Sinocyclocheilus anshuiensis: 107674042
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Entry
107674042 CDS
T04917
Name
(RefSeq) polypyrimidine tract-binding protein 1-like isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
sanh
Sinocyclocheilus anshuiensis
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107674042
03041 Spliceosome [BR:
sanh03041
]
107674042
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107674042
Spliceosome [BR:
sanh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107674042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107674042
NCBI-ProteinID:
XP_016323392
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MDGRLDTDLYPLGSSYVTEIDSVHDITVGTKRGSDELFSSCISNGPYIMSSGAANGNDSK
KFKGDIRSPGIPSRVIHVRKLPNDINEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTEE
SAQTMVSYYSSVTPVIRNHPIYMQYSNHKELKTDNSPNQVRAQAALQAVNAVQTGSMSLS
TVDGAGMGSQSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALVQYSD
GMTAQHAKLSLDGQNIYNACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTGDSQPSLN
AQTMAAAALTAPGIISASPYAGAHGFPPTFAIQQAAGLSLQGMPAGAFASLGVPGAAAAA
AAAAAAGRLSLSGYTAGGNSVMLVSNLNPESVTPQCLFILFGVYGDVMRVKILFNKKENA
LVQMSDGTQAQLAMSHLNGQKLYGKALRVTXSKHTTVQLPREGHEDQGLTKDYSNSPLHR
FKKPGSKNYSNIFPPSSTLHLSNIPPSVTEDHLRGLFLSSGAVVKAFKFFQKDRKMALIQ
LGSVEEAIESLIKFHNHDLGENHHLRVSFSKSTI
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggacggccgtttagacactgatctgtatcctctgggatccagttacgtcactgaaata
gacagtgtccatgatataacagtcggcacaaagaggggatctgacgaactcttttcctct
tgcatatctaacggcccttatataatgagctctggagcagcaaatggtaatgacagcaag
aagttcaaaggggacatcaggagcccaggcattccttcacgagtcattcatgtacgcaaa
ctgccaaatgacataaatgaagcagaagtcatttctttggggcttccctttggcaaagtg
accaaccttctgatgctgaaaggaaagaaccaggccttcctggagatgaacactgaggag
tcagcacagaccatggtcagctactactcctctgtcacccctgtcatccgcaaccacccg
atctacatgcagtattccaatcacaaggagctaaagactgacaactcacccaaccaagtt
agagcacaggcagcactgcaggcggtgaatgcggtccagacgggaagcatgtctttgagc
acggttgatggagcaggcatggggagtcagagcccagtgctgagagtcattgttgaaaac
ctcttctatccagttactcttgatgtccttcaccagatcttctcaaagtttggcacagtt
ttgaagattataacctttaccaaaaacaaccagttccaagcactggtccaatactcagac
ggaatgactgctcagcatgcaaaactgtctttagatggacagaacatctacaatgcctgc
tgtacccttcgcatcagtttctctaagctcaccagcttgaatgttaagtacaacaacgat
aagagcagggactacactcgccctgacttgcctacaggagacagtcaaccctccctcaat
gcacagacgatggctgcagctgccttgactgctcctggtatcatctctgcatcaccatat
gctggggctcatggttttccaccaacgtttgccattcagcaggcagcaggtctgtctctg
cagggtatgcctgccggggctttcgcgtcgctcggtgtccctggtgctgcggcagccgcc
gctgctgcggctgctgcaggacgcctgagtctttcaggttataccgctggaggaaacagt
gtcatgctggtcagcaaccttaaccctgagagcgttacgccccaatgcctctttattctt
ttcggtgtgtatggtgatgtcatgagagtgaagatcctattcaacaagaaagagaatgct
ttggtgcagatgtccgatggaacccaagcccagctagccatgagccacttgaatgggcag
aagctgtatgggaaggctttgcgggtcactcnttccaaacacaccactgtgcagctgcca
cgtgaaggccatgaggatcaggggctcaccaaggactacagcaactctcctcttcaccgc
ttcaaaaagccaggctccaagaactactccaacatcttccccccttcctctactctccat
ctttccaatataccaccttctgtcactgaggatcatctcagaggcttgtttctaagttca
ggagcggtggttaaggcctttaagtttttccagaaagaccgaaaaatggctctcatccag
ttgggctctgtggaggaagcaatcgagtctctgatcaaatttcacaatcatgacctggga
gagaaccatcacctcagagtgtctttctccaagtccaccatctga
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