Sinocyclocheilus anshuiensis: 107671924
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Entry
107671924 CDS
T04917
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03030
DNA replication
sanh03410
Base excision repair
sanh03420
Nucleotide excision repair
sanh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107671924 (rfc1)
03410 Base excision repair
107671924 (rfc1)
03420 Nucleotide excision repair
107671924 (rfc1)
03430 Mismatch repair
107671924 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sanh03032
]
107671924 (rfc1)
03400 DNA repair and recombination proteins [BR:
sanh03400
]
107671924 (rfc1)
DNA replication proteins [BR:
sanh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107671924 (rfc1)
DNA repair and recombination proteins [BR:
sanh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107671924 (rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_5
AAA_30
AAA_7
AAA_33
AAA_16
Rad17
RuvB_N
BRCT_2
AAA_14
AAA_17
nSTAND3
AAA_18
NTPase_1
RNA_helicase
AAA_19
NPHP3_N
AAA_28
Motif
Other DBs
NCBI-GeneID:
107671924
NCBI-ProteinID:
XP_016320422
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MDIRRFFASTKPAAPKPSNGSTSTNEEQKKKQKSKPKVTSPTSDEKPSGKRKKRVIIDSD
SEEEKKTKRGTKETDAATVKKHPVTYVSDSDSKPKENGRAKGRKESDSGKAKQVKVSSSK
SPTKSPNTISKGGGKSSQSTISPKIGPTPPKQTPTSVMAFFGSSSVQRSDKKLVASTSTK
RKAPTQETEELLSDEVIAKELQMDEDMELEKQIHDDEEFARTLAMLDEAPLPKKARVDSV
SPSKSSSHAISSDTKPKKDPSPKKSPVKTSSKLAQMKRRQEEVKEQREKDRSEKQIKISP
KKEPISPTSSERAAMPKSSVSTGMTKSRNFSTPKSHSAPIKTSPTKPENTSPEDLEKKRA
NSSAYRNYLNREGPRALGSKEIPQGAENCLEGCVFVLTGVLESMERDDAKSLIERYGGKV
TGNISRKTTYLVLGRDSGASKTEKAESFGTKIINEDELLELIRTKPGKKSKYEIAAEAEN
KSSKTRTPDSRGKPTPPSKKATPQGPRPNKRSPSEGKSKPGSASKSGTLGASRSEVKKSL
SFDQSKRASPVSHSTPESEGSSLLWVDKYRPRSLKSLIGQQGDQSCANKLLRWLQNWHKH
HSSNTKAPSDKFGKFGSKDDGSGFKAALLSGPPGVGKTTTAALVCEELGYSYVEMNASCT
RSKNSLKEVIAESLNNTSIKNFYTGASQTVSSKHVLIMDEVDGMAGNEDRGGIQEMIGLI
KQSKIPIICMCNDRNHQKIRSLANYCYDLRFQRPRVEQIKGAIMSIAFKEGLKIPPPALN
EVILASNQDIRQVLHNLSMWSAKDKVMTYDQAKADANNAKKDMKLGPFDVCRKVFASGEE
TAHMSLIDKSDLFFHDYSLAPLFVQENYLHVRPAAAGGNLKNHLVLLSKTADSICDGDLV
DKQIRSRQAWSLLPTQAIYASVLPGELMRGYMSQFPTFPSWLGKFSSAGKHRRIIQELAS
HMSLKTLSSKEAINLDYLPYLRSAILEPLQSQGSEGASQSVKLMDDYDIIKEDVDNMMEI
SMWGGQPDPYSKLDSKVKAAFTRAYNKESHLTPYSLQVVKKSRKGAVDPELIGELESESQ
FQEEEEDDGVTADAMIKQKKAKPAKDVKQEKPGASGKGKGRGKGKAMK
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggatatccggaggttttttgcatccactaaacctgcggcccccaaaccttccaatgga
agcaccagcactaatgaagagcagaagaagaaacaaaaatcaaagcctaaggtcacaagt
cccacatctgatgagaaaccatctggaaaacgaaagaaaagagtcataattgattcagac
tctgaggaagagaagaagacaaagaggggcactaaagagactgatgccgccacagtgaag
aaacacccagtaacttacgtgtctgattctgattcgaaaccaaaagaaaatggaagagct
aaaggcaggaaagaatcagattcaggaaaagcaaaacaggtgaaagtctcatccagtaaa
tccccaaccaaatccccaaacaccatctcaaagggaggggggaagagctctcagtctacc
atctccccaaagatcggaccaacgccaccaaaacaaacacctacttcagtaatggccttc
tttggcagctcaagtgttcagaggtcagacaagaaactagtggccagtaccagcactaag
aggaaggcacccacacaggaaactgaggagttgctcagtgatgaagtcattgcaaaagaa
cttcagatggatgaagacatggagttggaaaagcagatccatgatgatgaggaatttgca
agaacattagccatgctggatgaagcgcccttaccgaaaaaggctcgggtggactctgtc
tccccctccaagagcagctctcatgcaatttcctcagacaccaaacccaaaaaggacccg
tcccctaaaaagagtcctgtgaagaccagctccaaactggctcagatgaaaagacgacag
gaagaagtgaaagagcaaagggaaaaagataggagtgaaaagcagattaagatttctcct
aagaaagagccaatctcacccactagctcagagcgggcagctatgcccaaaagtagcgtt
tccacgggaatgacaaaatcaaggaatttttccacgcctaaaagtcacagtgcacccatt
aaaacctcaccaacaaaaccagagaatacaagtcctgaggatctagagaaaaaacgggca
aattcatcagcctaccgtaactatttgaaccgagaaggaccacgagcactggggtctaaa
gagataccacagggagcagagaactgcctggagggttgtgtgtttgtgttgactggtgtg
ttagaatctatggagagggatgatgctaagtcactaatagagcgatatggtgggaaagtc
acaggaaacatcagccgtaaaactacttaccttgttctgggacgagacagtggagcctca
aagactgaaaaggcggagagttttggaactaagatcattaatgaagatgagttgttggaa
ctcataagaaccaaaccaggcaagaagtctaaatacgagattgcagcggaggcagagaat
aaatcctctaaaacaaggactccagactctagaggcaaacccactcctccatccaagaag
gccacaccacaagggccccgccccaacaagagaagcccttcagaggggaagtctaagcct
ggctctgcttctaaatctggaacacttggggcctctcgttcagaggtcaaaaagagtttg
agctttgatcaatccaagagagcatcccctgtatcccactctacccctgagagtgagggc
agcagcctgttgtgggtggataagtaccgcccccgtagtctgaagagcctgattgggcag
cagggggatcagagttgtgctaacaagcttctgcgttggttacagaactggcataaacat
cacagcagcaatacaaaagcaccatcagacaaatttggaaagtttgggagtaaagatgac
ggttctggatttaaggctgcattgttatctgggcctcctggtgttgggaagaccactact
gctgctctcgtctgtgaggagttgggttacagctacgtggagatgaatgcgagctgcacc
cgtagtaagaacagcttaaaggaagtgatcgcagaatcactcaacaacaccagcattaag
aacttctataccggtgcatctcagacagtgagcagtaaacatgtcctcataatggacgag
gtggacgggatggcaggaaatgaagacagaggaggaatacaggagatgattggtttgata
aaacagtcaaagattcccattatctgcatgtgtaatgaccgcaatcatcagaagatccgc
tcgctggctaactactgctacgacctgcggtttcagagaccccgtgttgagcagatcaag
ggggctataatgtctatagctttcaaagagggtctgaagatcccacccccagcacttaat
gaagtcattctggcgtccaatcaggatattcggcaggtactgcataatctgagcatgtgg
tctgctaaagacaaagtcatgacctatgaccaggccaaagctgatgctaacaatgcaaag
aaggacatgaaactgggtccatttgatgtgtgtcggaaggtgtttgcttcaggagaggaa
accgcccacatgtctttgattgacaaatcagaccttttcttccatgattactctttagca
ccactatttgttcaagaaaactacctgcatgtccgaccagctgctgcagggggaaatctg
aagaatcatttggtgttgttgagtaaaacagcagacagcatttgcgatggagatttagtg
gacaaacagatccgctccagacaggcatggtctctgcttcccacacaggcgatttatgcg
agcgtgttgccgggggagctgatgcggggttatatgagtcagtttccgacctttcccagc
tggttgggcaagttctcatcagctggcaaacacaggcgcatcatacaggagcttgcttca
cacatgagcctaaaaacgttaagtagtaaggaagccataaatctggattacctgccgtat
ttgcgctcagcaatattagagcctcttcagtcacaaggttcagagggagccagtcagagc
gtgaagctcatggatgattacgacatcatcaaagaggatgttgataacatgatggagatc
agcatgtggggcggacagccggatccttactctaaactagactccaaggtgaaagctgca
tttacaagagcctacaataaggaatcccatcttacaccgtactccttacaagtagtgaag
aaaagccgtaaaggtgctgttgaccctgagcttataggagagcttgaaagtgaatctcag
ttccaggaagaggaagaagacgatggggttacagcagatgcaatgatcaagcagaagaaa
gctaaaccagcaaaagacgtcaagcaagagaaaccaggggcttctgggaaggggaaaggc
aggggtaaaggaaaggccatgaagtga
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integrated database retrieval system
