Sinocyclocheilus anshuiensis: 107672237
Help
Entry
107672237 CDS
T04917
Name
(RefSeq) LOW QUALITY PROTEIN: C-myc promoter-binding protein-like
KO
K20163
DENN domain-containing protein 4
Organism
sanh
Sinocyclocheilus anshuiensis
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sanh04131
]
107672237
Membrane trafficking [BR:
sanh04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
107672237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
DUF2464
Motif
Other DBs
NCBI-GeneID:
107672237
NCBI-ProteinID:
XP_016320820
LinkDB
All DBs
Position
Unknown
AA seq
1709 aa
AA seq
DB search
MEDKSLRVADYFVVAGLTNSSKPLEEDVHPEDGGHRSSAQLKAPITDVAVMIRSLGEEVP
RGYTCVECTPSGLPAELNGGSLMGPQIFLCYKRGRDKPPLTDLGVLFEWKEKLKPDCQII
QTTPSGRPANISSSSSQRIYITYRRASENHSHTTLAVTDICVIVPGKGETPPHAFCKVDK
NLNSSMWGSSVYLCYKKSLAKTNTLAFKAGLLSRYPEEDYESFPLPESVPLFCLPMGASI
ECWPSHTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPEEHLTDKQRSQLGLQANGLRP
DGSMTVHTNKSICLLSHWPFFDAFHNFLTFLYRYSISGPHTLPIEKHISHFMHKVPFPSS
QRPRILVQVSFVHMVSLFEHCPSXIGGRISTLLLNLGPKNAVTLLVLAVTEHKILVHSLR
PAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYEPPTDI
SCVDLDTNTITHKEERRSLTWKILPRKACKRLINTLSNLHQQLDEGYQMSREEGQMEAFM
SEREPGSGGKSLETLELEIQEAFLRFMAAILKGYRSYLLPITQAPSEKATDASSLFDLQG
FLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKLFGTEKGEKVDS
EKPEDTRLIELDKSYRSEHTVYITPPELPALPEGEEAPMVYSYSGFPVLNAQLCELQDGP
RVPKATSAMRHISPISPAAIFRRSQQEIKSAQRMAKTYSSIPQMWSKCLLRHCHGLWFIC
LPSYVSACHSKVRALHTAYDVLRNMQDKKLQPPDEVCYRVLMQLCGQYGQPVLAVRVLFE
MKKAGVQPNAITYGYYNRAVLESTWPSSTRGGYFLWGKLRNVVQGVVRFKQVWRKQTTHP
KDTHLSDASDLDSVSHGSLDSSNDSAERVSIDTDFTKMDSSDDRSSTGGQSDQGYDSLSK
EEVRLGGGEEQNSPDMKEKKDNSCPLSQTVLSKKEDSSLVVGIHPSATNEETSNVFSEVL
PKTKRPNSLDIFGDKPVRPSTVRELSNESVPTLIETEAVWGIVSPPKVAVERTASCTVTM
EKRVAMEREHISVERSVSCSSALGQVVKRTGIEAGFDPLSLMAAETQAHSEGDNADTPTA
HRDLAEEIHHYMNNLSSPLSQRSLSVDLKGRQTPSPHSSPRMSAALSSPSTSQLQPQPRT
RLFSSPSLPQGRVRRVREQRPTSLASPSSPIPSSSFSMDSLLTPTLDVFKSSFLSAGKGV
AEKASRLYSRLSSQSSIAQDLNSDRVSVSSLGSGDPDCSSLIESDSCVDPDGLTSPQRDT
TQPVTCPKRSPYRSSHCLESPSAPRRLYRQSSLTGPSLSVMKALQTPDACSDSSLSQSMQ
NYAVEVRMSSCSRCNTCESLVYDEEIMAGWTADDSNLNSTCPFCGSPFLPLLNVDIRNLG
DQERSPSQDAHTCQTDTTDELPQVYDATGNLSSNGKKGPEPVTMPYLSPLVLWKELESLL
VNEGDQAISSAAIVDHHPIVFWNLVWFFRRLDLPSSLPGLYLSSKHYCRDSQPLQSCASE
DSKNVLVQILWDNPRLHQDHIKPCYLLWKSYCANPAASEEEEQAVSLELLQSVVKSIQRN
DIYQPMSQILQLLGTKLGFVRQRSLYRDILFLSLVALGKNSINIDAFDREYKMAYDRLTP
SQVKMTHNCDRPPSAGVMECRRTFGLPSL
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaagccttcgtgtagcagactactttgtggtggcaggactcaccaactca
tctaagcccctcgaggaagatgtccaccctgaggatggtggtcatcggagctcagcccag
ctcaaggcacccatcactgatgtggcggtgatgattcgctccctaggggaggaagtacct
cgagggtatacctgcgttgaatgcaccccctctggacttcctgccgaactaaatggagga
agcctcatggggccgcagatcttcctctgctataagagaggcagagacaaaccgccgctc
acagacctgggtgtcctctttgagtggaaggagaaactgaagccggactgtcaaattata
cagaccacgccctctggtcgccctgctaatatcagtagctcctcttcccaaaggatctac
atcacatatcggcgtgcctctgagaatcactctcacaccacgctggctgtcacagacatc
tgtgtcattgttcccggcaagggagagacaccaccacatgctttctgcaaggtggacaag
aatctcaacagcagtatgtgggggtcctctgtgtacttgtgctacaaaaaatctttggcc
aaaaccaacacacttgcattcaaagcaggtcttttgtccagatacccagaggaggattat
gaatcctttcctttgcctgaatccgtgcccctgttttgcctgccgatgggagcgtccatt
gagtgctggccttctcataccaaatattctctacctgtcttttcaacattcgttctcaca
ggcgcctctggagagaaggtttatggtgccgccatccagttctatgagccctacccggaa
gaacatttgactgacaagcagcgatctcagctgggcctgcaggctaacgggctcaggcct
gatggatcgatgactgtccacaccaacaaaagcatctgccttctctctcactggcccttt
tttgatgctttccataacttcctgaccttcctctacagatactccatctcaggtccacac
actctgcccatcgagaagcatatttcccatttcatgcacaaggttcctttcccttcctca
caaaggccacgtatcctggtgcaggtgagttttgtgcacatggtgtctttgtttgaacac
tgtccttcttgaattggcggaaggatctctacactgctgttgaacctcggcccaaaaaat
gcagtgactctgctggtgttggctgtgactgaacacaagatcctagtgcactccttacgt
ccagccgttcttaccagcgttaccgaggccctggtgtcgatgatttttcccttccactgg
ccatgcccgtacattcctctctgcccgctggccctggcagatgtactcagtgctccatgc
cctttcattgtaggggtggactcacggtactttgacctctatgagccaccgacggacata
agctgtgtggacctggacaccaacactataactcacaaagaagagcgcagatccctgacc
tggaagatcctgccaagaaaagcctgtaaacgtctgatcaacaccctcagcaatctccac
cagcaactggatgagggttatcagatgagccgcgaggaaggacagatggaggcctttatg
agcgagcgggaacctggcagtggtgggaagagtctggaaaccttggagctggagatccag
gaggcttttctgcgcttcatggcggccatcttgaagggctaccgttcatacctgttgccc
atcacacaggcaccatctgagaaagcaactgacgccagttcactcttcgatctgcaaggc
tttttgaagagtcgtgatcgatcccatcaaaagttttactccctcatgaccaagacacag
atgttcattcgtttcatcgaagagtgctcttttgtcagcgataaggatgcaagccttgct
ttctttgatgactgcgttgacaagttgttcggtacggagaaaggagagaaggtggacagc
gaaaagccagaagacacaaggcttattgaacttgacaaatcctaccgcagcgagcacacg
gtctacatcacacctccggagctgccagcacttccagaaggagaagaggctcctatggtt
tatagctacagtgggttcccggtactgaacgcccaactctgtgagcttcaggatggtccc
agagtccccaaagcaacatcagccatgagacacatcagtcccatcagcccagctgccatt
ttcaggcgctcccaacaggagatcaaatcagcccagagaatggctaagacatactcctcc
atcccacagatgtggtccaagtgtctgctcaggcattgtcacggcctgtggttcatctgc
ctgccctcgtatgtcagcgcctgccactctaaagtgcgggcactgcatactgcttacgac
gtgctgcgaaacatgcaggacaaaaagttgcagcctcctgatgaggtgtgttaccgggtc
ctgatgcagctgtgtgggcagtatggacagcctgttcttgccgtccgggttctttttgaa
atgaagaaagccggagtgcagccaaatgccattacctatgggtactacaacagggctgtt
ctggagagcacatggccttcctccaccagagggggatacttcctgtggggaaagctgaga
aatgtggttcagggtgtggtgcggttcaaacaagtatggaggaagcagaccacccacccg
aaggacacccatctttctgatgccagtgatctcgacagtgtcagccatggcagtctggac
agctctaacgattcggcggagcgagtttccattgatacagacttcactaaaatggattcc
agtgatgacagatccagcacaggtggtcagtctgatcagggctatgattctctgtctaaa
gaggaggtgaggttaggaggaggtgaggagcagaactctccagacatgaaggagaagaag
gacaactcttgcccattatcccagactgtactctcaaagaaagaggattcatctcttgtg
gttgggatccatccatctgcaaccaatgaagaaaccagtaatgtcttttctgaagtcctt
ccaaagacaaaaaggccaaactccctggatattttcggagacaagcccgtaaggccaagc
acagtaagagaactcagtaatgaatctgttccaacattgatagaaacggaagcagtgtgg
ggcattgtgagcccacctaaagttgccgtggagaggactgctagctgcacggttaccatg
gagaagagagttgccatggagagggagcatatcagcgtggagaggagtgtgagctgcagc
agtgctcttgggcaagtggttaagaggaccggtatcgaagcaggttttgatcctctgtcc
ctcatggcggctgagactcaagcccacagtgagggcgataatgcagacaccccaaccgcc
catcgagacctggctgaagagattcatcactacatgaacaacctgagcagcccgttaagc
cagcggtctctcagtgtggacctgaaggggcgtcagaccccatcccctcacagctctccc
cgcatgtccgcagcgctcagctcccccagcacctcccaactccagcctcagccacgaaca
agactcttctcgtcgccctccctccctcagggccgtgtgcgcagggtcagggaacagcgg
cccacctctctggcctcaccttcctcacctattccctcctcttctttctccatggactcc
ttgctcaccccgaccctggacgtgttcaagagcagctttctctctgctgggaagggcgtc
gctgagaaagccagccgactgtattcgcgactttcctctcagtcgtccattgcacaggac
ttaaattctgaccgggtcagtgtgtcctctctggggtcaggtgaccctgattgctcctct
ctgattgagagtgattcctgtgtagaccccgatgggctcacttccccacaacgggatacc
actcagcctgtcacatgtcccaaaaggagcccttacaggagcagccactgcctagaaagc
ccatctgcaccacgtcgactttaccgccagtcctcgctaactggtccatcgttgtcagta
atgaaagctctgcagaccccagacgcgtgttctgattccagcctttctcaatccatgcag
aactacgctgttgaagtacgtatgtccagttgttcgcgctgtaacacctgtgagagtttg
gtgtatgatgaagagatcatggctggttggacagctgacgattctaacctcaatagcacg
tgccccttttgcggctctccgtttctgcctctgctcaatgtggacatcagaaacctgggt
gaccaggaaagatctccctctcaagatgcacatacttgccagacagacaccacagatgaa
ctaccacaagtttatgacgccactggcaatctatccagcaatggcaaaaaaggccctgag
ccagttaccatgccctacctgagtcctctggtgctttggaaggaactggaaagcttgctg
gtgaacgagggcgaccaggccatctcgtctgcagccattgtggatcaccaccctattgtg
ttctggaatctggtgtggtttttccgtaggctggacctgcccagcagcctgccgggcctc
tatttgagctccaaacactactgcagagattctcagcctctgcaaagttgtgcatcagag
gacagtaaaaatgtcttggtccagatcctgtgggacaatcccagactgcatcaggaccac
atcaagccttgctacttgctctggaaatcatattgtgcaaatcctgcagcatctgaggag
gaggagcaggctgtgagcttagagctgctgcagagtgtcgtgaagagcatccagaggaac
gatatctaccagcccatgagtcagatactgcagctactgggcaccaaactgggcttcgtc
agacaacggagcttatatagagatatcctgttcctgtctttggtggctttgggcaagaat
agcataaatatcgatgcattcgaccgtgaatacaaaatggcatatgaccgtttgacgcca
agccaggttaagatgacccacaattgtgaccggccacccagtgctggagtcatggaatgc
aggagaacctttgggctgcccagtctctga
DBGET
integrated database retrieval system
