Sinocyclocheilus anshuiensis: 107674364
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Entry
107674364 CDS
T04917
Name
(RefSeq) histone deacetylase 6-like isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
sanh
Sinocyclocheilus anshuiensis
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sanh01009
]
107674364
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107674364
04131 Membrane trafficking [BR:
sanh04131
]
107674364
03036 Chromosome and associated proteins [BR:
sanh03036
]
107674364
Enzymes [BR:
sanh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107674364
Protein phosphatases and associated proteins [BR:
sanh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107674364
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107674364
Membrane trafficking [BR:
sanh04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107674364
Chromosome and associated proteins [BR:
sanh03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
107674364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
107674364
NCBI-ProteinID:
XP_016323804
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MDPVPDSKGSTRSPRGTSETKRENNNPNQKKNLQEARRKGRMDRSKEEEEMSSELKNLDV
RGKTKATGTGLVYVDAFTRFHCLWDASHPECPARVSAVMEMLETEGLLGRCVQVEARAVS
EDELLLIHTKAYVELMKSTQKMTEEELKTLAHKYDSVYLHPEFFASACLAVGSVLQLVDK
VMTSQLRNGFSINRPPGHHAHAEKMNGYCMFNNLAIAARYAQKQHGVKRVLIVDWDVHHG
QGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINLPWNKIGMEDG
DYVTAFQQLLLPVAYEFQPQLVLVAAGFDSVIGDPKGEMRVSPQCFSILTHMLKGVAQGR
LVLALEGGYNLQSTAEGVCASVRSLLGDPCPHLTSPGTPSESALKSISESISALYPFWKS
LQTFEGGPLSDVTPLPAPVCAEVKVSSPITGLVYDQRMMLHHNMWDGHHPELPQRISRIF
CQHEELGLLSRCLQIPARLATEEELALCHSSEHISTIKSTEHMKPRDLHRLGNDYNSIYI
CNESYTCALMAAGSCFNSVQAIITGHVRNGVAIVRPPGHHAEKDTACGFCFFNTAALTAR
YAQSITHESLRVLILDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGTFFPSSEDANYDKV
GQGNGTGYNVNIPWNGGKMGDPEYMAAFHHIVMPIAREFAPELVLVSAGFDAARGDPLGG
YQVTPEGYAHLTHQLMCLAAGRVLVILEGGYNLTSISESMSMCTSMLLGDSPPSLDHLPP
PKTSATVTINNVLRAHAPFWSSLRIQIPESLRLALPSPKSKGKRASAGKSKKSPRQSTQS
PGQTPQHLEESGLDELSKDLLSLNLNTSTSSNPSPASVPIGGARRKVKPNPQRDSAGRES
DSPLKRTSEKARVGDGTHAEITAVKAETPDRTIPESVVSGKSAAVDDQESSVLEAAGGHT
TMMSVLESVFGAQATDLDTMYVVDPLSWCPHLESVRPVPAGGIDVFLPCEECGGDTENWI
CLFCYKVLCGRYVKQHMVTHGQVSGHPMVLSFADLSVWCYACESYVHNKVLHEAKSAAHL
VKFGEEIPPFS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgttccagattccaaaggttctactcgatcaccgagaggaacatctgaaacc
aaaagagaaaacaacaatccgaaccagaagaagaatctacaggaggcgcggaggaagggc
agaatggatcggagcaaagaggaggaggagatgagcagtgaactcaaaaacctggatgtt
cgtggtaagactaaagcaacaggaacaggtctcgtctacgtagatgcctttactcgcttt
cactgcctctgggatgccagtcacccggagtgtccagcaagagtgagcgctgtgatggag
atgctggagacggaaggtctgctgggacgctgcgttcaagtagaggccagagctgtgtca
gaagatgagctgttactcattcatacgaaggcgtatgtagagctgatgaaatccacacag
aaaatgacagaggaggagctgaaaactttggctcataaatatgattctgtctacctgcat
cctgaatttttcgcctccgcctgtctggcggtgggatcagttctccagctggtggataaa
gtgatgacatcacagctgcgtaatggcttctccatcaacaggcctcctggtcaccacgct
catgcagagaagatgaatggctactgtatgtttaataatctggccatagcagcacgctac
gcacagaagcagcatggagttaaacgagttctgattgtggattgggatgtgcatcacgga
cagggaatccagtatatttttgaagaggatcccagtgtgctgtatttctccgtgcacaga
tatgaagatggctcgttctggccgcatctcaaggagtctgacagcagttcggtgggttca
ggagcaggacagggctacaatatcaacctgccctggaacaagatagggatggaggatgga
gattacgtcacagctttccagcagctcctgcttccagtggcgtatgagtttcagcctcag
ctggtgttagtggcggccggctttgactctgtgattggtgacccaaagggtgagatgcga
gtgagtccacagtgtttctccatcctgacccacatgctgaaaggtgtagcacagggtcga
ctcgtgctggctcttgagggtggatataacctccagtccacagcagagggtgtttgtgct
agtgtgaggtcactgctgggtgacccttgccctcatctgacctctcctggcactccgagt
gaaagtgctctgaagtccatctcagagtccatctcagccttgtatccattttggaagagt
cttcagacttttgagggtggtcctctgtcggatgtcactcccctgcccgctccagtgtgt
gcagaagtgaaggtttcctctccgatcactgggctggtttacgaccagagaatgatgctt
catcacaacatgtgggatggtcatcatccagagctccctcagagaatttctcgcatcttt
tgccagcatgaggagttgggtctgctgtcccgttgccttcagataccagctcgcctagca
acagaagaagagctggcactctgtcacagttctgagcatataagcactataaagagtaca
gagcacatgaaacccagagatctgcaccgtctgggaaacgattacaactccatctacatc
tgtaatgagagctacacctgtgccctgatggccgctgggtcgtgttttaactctgtacag
gccataatcacaggccacgtgagaaatggcgtggccatagtccgtcctcctggtcatcat
gcagagaaagacacagcttgtggtttctgtttctttaatacggctgctttgaccgcacgc
tatgcccagagcatcactcacgaatccctgcgtgtcctcatcctggattgggatgttcac
catggaaacggcacacagcacatctttgaggaggatgacagtgttctgtacatctccctg
catcgctacgaagacgggacattcttccccagttcagaggatgctaactatgataaggtg
gggcaggggaacggcacaggatacaatgtcaacatcccctggaatggaggaaagatggga
gacccagaatacatggcggctttccatcacatagtgatgccgatagccagagagtttgcc
ccagagctggtgctggtgtctgctgggtttgatgcagcacgaggtgatccgttaggaggg
tatcaggtgaccccagagggctacgctcacctcacccatcagttaatgtgcctggctgca
ggaagagtgctagtcatactggagggaggatataacctcacctccatctctgagtcaatg
tccatgtgcaccagtatgttgctgggagactctcctccgtctctagaccatctgccccct
ccgaagaccagcgccactgttaccattaacaatgtcttgcgtgcacacgcccccttttgg
agctccttgagaatacagattccagagtcacttcgtttggctttgccgtctcctaaatcg
aaaggcaagcgggcatcagcgggcaagagcaagaaatctcctcgccagtccacccagagt
cctggacagacaccacagcatcttgaggaatccggccttgatgagctcagtaaggacctg
ctctctctgaatctcaacacaagtacctcatctaaccccagcccagcatctgtccccatt
ggaggagccagacggaaggtgaaacccaacccacagagggattcagcaggccgggagtca
gattcacccctaaaacgcacgtcagagaaagccagagttggagatggcacgcatgcagag
attacagctgtaaaagcagagacacctgaccggacaatcccagagtctgtggtctctgga
aagtcagctgccgtggatgatcaggagagttcagtgctggaagctgctggtggtcacacc
actatgatgtcagtcttagaaagtgtctttggagcacaagccacggatttggacaccatg
tatgtggtggacccgttgtcatggtgcccacacttggagtcagtgcgaccggtgcccgca
ggtggcatcgatgtcttcctgccgtgtgaagagtgtggaggtgataccgaaaactggatc
tgcctcttctgctacaaggtgctctgcgggcgttatgtgaagcagcacatggtgacccac
gggcaggtgtcgggtcaccctatggtgctgagcttcgctgacctttctgtctggtgctac
gcttgtgagtcatacgtccacaacaaggtgctccatgaagccaaaagtgccgctcacctt
gtgaagtttggagaggagattcctcctttcagctaa
DBGET
integrated database retrieval system
