Sinocyclocheilus anshuiensis: 107674561
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Entry
107674561 CDS
T04917
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04510
Focal adhesion
sanh04512
ECM-receptor interaction
sanh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107674561
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107674561
09142 Cell motility
04820 Cytoskeleton in muscle cells
107674561
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sanh00535
]
107674561
Proteoglycans [BR:
sanh00535
]
Extracellular matrix (ECM) proteoglycans
Others
107674561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
107674561
NCBI-ProteinID:
XP_016324056
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MAHAGTLRASLLLISLQLVLIISAQRGPVGPRGPPGPPGPAGFHGVDGIDGDRGPGPGPD
GPPGPDGDNGKDGLNGLPGKPGADGLTGPRGDPGPVGPPGQKGEPGEPGSRGALGVGEDG
EAGADGEDGLPGELGKVGPPGSRGPRGPVGAPGLAGPRGPPGVWDGKELCANACTSGLNG
YTGLPGMKGHKGVKGESGEPGRQGHKGEEGDQGAPGEPGAQGTPGPQGLRGITGMMGPKG
DRGARGNVGDLGPQGIQGAPGDRGQRGTVGETGPKGAQGPRGLQGLMGLSGPKGETGLPG
VDARDGIPGLPGVKGLPGKVGSPGEAGLQGFPGLPGIPGAKGHMGAKGNTGDPGVAGLIG
NNGKTGERGEQGEVGTVGPRGGPGERGVRGPYGSAGLPGARGAKGDPGLPGLPGPAGFIG
QKGDRGAVGLTGPKGEQGPPGEEGTPGDKGDVGDEGEPGEKGSTGKPGEPGNKGPEGGRG
QHGPEGPAGGPGPRGMQGDRGVPGLPGAQGRTGRTPTDEHIKQVCMRVLHGQLAQLAASL
TRPESGITGLPGPPGPPGLPGPAGDNGFTGHPGSRGLPGLKGPPGLMGRKGHKGDEGDRG
DRGPTVVGSKGIPGPPGLPGEPGKPAYGSNGRDGLRGPPGVPGMPGVPGPPGPSGPNGYC
ESSQCILQAVAGPMSVKESNMKGPDGL
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgccgggaccctccgcgcgtccctgctgctgatttcactgcagttagtcctg
atcatctctgcgcagagggggccagttggtccaagagggccacctggacctccagggcct
gctgggtttcatggcgttgacggcattgatggtgataggggacctggccctggcccagat
ggccccccaggccctgatggggacaatggcaaggatggattaaatggccttccaggaaaa
ccaggagcggatggtttgactgggccccgtggtgaccctggccctgttggccctcctgga
cagaaaggtgaacctggtgagccgggatcaaggggagcccttggtgttggagaggatggt
gaagctggtgctgatggggaagatggattacctggagagctgggcaaagttggacctcct
ggaagccgtggaccgagaggtcctgttggtgcgccaggattggcagggcccagaggccct
cctggagtctgggatggtaaggagctgtgtgcaaatgcctgtacttctggcctgaatggc
tacacaggtcttccaggcatgaagggccacaaaggtgtcaaaggtgaatcaggtgaacca
ggaagacaaggacataagggtgaagaaggagaccagggagcacctggagagccaggtgca
caaggaactcctggtccacagggtctcagaggaatcacagggatgatgggccctaaaggg
gaccggggagctcgtgggaatgttggcgacctgggccctcagggtattcagggtgctcct
ggtgatcggggtcagagaggaacagtaggcgagactggaccaaaaggagctcagggacct
cgggggttgcagggacttatgggtttatctggaccaaaaggagagactgggttgcctggg
gtggatgctcgtgacggtattccaggactgcctggagtgaagggtcttcctgggaaagtt
ggctctcctggtgaggctggacttcagggatttccaggtttgccaggcattccaggagct
aaaggccacatgggtgcaaaaggaaatactggtgatccaggtgtggcaggtctgattgga
aataatggaaaaacaggtgaacgtggcgagcagggagaggtgggcacagtcggaccaaga
ggtgggccaggtgagagaggagtgagaggtccttatgggtctgcaggcttgccaggtgca
aggggagctaaaggagatccgggccttcctggtcttccagggcctgctggcttcattggg
caaaaaggcgacaggggcgctgttggtctcactggtccaaaaggagagcaaggaccacct
ggagaagagggaacacctggagataaaggagatgttggtgatgagggagagccaggcgag
aaaggatcgacaggaaaaccaggagagccaggaaataaagggccagagggtgggcgtggc
caacatggaccagagggcccagcaggggggcctggcccaagaggcatgcaaggagacagg
ggggtacctggactgcctggggcacagggacggacaggccgaacaccaacagatgaacac
atcaagcaggtctgcatgagggttttgcatggacagcttgcccagttggcagccagtctg
acaaggccagagtcgggcatcactgggttgccaggccctcctggtccccctggccttcca
gggcccgctggagacaatggcttcactgggcatcctggaagcagaggactaccaggtctc
aaaggccccccagggctcatggggaggaaagggcacaaaggtgatgaaggggacagggga
gatagagggcccacagtggtggggtctaaaggtatacctggaccaccagggctcccaggt
gagcctgggaaaccagcatatggcagtaacgggcgtgacggtctgagaggaccaccaggt
gttcctggaatgccaggtgtgcccgggccacctggtccctctgggccaaacggatactgc
gagtcatctcagtgcatacttcaagcagttgcaggtccgatgtccgtcaaagagtctaac
atgaagggaccagatggtctatga
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