Sinocyclocheilus anshuiensis: 107671118
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Entry
107671118 CDS
T04917
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
sanh
Sinocyclocheilus anshuiensis
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sanh03036
]
107671118
Chromosome and associated proteins [BR:
sanh03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107671118
microRNA pathway
RISC loading complex
107671118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Dicer_PBD
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
ResIII
DEAD
Helicase_C
Cas3-like_C_2
dsrm
DSRM_2
DUF87
Motif
Other DBs
NCBI-GeneID:
107671118
NCBI-ProteinID:
XP_016319449
LinkDB
All DBs
Position
Unknown
AA seq
1880 aa
AA seq
DB search
MAGLQLVTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGK
TFIAALLIKELSHQIRGEDGKRTVFLVNAASSVVQQASTVRTHSDLQVGDYMSEDMTSWP
EEMWNREMMENQVLVMTCRIFFHVLKNGVLPLSKINLLVFDECHLAITDHPYREIMKVCE
GCPGCPRILGLTASILNGKCDPCDLEEKIQNLEKILQSSAETATDLVVLDRYASQPREVV
LDCGLYQDQSGLSERLLNELDEALHFLNDCNLSAHREDRDPTFISKQVLNDCRAVLTVLG
PWCADKAAGIMVRELQKYIKHEQEELNRKFLLFTDTILRKIHALCEEHFSPASLDLKFVT
PKVIKLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEEEEAEAKEKPEANF
PSPFTNILCGIVFVERRYTAVVLNRLIKEGGKQDPELAYISSNFITGHSIGKNQPRNKQM
EVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR
APVSNYIMLADSERTNTFEEDLKTYKAIEKILRNKCSKSAECSDFELEPATDDDNVLPPY
VLRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTVELKTGGYQSTLFLPINSP
LRVPVTGPTMNCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEET
NVPGRPGSTKRRQCYPKAIPECLRGCYPVPEQPCYLYVIGMVLTTPLPDELNFRRRKLYP
PEDTTRCFGILTAKPIPRIPHFPVYTRSGEVTISIELQKSDFTLSAEQLELITRLHQYIF
SHILRLEKPALEFKPVEADSAYCILPLNIVEDSNTLDLDFKFMEDIEKSEARIGIPNTQY
TKKNPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKT
KYNLDLSNVNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV
PELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRSQTAIDAGVGAQTLPPDFRYPNL
DFGWKKSIDSKSFISCPSACMEDDDHCKHGTSSDSDHTAQEGCSTEASQPPEGALPCENC
NTPDEKLETHPVLPVTDLQTPNKDKSDCVCSRNLNGTRSDNDNLPHRRDICQCSQLGPLE
SDLSTQTTTSVPVRPSLAGEPQPQPSDECTPGRNSDLCDGHVKKPTSNCCPKPEMATSTT
APSEVSSEVSDVTSTLACTGPAWDSPKTLGPNPGLILQALTLSNASDGFNLERLEMLGDS
FLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWL
PPGYVVNQDKSSTDKWDSDENKDLANGKASDDEDDDDEAEDVEVEPSKEEVNVEDELEYY
YEHIRFIDNMLIGSGAFGKKISLQPAEPGYEWKAPKKAHNSHFSPDGGTDEFDYSSWDAM
CYLDPSKAGEEDDFVVGFWNPSEENCGTDIGKQSISYDLHTEQCIADKSIADCVEALMGC
YLTSCGERAAQLFLCSLGLKVLPAEKQSSGGSAKLQYGWLKIPPRCMFDHPDAERTLNHL
ISGFENFEKKIKYTFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYE
DPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEM
QGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLI
EKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFTGVGRSYRIAKS
AAARRALRSLKANQPQVQNN
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atggctggcctacagctggtgacccctgcctcctcacccatggggcccttcttcggtctc
ccgtggcaacaggaagctatccatgacaacatatacacaccaaggaaatatcaggttgaa
cttcttgaagcagctcttgaacacaatactattgtctgcttaaatactggctcagggaag
acctttatcgcagcactcctaatcaaagaactctcccaccaaatccgtggagaggatggg
aagagaacagttttcctggtgaatgcagcatcatctgtggttcagcaagcatctactgta
agaacccactctgatctccaggtgggcgactacatgtcagaggacatgacatcatggccc
gaggagatgtggaacagagagatgatggagaatcaggtgctggtcatgacgtgccgcatc
ttcttccacgtgttaaaaaatggagtcttgccactatcaaaaatcaacctgctggttttt
gacgaatgccaccttgcaatcacagaccatccttatcgggaaataatgaaggtttgtgag
ggttgcccaggctgtcctcgcattttgggtctgactgcttccattttaaatggcaaatgt
gacccttgtgatttggaggagaagattcagaacctggaaaagattctgcagagcagtgca
gaaactgccactgatcttgtggtgctggataggtatgcgtcccagcctcgtgaggtggtg
ctggattgtgggctgtaccaggatcagagtgggctctctgagaggcttttaaatgagctg
gatgaagcccttcattttcttaatgactgcaacttatctgctcatcgagaagatagagat
cccacattcatctccaaacaggtgctgaatgactgccgcgccgtgttgactgtgttgggc
ccttggtgcgccgataaagctgcaggaatcatggtccgggagctgcagaaatatatcaaa
catgaacaggaagagctgaaccgcaagttcctattgttcacagacaccattctgagaaaa
atccacgccttatgtgaggagcatttctccccagcttccctagacctgaagtttgtcact
cccaaggtcatcaaacttctggagattctccacgagtacaagcctttcgaacggcagcag
tttgagagtgtggagtggtacaataatcgcaatcaggacaattatgtttcttggagcgat
tctgaggacgaagatgaggaggaagaggcagaggcaaaggaaaagcccgaagctaatttt
ccgtcaccttttaccaacatcctctgtggaatcgtcttcgtggaaaggcgttatactgca
gttgttttaaacagacttatcaaggagggagggaagcaggacccagagctggcctacatc
agtagcaacttcatcacaggtcacagcattggcaagaaccagcctcgcaacaaacaaatg
gaggtggagttcagaaaacaagaggaggtcctgaggaagttcagagcccatgaaaccaac
ttgctcattgcaaccagcattgtggaagaaggcgttgatattccaaagtgcaatttggtc
gttcggtttgacctgccaacagagtaccggtcgtatgtgcaatccaaaggtcgcgcccgg
gctccagtctccaattacatcatgctagctgacagcgaacggacaaacacatttgaggaa
gacctcaagacctacaaggccatagagaagatcctccgaaataagtgctcgaagtcagca
gaatgcagtgattttgaactggagccagcgaccgatgatgacaacgttttaccaccttac
gtcctacgctcagaggacggcggcccccgtgtcacgattaacacagccattgggcacatc
aacagatattgtgctcgcttgcccagtgatccgttcactcatcttgctccaaagtgtaaa
actgtggagcttaagactggaggttatcagtccacactcttcctacccattaactcacca
ctcagagttcctgtcaccgggccaacaatgaattgtgcaagacttgctgagaaagctgtt
gctcttctctgttgtgaaaagctgcacaaaattggtgaactggatgatcatttgatgcca
gtgggaaaggaaactgtgaagtatgaggaggagctggacctgcatgatgaggaggagacg
aacgtgccaggaagaccaggctccaccaaacggagacagtgttacccaaaagccatacca
gagtgtctgcggggttgttaccctgtgccagaacagccttgctatctttacgtaataggg
atggtcctcaccacccctcttcctgatgagctcaacttccggcggaggaagctgtaccca
ccggaggacactacccgatgttttggcattctgacagctaaaccaatacctcggatccct
cacttccctgtgtatacacgttctggtgaggtgaccatttcgattgagctgcagaagtca
gactttactctgagcgcggagcagctggagctgatcacacgtttgcaccagtacatcttc
tcccacatccttcgtcttgaaaagccagcactagagtttaagcccgtagaggcagattct
gcctactgcattctacctctcaacattgttgaggattccaatacgttggacctggatttc
aagttcatggaggatattgaaaagtctgaagcacgtattggcattccaaatactcagtac
accaagaaaaacccattcattttcaaattggaggactaccaggatgctgtcatcattcca
aggtatcgtaattttgaccagccacatcggttctatgtggctgacgtttacacagacctc
accccactcagtaaattcccctctccagagtacgagactttcgctgagtactacaaaacc
aagtacaacctggacctgtctaatgttaaccagcccctactggatgtggaccacacatct
tcaagattgaatcttttaactccccggcaccttaatcaaaaggggaaagcccttcctctc
agtagtgcggagaagagaaaggccaagtgggaaagcctacaaaacaaacagattttagtt
ccggagctctgtgccattcaccccatcccagcctctttgtggaggaaagccgtctgcctt
cccagcattctctacagacttcactgccttctgacggccgaagagttgcggtctcagaca
gccattgacgctggtgtaggggctcagaccctgcctcctgatttcaggtatccaaatttg
gatttcggatggaagaaatccatcgatagcaagtctttcatttcctgccccagtgcatgt
atggaagacgacgatcactgtaaacacggcacaagctccgattcagaccacactgcccag
gagggctgcagtacggaggcctcccagcctccagagggcgctctcccctgtgagaactgc
aacacaccagatgaaaagctagaaacccaccctgtgctccctgtgactgatctccagacg
ccgaacaaagacaagagtgactgtgtctgttcccgaaacctcaacggcactcggagcgac
aacgacaaccttccacacagacgtgacatttgccaatgctctcagctgggccctctggag
agtgacctatcaacacaaaccactacctcagttcctgtgaggccctctctagccggcgag
ccacagccccagcccagcgatgaatgtaccccaggcaggaactcggatctctgcgacgga
catgtgaaaaaacctacctcaaactgttgccccaaaccagagatggcaaccagcaccaca
gcaccttcagaagtgtcatcagaggtctctgacgtgacatctacattagcctgcacaggt
ccagcctgggattctccgaaaaccttgggccccaaccccggcctcatcttgcaggccctg
accctctccaacgccagtgatggcttcaatctggagaggttggagatgttgggcgactct
ttcctgaaacacgcaatcaccacctacctgttctgcacttaccctgacgcccacgagggc
aggctgtcatacatgaggagcaagaaggtcagcaactgtaacctttatcgcctggggaag
aaaaagggccttcccagtcgaatggtggtatccatatttgatcccccagtaaactggctt
ccccccggctatgttgtgaatcaggacaaaagcagcacagacaagtgggactcagatgag
aataaagatttggccaatggaaaagccagtgatgatgaggatgatgacgatgaggcagag
gatgtggaggtcgagccgtctaaagaagaggtcaacgtggaagatgaactggagtactac
tatgagcacatcagattcatcgataacatgctgattggctccggtgccttcgggaagaag
atctccctccagccggccgagcctggctacgaatggaaagcccccaaaaaagctcacaac
tcccacttttccccagacggcggcactgacgagttcgattacagttcctgggacgccatg
tgctaccttgaccccagcaaagctggcgaggaggatgacttcgtggtgggcttctggaac
ccctccgaggaaaactgtggcacggatattgggaaacagtccatctcctacgaccttcac
actgagcagtgcatcgccgataagagcatagctgactgtgtggaggctctgatggggtgc
tacctcaccagctgtggggagagggcagcccagctgttcctgtgttccctcggcctgaag
gtgctcccggcagagaagcagagttcaggggggtcggccaagctgcagtacggctggctg
aagatccctccgcgctgcatgtttgaccacccggatgctgagcggaccctcaaccacctc
atctctggcttcgagaactttgagaagaagataaaatacacgtttaaaaacaaggcatat
cttctgcaggctttcactcacgcctcgtatcattacaacaccatcacagattgttatcag
cggttggagttccttggtgatgcaattttagactacctcataacaaagcacctttatgaa
gatccccggcagcactccccaggcgtgctgaccgacctgcgctctgcacttgtcaacaac
accatatttgcttccctggctgtcaagtacgattaccacaagtacttcaaagctgtctcg
cctgaactgttccacgtgatcgatgattttgtgcaatttcagctagagaagaatgaaatg
caaggaatggattcggagcttcgccgatcagaggaagatgaggagaaggaggaagacatt
gaggtccccaaagcaatgggagacatctttgaatcgctagctggtgcaatttacatggat
agcgggatgtcacttgagacagtttggcaagtgtattatccaatgatgaggccactcata
gaaaaattctccgctaatgtccctcgatccccagtgcgtgaactcctggagatggaacca
gagacggctaagttcagccctgcggagagaacctacgatggaaaagtacgggtgacggtg
gaagtggtgggcaaaggcaagttcacaggcgtgggacgcagctaccggatagccaagtca
gcggccgcccgccgagccctgcgcagtctcaaagccaatcaacctcaggtccaaaataac
tga
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