KEGG   Sinocyclocheilus anshuiensis: 107674561
Entry
107674561         CDS       T04917                                 
Name
(RefSeq) collagen alpha-1(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh04510  Focal adhesion
sanh04512  ECM-receptor interaction
sanh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107674561
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107674561
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107674561
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:sanh00535]
    107674561
Proteoglycans [BR:sanh00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   107674561
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 107674561
NCBI-ProteinID: XP_016324056
LinkDB
Position
Unknown
AA seq 687 aa
MAHAGTLRASLLLISLQLVLIISAQRGPVGPRGPPGPPGPAGFHGVDGIDGDRGPGPGPD
GPPGPDGDNGKDGLNGLPGKPGADGLTGPRGDPGPVGPPGQKGEPGEPGSRGALGVGEDG
EAGADGEDGLPGELGKVGPPGSRGPRGPVGAPGLAGPRGPPGVWDGKELCANACTSGLNG
YTGLPGMKGHKGVKGESGEPGRQGHKGEEGDQGAPGEPGAQGTPGPQGLRGITGMMGPKG
DRGARGNVGDLGPQGIQGAPGDRGQRGTVGETGPKGAQGPRGLQGLMGLSGPKGETGLPG
VDARDGIPGLPGVKGLPGKVGSPGEAGLQGFPGLPGIPGAKGHMGAKGNTGDPGVAGLIG
NNGKTGERGEQGEVGTVGPRGGPGERGVRGPYGSAGLPGARGAKGDPGLPGLPGPAGFIG
QKGDRGAVGLTGPKGEQGPPGEEGTPGDKGDVGDEGEPGEKGSTGKPGEPGNKGPEGGRG
QHGPEGPAGGPGPRGMQGDRGVPGLPGAQGRTGRTPTDEHIKQVCMRVLHGQLAQLAASL
TRPESGITGLPGPPGPPGLPGPAGDNGFTGHPGSRGLPGLKGPPGLMGRKGHKGDEGDRG
DRGPTVVGSKGIPGPPGLPGEPGKPAYGSNGRDGLRGPPGVPGMPGVPGPPGPSGPNGYC
ESSQCILQAVAGPMSVKESNMKGPDGL
NT seq 2064 nt   +upstreamnt  +downstreamnt
atggcgcacgccgggaccctccgcgcgtccctgctgctgatttcactgcagttagtcctg
atcatctctgcgcagagggggccagttggtccaagagggccacctggacctccagggcct
gctgggtttcatggcgttgacggcattgatggtgataggggacctggccctggcccagat
ggccccccaggccctgatggggacaatggcaaggatggattaaatggccttccaggaaaa
ccaggagcggatggtttgactgggccccgtggtgaccctggccctgttggccctcctgga
cagaaaggtgaacctggtgagccgggatcaaggggagcccttggtgttggagaggatggt
gaagctggtgctgatggggaagatggattacctggagagctgggcaaagttggacctcct
ggaagccgtggaccgagaggtcctgttggtgcgccaggattggcagggcccagaggccct
cctggagtctgggatggtaaggagctgtgtgcaaatgcctgtacttctggcctgaatggc
tacacaggtcttccaggcatgaagggccacaaaggtgtcaaaggtgaatcaggtgaacca
ggaagacaaggacataagggtgaagaaggagaccagggagcacctggagagccaggtgca
caaggaactcctggtccacagggtctcagaggaatcacagggatgatgggccctaaaggg
gaccggggagctcgtgggaatgttggcgacctgggccctcagggtattcagggtgctcct
ggtgatcggggtcagagaggaacagtaggcgagactggaccaaaaggagctcagggacct
cgggggttgcagggacttatgggtttatctggaccaaaaggagagactgggttgcctggg
gtggatgctcgtgacggtattccaggactgcctggagtgaagggtcttcctgggaaagtt
ggctctcctggtgaggctggacttcagggatttccaggtttgccaggcattccaggagct
aaaggccacatgggtgcaaaaggaaatactggtgatccaggtgtggcaggtctgattgga
aataatggaaaaacaggtgaacgtggcgagcagggagaggtgggcacagtcggaccaaga
ggtgggccaggtgagagaggagtgagaggtccttatgggtctgcaggcttgccaggtgca
aggggagctaaaggagatccgggccttcctggtcttccagggcctgctggcttcattggg
caaaaaggcgacaggggcgctgttggtctcactggtccaaaaggagagcaaggaccacct
ggagaagagggaacacctggagataaaggagatgttggtgatgagggagagccaggcgag
aaaggatcgacaggaaaaccaggagagccaggaaataaagggccagagggtgggcgtggc
caacatggaccagagggcccagcaggggggcctggcccaagaggcatgcaaggagacagg
ggggtacctggactgcctggggcacagggacggacaggccgaacaccaacagatgaacac
atcaagcaggtctgcatgagggttttgcatggacagcttgcccagttggcagccagtctg
acaaggccagagtcgggcatcactgggttgccaggccctcctggtccccctggccttcca
gggcccgctggagacaatggcttcactgggcatcctggaagcagaggactaccaggtctc
aaaggccccccagggctcatggggaggaaagggcacaaaggtgatgaaggggacagggga
gatagagggcccacagtggtggggtctaaaggtatacctggaccaccagggctcccaggt
gagcctgggaaaccagcatatggcagtaacgggcgtgacggtctgagaggaccaccaggt
gttcctggaatgccaggtgtgcccgggccacctggtccctctgggccaaacggatactgc
gagtcatctcagtgcatacttcaagcagttgcaggtccgatgtccgtcaaagagtctaac
atgaagggaccagatggtctatga

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