD
LRSLCICPGENCWVLYVDVLLLQCDGNLFDAISIAIKAALFNTRIPKVHISEDEEGVKEI
ELSDDPYDCMRLNVKNVPCIVTLCKIGHRHVVDATLQEKACSVASLLISVTHRGTVTCVR
KMGGGSLDPESIFEMTEAGKRVGKALHVPLMELLQKEESLGKKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggttgaagtaagcgaagcggagaaggtttatattatgcatggagttcgagat
gacctgagattggacggacgagaatgtgaagactacagacacatggagatcgagacggac
gtggtgtcaaacactgctggttctgctaaaatcagtcttggtcacacagatgttcttgta
ggagttaaggcagagattggtaaacccaaagccatggtgccagatgaaggttatctggag
ttctttgtggactgctcagcaaacgccactccagagtttgaggggcgtggaggggaggag
ctgggggtggagcttagtaacacactctgtaaagtgttcaacaacagacacagcttggac
ctgcgttccctctgcatctgcccgggagagaactgctgggtgctgtatgtggacgtgttg
cttctgcagtgtgacggaaacctgtttgatgccatatccatcgcaataaaagctgctctg
tttaatacacgaatccccaaagtgcacatatctgaggatgaggagggtgtgaaggagatc
gagctgtcagacgacccttacgactgcatgcggctcaatgtgaaaaatgtcccgtgtatc
gtaaccctctgcaagattggtcacagacacgtggtggacgctacactacaggaaaaggcc
tgttctgtggccagtctcctgatttcagtcacacatagaggaacggtcacatgtgtcagg
aaaatgggaggaggaagtctagatccagagagtatctttgaaatgacagaggctggtaag
cgtgtgggaaaggctcttcatgtgcctctcatggagctgctgcagaaagaagaaagtctt
ggcaagaaacggcagaaagtgggattcctcggatag
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