Sinocyclocheilus anshuiensis: 107674220
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Entry
107674220 CDS
T04917
Name
(RefSeq) huntingtin-like isoform X1
KO
K04533
huntingtin
Organism
sanh
Sinocyclocheilus anshuiensis
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107674220
04131 Membrane trafficking [BR:
sanh04131
]
107674220
03029 Mitochondrial biogenesis [BR:
sanh03029
]
107674220
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107674220
Membrane trafficking [BR:
sanh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107674220
Mitochondrial biogenesis [BR:
sanh03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
107674220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_2
HEAT_EF3_N
HEAT_ECM29
Vac14_Fab1_bd
MNE1
Motif
Other DBs
NCBI-GeneID:
107674220
NCBI-ProteinID:
XP_016323619
LinkDB
All DBs
Position
Unknown
AA seq
3118 aa
AA seq
DB search
MATMEKLMKAFESLKSFQQQQGPLSAEELVQKQKKDLATTKKDRVTHCLTICENIVAQSL
RTSPEFQKLLGIAMEMFLLCSDDKESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIK
KNAASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRITKRQEETVQETLSSSIPKI
MAALGHFANDGEIKMLLRAFVANLRSSSPTIRRTAASSAVSVCQHSRRTHYFYTWLLNVL
LSLVVPVDEEHSSHLILGVLLTLRYLMPLLQQQAPNTSLKGSFGLVRKEADITPTPEQLI
QVYELTLHYTQHWDHNVVTASLELLQQVFRTPPPELLNALITRGKISHTSVFREETECRA
RSGSILELIAGGSTCSPLLLRKQKGKLLSGEEEGLEDDPERAEVTTGSFSASVGGDSSSE
APSSSGVSSLGTSDIITEQPRSSQHALQPGDSVDLSASEQGVGPDTPDEEDEEDMLSRSS
SGGAGVVSTSGDLVTDGNQMSTGAVSSPPSDSSQTTTEGPDSAVTPSDCAELVLDGSDSQ
YSGMQIGTLQDEEEEGAAPPPDKPLEPFSQSALALSKPHLLEGKGHNRQSSDSSVDRFIP
KEEVLEPAELDNKPSRIKGDIGHYTDPKEEPLVHCVRLLAASFLFTGQRNGLVPDNEVRV
SVKALAISCVGAAATLLPEAFFNKLYLQPLEGQEPDEQQYISDILQYIEHGDPQIRGATA
ILCGALIQAIQLNTRYNTETWLSQIHSITGNSMTLENFVPLLQRSLKDESSVTCKMACAA
IRHCIMALCSGSLSELGLQLLIDLLTLKDCSYWLVRTELLETLAEIDFRLVSFLERKTEK
LHKGEHHYTGLLRLQDRVLNDVVLYLLSDEDPRVRHVAANTISRLVPRLFFDCDQAQTDP
VVAIARDQSSVYLQLLMHETQPPSQFTVSTITRTYRGYNLGQSAPDVTVENNLSRVIAAI
SHALTSSTSRATTFGCCEALCLLSSTFPVCTWSTGWHCGFVCSSVFHLNRSSQYRSRGRS
FSLSQPGGSEDMRRSLTVGVASMVLSLISSAWFPLDLSAHQAALLLAGNLLAAVAPKCMK
SPWAGEEESNPAPSKVEEAWSALNDRSLVVMVEQLFSHLLKILNICAHVLDDIPPGPAVK
ATLPSLGNTPSLSPIRRKGKEKEMTEPSTTPMSPKKGGEANTGRSADSTATPAVNKSTTL
GSFYHLHPYLKLYDALRATHANYKVTLDLHNTNEKFGSFLRSALDVLSQLLEMATLHDIG
KCVEEILGYLKSCFSREPTMATVCVQQLLKALFGTNLASQYEGASSHPCRSQGKALRLGS
TSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEQDTSGWFDVMQKVSNQLRSSITN
VTRHRGDKNAIHNHIRLFEPLVIKALKQYTTSTSVALQRQVLDLLTQLVQLRVNYCLLDS
DQVFIGFVLKQFEYIEVGQFRHSEEIVPNIFFFLVLLSYERYHSKQIISIPKIIQLCDGI
MASDRKAVTHAIPALQPIVHDLFVLRGSNKADAGKELDTQKEVVVSMLLRLIQHHQVLEM
FILVLQQCHKENEDKWKRLSRQIADIILPMIGKQQMHLDSHEALGVLNTLFETVAPSSLR
PVDMLLKSMFITPSTLASVGTVQLWVSGILAVLRVLISQSTEDIILSRIQELSLSPYLLS
CPTIRRLCDDDPSPPEAPPTTMEDANGEPQRVPPEETFARFLLQLVGVLLDDIATKQVKV
DMSEQQHTFYCQQLGTLLMCLIHIFKSGMFRRITAAGSRLLKAEEEEGGNFYALEGLNSL
VLQLITTHPSLVLLWCQVLLIINYTNYTWWSEVHQTPRRHSLSSTKLLSPHSSGEEERPE
GKLAMCNREIVRRGALILFCDYVCQNLHDSEHLTWLTVNHVSDLISLSHEPPVQDLISAV
HRNSAASGLFIQAIQSRCDNLSTPVMLKKTLQCLEGIHLSQSGALLMLYVDKLLNTPFRV
LARMVDTLACRRVEMLLAETLQNSIAQLPLEELDRIQQYLQTSGLAQRHQRFYSLLDRFR
DTVAEDTTSPAAPITSHPLDGDPPPPPENVEPNKEWYVALVKSQCCLRREGALYETTELL
TKLPQSDLNAIMTCKDFNLCLLASCLSVGVQRVCKDHGTVIFDTAQQVAFERLAGVIELL
PSPHQPLLPSSKMCADYWQKLNQVYSEPGFYQTVLSLCGVLSQYLLSLSKLPSSLHIPKD
KETLITTFSTLAIEVVVWRLLQDQLPLSVDMQMSLSCLCLALQQPAVWTHFASHTYLTHT
CSIVHCIQLLIHAVAVGPGDQLLRPERKTEQSEDQLDAADKQLEWRCCEIMAELVEGLQS
VLALGHHRNKNIPAFLTPTLRNVIISLARLPIVNSYTRIPPLVWKLGWSPRPSGEFGTAL
PEIPVEFLQEKDVFREFLYRINTLGWSSRTQFEETWATLLGVLVTQPITMDQEEETQQEE
DMERTQINVLAVQAITSLVLSAMTLPTAGNPAVSCPEQQARNKSLKALDTRFGRKLSVIR
GMVEREIQAMVSKRDNIATHFPYHAWDPVPSLSSSTAGTLISHEKLLLQINTEREMGNMD
YKLGQVSIHSVWLGNNITPLREEEWGEDEEDEADAPAPASPPLSPINSRKHRAGVDIQSC
SQFLLELYSQWILPGSPSSKKTPVVLLSEVVRSLLAVSDLFTERNQFDMMFSTLTELQKV
HPPEDEILNQYLVPAICKAAAVLGMDKAIAEPVCRLLESTLRSTHLPSRIGALHGVLYVL
ECDLLDDTARQLIPTINEYLLSNLRAIAQCVNLHNQQHVLVMCAVAFYMMENYPLDVGPE
FNAGIIQLCYMMLSASEEATPSIIYHCILRGLERLLLSEQLSRVDTETLVKLSVERVNMP
SPHRAMAALSLMLTCMYTGVAGEEGKEKGSPGRPVDTDPTAPDSESVIVAMERVSVLFDR
IRKGFPSEARMVSRILPQFLDDFFPLQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLH
ATGQSSMVRDWVLLSLSNFTQRTPVAMAMWSLSCFFVSASTSQWISALLPHVISRMGKSD
TVDISLFCLVAMDFYRHQIDEELDRRAFQTVFEMVASPGSPYYQLLCCLQSIHQDMSL
NT seq
9357 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagctgatgaaggcgtttgagtcgctcaaatcattccagcagcag
caaggcccgctgtcggccgaggagctcgtccagaaacaaaaaaaagaccttgctacaacc
aaaaaggacagagtgactcattgcctgacgatatgtgaaaacattgtggcacagtcgctg
aggacatctccagagttccagaaacttctcggaatcgctatggaaatgttcttgttgtgc
agtgacgacaaggagtctgacgtcaggatggtggcagatgagtgcctcaacaaaatcatc
aaagcattgatggattccaacttgcctaggctgcagcttgaactgtacaaagagattaaa
aagaacgctgcctctcggagtctgcgtgcagccttgtggaggtttgctgagcttgctcac
ctagtgcgtccacagaaatgcaggccgtaccttgtgaatctgctgccgtgtctgacgcgg
atcacaaaacgtcaggaggagactgtgcaggaaactctttcttcttcaattcctaaaatc
atggctgccctgggtcacttcgccaatgatggagagatcaagatgctgttgagggccttt
gttgccaatctgaggtccagttctcctactattcgccgaacagcggccagctcggctgtc
agcgtgtgtcagcactcacgcagaacacactacttctacacctggctcctcaacgtgctg
ctcagtttggtagtgccagtggatgaggaacattccagtcacctgattctgggtgtatta
ctgacgttgcgctacctgatgcctcttcttcagcagcaggctcctaacaccagcctgaag
ggcagctttggtcttgttcgtaaagaggcagacatcacccctacacctgagcagctcatt
caggtctatgaactgaccctgcactacacgcagcactgggatcataatgtggtgacagca
tctttggagcttctgcagcaggtgtttcgcactcctccccctgagctcttgaacgcactc
atcacacgtggcaaaatatcacacaccagtgtctttagagaagagacagagtgccgtgca
cgaagtggcagcatcctcgagcttattgctggtgggtcaacatgcagtcctctcctcctc
aggaagcagaaaggtaagctgttgtcaggtgaagaggagggtttggaagatgaccctgag
agggcagaggtcaccacaggatcattctctgcctcggttggtggcgacagctccagtgaa
gctccctcctcatcaggtgtttcgtctcttggcacatctgacatcatcacagagcagcca
cgctcctcccagcatgccttgcagccgggagactcagtggacctgagtgcatcagagcag
ggtgtagggcccgatactccagatgaggaagacgaggaggacatgttaagtcgcagctca
agcgggggcgctggggtcgtcagcacgtccggtgacttagtaaccgatgggaaccagatg
tcgacgggagcagtgtcatcgccccctagtgatagttcccagacgactacggaggggccg
gactccgccgtgacgccttcagactgcgccgagctcgtgctggacggcagtgatagtcag
tactcagggatgcagatcggcacactgcaggatgaggaagaggagggcgcagctccaccg
cctgataaacctctagagcctttctctcagtcagcactggctttaagtaagccgcatctt
ctggagggaaaaggtcacaacaggcaatcatctgatagcagtgtggatcgattcatacca
aaggaagaggttctggaacccgcagaactcgacaacaagccatctaggattaaaggagat
attggtcactatactgacccaaaggaagagcctctggtgcactgtgtccggctgttggct
gcctccttcctgttcaccggccaaagaaatggtctggttcctgataatgaggtccgtgtg
agcgttaaggcattagccattagctgtgtgggggcagcagcaactcttctacccgaagcc
ttcttcaacaaactctacttgcagccacttgaaggacaagaaccagatgagcaacagtac
atcagtgatatactgcagtacattgaacatggggatcctcagatcagaggagccacagcc
atcctgtgtggggctttaatccaagccatccagctcaatacacgctacaacacggagaca
tggctgtcccagatccactccatcacaggaaactctatgacactcgaaaactttgtgcct
ctgctgcagcgaagtctgaaagatgaatcttcagtcacatgtaaaatggcctgtgctgct
attaggcactgtatcatggcgttgtgcagtggcagtctaagtgaacttggcctgcagctg
ctcattgatctgctgaccctgaaggactgctcctattggctggttcgcactgagcttttg
gagacgcttgctgagattgatttccggttagtaagtttcttggagagaaaaactgagaag
ttgcacaaaggagagcatcactataccgggttgttgaggctccaggacagggttctaaat
gatgttgtgctttatctactgagcgatgaggacccgcgtgtgagacatgtggcagcaaac
accatcagcaggttggtgcccaggttgttctttgactgtgaccaggctcagacagacccg
gttgtggcaatagctcgagatcagagcagtgtgtacctgcagctgctcatgcacgagacc
cagcctccatcacagttcactgtcagcactattacacgaacataccgtggctacaatctg
ggtcagagcgcaccggatgttacagtggagaacaacctatctcgggtcatcgctgccatc
tcccacgccctcacctcttccacttccagagccaccacctttggctgttgtgaggctctg
tgccttttgtccagcaccttcccagtgtgcacttggagcacaggctggcattgtggcttt
gtgtgctcttctgtctttcatctcaaccgctccagccagtaccgcagccgaggacgttcc
tttagtctttctcagcctggtggtagtgaggacatgcgccggtctctgacggtcggtgtg
gccagtatggttttgtctctcatctcctctgcctggttccctcttgatctgtctgcccat
caggctgctctgttactggctggaaaccttctcgcagctgttgcaccaaagtgcatgaag
agcccgtgggcaggtgaggaagagtctaaccccgccccctcaaaggtagaggaggcgtgg
tctgctcttaacgaccgctctctggttgttatggtggagcagctgttctcacacctgctg
aagatccttaacatctgtgcccatgtgctggatgacatacccccaggccctgcggtcaag
gctactttaccctcattgggcaacactccatctctcagtccaatcagacggaagggtaaa
gagaaggagatgacggagccgagcaccacccccatgagcccaaagaaaggaggagaagcc
aacacaggcagatcggcggacagcacagcgacaccagcagttaacaaatccaccactctg
ggcagcttttatcacctccatccttatctgaagctttatgatgcactgagagctacacat
gctaactacaaagtcacattagaccttcacaacactaatgagaagtttgggagtttcctg
aggtcggcgcttgatgtcctttcacagctgcttgagatggccaccctgcatgatattggc
aaatgtgtcgaagagatcctgggttacctcaagtcctgtttttcacgggaacccactatg
gccactgtgtgtgttcagcagctgttgaaggcgttgtttgggaccaatcttgcatctcag
tatgagggggcttcatctcacccatgtcggtcccagggcaaggccctccggctcggctcg
accagtgtcagacccggcctctaccattactgtttcatggccccatacactcactttact
caggccctcgcagatgccagcctcagaaacatggtgcaagctgaacaagaacaggacacc
tctgggtggtttgatgtcatgcaaaaagtctccaatcaactgaggtcaagtatcaccaat
gttactcgccaccgaggagacaagaatgccattcataatcacatccgtttgtttgagccg
ctggtgattaaggctctgaagcagtacaccaccagcacctcagtggccctacaaagacag
gtgctggacctactcacccaacttgtgcagctccgggtcaactactgtttgcttgattca
gaccaggtattcattggtttcgtgctgaagcagtttgagtatattgaagtggggcagttt
aggcactctgaagagattgtgcccaacattttctttttcctggttcttctgtcctatgag
cgctaccactccaaacagatcatcagcatcccaaagatcatacagctgtgtgacggcatt
atggccagcgacaggaaggcagtaacacacgcaatccctgcactgcagcctatagtacac
gacctctttgtgctgcggggctccaataaagcagatgcagggaaggaactggacactcaa
aaggaggtggtggtgtctatgctgctacgcctcatacaacaccatcaggtgctggagatg
tttattctagtcctacagcagtgccataaagagaatgaagataagtggaagaggctttca
cgacagattgctgacatcatccttccaatgatcggcaaacagcaaatgcacctggactcc
catgaggctttgggtgtgttaaacacactgttcgagacagtggctccctcctctctgcgg
cctgtggacatgctactgaagagcatgttcatcacaccttctacactagcatcagtgggt
acggttcagttgtgggtgtctgggattctcgccgtcctgcgcgtcctcatctcacagtcc
acagaggacatcattctgtctcgtattcaggagctttctttgtcgccatacctcctttcc
tgtcccaccatccgtcgattgtgtgacgatgacccctcccctcctgaagccccgcccacc
accatggaagacgccaatggagagccgcagcgcgtccctcctgaggaaacgtttgctagg
ttcttattgcagttagtgggggtgttgctggatgatatcgccactaaacaggtgaaagtt
gatatgagtgaacaacagcacacgttctactgtcagcaactgggcacactgctcatgtgt
ttgatccacatcttcaaatcaggaatgttccggcggatcacggcagcgggcagcaggctg
ttgaaggcagaggaagaggaagggggtaatttttatgctttggagggtttgaacagcctg
gtgctccagctcatcactacacacccatctctggtcctgctctggtgtcaggtccttctc
atcatcaactacaccaactacacctggtggtcagaggtgcatcagacacccaggaggcac
agtctgtccagcactaagctgctgagtccgcactcatctggagaggaggagagacccgag
gggaagttggctatgtgtaacagagagatcgtccgacgaggagcacttatcctcttctgt
gactatgtgtgtcaaaacctgcatgactctgagcatctgacgtggctgacagtgaatcat
gtgagtgatctgatcagtctttcccatgagcctccagtgcaggatctcatcagtgctgtg
caccgaaattcggcagccagcggactcttcatacaggctatacaatcacgctgcgacaac
ctttctactccggtaatgctgaagaagaccctgcagtgtctggagggcattcatctaagt
cagtctggggctctgctaatgctatacgtggacaagctactcaacacgccgttccgtgtg
ctggctcgcatggtggacacactcgcctgcagacgtgtggagatgctgcttgccgagacc
ttgcagaatagtatcgctcagctgccactggaggagctggacaggattcagcagtacctg
cagaccagtggccttgcgcaaaggcatcagcggttctactcactactggacaggttcaga
gacactgttgctgaagataccacgagccctgccgcccccatcacatcgcacccactggat
ggggacccaccccctccccctgaaaatgtggaacccaataaagagtggtatgttgctctg
gtgaaatctcagtgttgtttgagacgtgaaggagctctatatgaaactacagagctgctg
acaaaacttcctcaatctgacctgaacgcaatcatgacctgcaaggactttaacttgtgt
ctgctggcttcatgtctgagtgttggggtacagagggtgtgtaaggatcatgggacggtt
atatttgacacagctcaacaggtggccttcgagcgattggctggtgtcattgagctcctc
ccttcccctcatcagcccctcctaccctcctccaaaatgtgtgcggactattggcagaag
cttaatcaagtctacagtgagcctgggttttatcagacagtgttgagtctgtgtggcgtg
ttgagtcagtacctgctgtctctgtccaaactgccgtcctcactgcacattcccaaagac
aaagagacactcattaccaccttcagcaccctcgccatagaggtggtggtttggcgtttg
ctgcaggatcagctgcctctgagtgtggacatgcagatgagtctgtcgtgtctgtgtctg
gctctccagcagccggcggtgtggacacacttcgcctcacacacctacctcacacacacc
tgctccattgtccactgtatacagctcctcatccacgcagtcgctgttggtcctggtgac
cagcttctgaggccggagcggaaaacagagcagtcagaagaccagttggacgctgcagat
aaacaacttgaatggcggtgttgtgagatcatggccgagctggttgaagggctgcaaagt
gtgctggctctgggtcaccacagaaacaagaacattccagcgttccttacacctacccta
cggaatgtcatcatcagcctggccaggctgcccattgtgaacagctacacccgaatccca
ccactggtctggaagctgggctggtcccccaggccgagtggagaatttggcacagcattg
ccagagatccctgtagagttcctgcaggagaaagacgtcttcagagagttcctctaccgc
attaacactctgggctggagcagtcggacacagtttgaggagacgtgggccactctgttg
ggagtgctggtcactcagccaatcacgatggaccaagaagaggaaacccagcaagaggag
gatatggagaggactcagatcaatgtactggcggttcaggccatcacctctctggtgctg
agtgccatgactttgccaacagcaggaaacccagcagtcagctgccctgaacagcaagcc
cgcaacaaaagcctcaaagctctggacaccaggtttggtcgcaagctgagtgtgattaga
ggtatggttgagcgtgagattcaggccatggtgtcaaagagagacaacatcgccacacac
ttcccctatcatgcctgggaccccgtgccatccttatcatcctcaacggcaggcaccctc
atcagccatgagaaactcctgctgcagattaacacagagagggagatgggcaacatggac
tacaaactgggtcaagtgtcaattcactccgtgtggttgggaaataacatcacccctctg
agggaggaggagtggggtgaggatgaggaagatgaagcagatgctccagcacctgcctca
ccgccattatcgccaatcaactccaggaagcatcgtgctggggttgacatccaatcctgc
tctcagttccttctagagctctacagtcagtggatcctccctggcagccccagtagcaag
aagactcctgttgtgctcctcagtgaggtggtcagatcgctgctggcagtgtctgatctc
ttcactgagaggaatcagtttgatatgatgttctccactttgactgagctgcagaaggtc
catccaccagaagatgagattctcaaccagtacctcgtgccagctatctgcaaagcagcg
gcagtgcttggcatggataaagccatcgcagagcctgtgtgccgtctgttggagagcacc
ttgcgcagcactcatttgcccagtcgaattggcgctcttcacggagttctgtacgtgctg
gagtgtgacctactggacgatacggcacgccagcttatacctaccatcaatgaatacctg
ctgtctaaccttagagctatagcacaatgtgtgaatctacacaaccaacagcatgtgttg
gtgatgtgcgcggtggcattctacatgatggagaactaccccctggatgtagggcccgag
ttcaatgccgggatcattcagctgtgctatatgatgctgtctgctagtgaggaggccaca
ccatccatcatctaccactgcattctgcgaggtctggagcggttgcttctgtctgagcag
ttgtcacgtgtggacacagagacgctagtcaagctgagcgttgagcgtgtgaacatgccc
agcccacaccgtgccatggctgccctgagtctcatgctcacctgcatgtacacaggtgtg
gctggagaggaagggaaggagaagggaagtcctgggcgccctgttgatacagaccccaca
gctcctgacagcgaatcggtcattgtcgcaatggagcgtgtatccgtcctgtttgacagg
attcgcaaaggctttccgagtgaggcgcgtatggtatcccggatccttcctcagttcctg
gatgactttttcccactgcaggatgtcatgaacaaagtcattggggagttcctgtccaat
cagcagccttacccacaattcatggctacagtggtatacaaggtatttcagacacttcat
gcaactgggcagtcctccatggtgcgtgactgggtgttactctcgctgtcaaacttcaca
cagaggacgcctgtcgccatggcaatgtggagcttgtcttgtttctttgtcagtgcctcg
accagtcagtggatctctgccctcctgcctcatgtcatcagtcggatggggaagtccgac
acagtggacattagtctcttttgtctggtagctatggatttttaccgacaccagatcgat
gaagagttagaccgcagggccttccagacggtctttgagatggtggcttcacctggtagt
ccatattaccaattactgtgctgtttgcagagcattcaccaagacatgtcactataa
DBGET
integrated database retrieval system
