KEGG   Sinocyclocheilus anshuiensis: 107674613
Entry
107674613         CDS       T04917                                 
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107674613
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sanh03021]
    107674613
   03019 Messenger RNA biogenesis [BR:sanh03019]
    107674613
Transcription machinery [BR:sanh03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     107674613
Messenger RNA biogenesis [BR:sanh03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     107674613
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_3 zf-CCCH_12 zf-CCCH_2 zf-CCHC zf-CCCH_4 zf-CCCH_RBM22 zf-CCCH_DUS3L Nab2-like_zf-CCCH_ zf-C3H1
Other DBs
NCBI-GeneID: 107674613
NCBI-ProteinID: XP_016324125
UniProt: A0A671RW67
LinkDB
Position
Unknown
AA seq 268 aa
MQELIATVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFMRAACVKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGATEQLS
LPQQAQSQQKQQNTQPTNRSSQSLIQLTNTNVHNNQRMPNAVGILHSNSMGGPRGPRPLD
QVTCYKCGEKGHYANKCSKGHLAFLSGQ
NT seq 807 nt   +upstreamnt  +downstreamnt
atgcaggaattaatcgcgactgtcgatcatatcaagtttgatctagaaattgctgtagaa
caacagttaggcgctcaaccattgccatttccaggaatggataaatctggcgcagctgtg
tgcgagttcttcatgagagctgcctgtgtgaaaggtggaatgtgtcctttcagacacatc
agtggagaaaagactgtggtgtgcaagcactggcttaggggtttatgcaagaaaggagac
caatgtgaatttttacatgagtatgacatgacaaagatgcctgaatgttatttctactct
aaatttggggagtgcagtaataaagagtgtccatttttgcacattgacccagaatctaag
attaaagattgcccatggtatgataggggcttttgtaagcatggtccggattgcaggcac
agacacacaagaagagtcatctgtgtaaattaccttgttggcttctgtccggagggcaag
tcttgcaaatttatgcacccaagatttgaactccctatgggtgcaactgaacagctatca
ttaccacaacaggcacagtctcagcaaaagcagcaaaacacgcagcccacaaacaggtca
tcacaatcactcatccagttaaccaacaccaatgtccacaacaaccagagaatgccaaat
gctgttgggatattgcactctaacagcatgggtggacctcgcggtcctcgtccactggat
caagttacgtgttacaagtgtggtgagaagggccattatgcaaacaaatgttcaaaagga
cacctggcgtttttgagtggacagtaa

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