Sinocyclocheilus anshuiensis: 107675315
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Entry
107675315 CDS
T04917
Name
(RefSeq) protein SCAF8-like isoform X1
KO
K13191
RNA-binding protein 16
Organism
sanh
Sinocyclocheilus anshuiensis
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sanh03021
]
107675315
03041 Spliceosome [BR:
sanh03041
]
107675315
Transcription machinery [BR:
sanh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107675315
Spliceosome [BR:
sanh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107675315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
RRM_occluded
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
107675315
NCBI-ProteinID:
XP_016325102
LinkDB
All DBs
Position
Unknown
AA seq
1293 aa
AA seq
DB search
MEAVKAFNGELYSLNEYKPPISKAKMTQITKLAIKTIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSKNIITTFQNLYRCPADDKSKIVRVLNLWQKN
SVFKSDIIQPLLDMAAGLPPPSVTPVSASSAVPVNSTTPGTPATPATPANIVQSLPDWAS
QISNTDTVAAVAQILQSPQGQQLQQLVQSLQMQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAAAANTLNPLEQRVSSFNKKLLGQFDFRNESEHSEDSKKDATPSQLPVVPESINSSIF
HQLAEHLQQQNLEQFQKQLMEHQHHQQKSMTMEGQDAIFGLENSAPPGQSSAPPQLPEQE
AKMDDSIDNQQQDMDIDEGQDTVDEELFEAEEKKTSSTRSRTRSRSRSRSPKRRRSRSRS
GSRKRKHRKRSRSRSRDRKRKSSRSYSSERRAREREKERQKKGLPPIRSRVLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYRALQKLSTGSYKIG
SKVIKIAWALNKGVKQEYKQFWDVDLGVTYIPWEKVKLDDLDDFAEGGMIDQETVNNEWE
SQRNTETAKETQNQAVTAETSTASSTPSEAFTQPVTMMPMQIPVAQTVPAVGLVPPSFPV
TIAMPPPGFGPPPPFLRAGFNASQPPPGFVATPGVGPSALGTRLASAQTSLVQPSLPTIQ
ESSKDSLFGAMIPPTSTIPGSFIPSAMPGAGVFNPVGAQHQQSSADKMPQSAEMMETASE
ITLQGMQNAVRSGMGLLGLHPSASLTHPLSGQRMAGLLPLELRPNLLQGPGGRFPLLMQP
GLAHQTNNVLDASLQAQARVRVPFSQMEQFNRAEGTFARAPNPSSAGADSLAKADNETPP
RSDVGAQQEGDQDYRFPPPEKQSTGLLKTPPLEMRTEPVPARPPLLERPPRTVMQAEGRR
ENMSGGFRAESRWGPPRGDFDERDMRGMSAGPPKGFQEERSNPNFQNRFEGRSGSSSGPA
WNRGTGPSFNANMHQDYNDCRRPWERQKDRDDRDMDFRGEMNGNRQRERERDRNRDRERG
RERNRERDREWERERDRERENEKDKERERKCWTPLSSQSQPQPLLPKSQPLLPLPTPLVA
QPEVQEQVQINSPSLPVPQHQRHPEPQPTEREAEPQPELMPELQSQPKSLSSAEEMASSQ
EQEETSRINGMETGSKAQLNILEPASQTATEPSRSPSPSLTSTPTWFQNEPLKREKTPEM
SVSSSVDADTEQTGPKVNAETEPELEKTDTEET
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaggcgtttaacggcgagctgtactcactgaatgaatacaagccaccg
atctccaaagcaaagatgacccagattacaaaattggcaattaaaactataaagttctac
aagcatgtcgtccaaagtgtggagaaattcattcagaagtgcaagcctgagtacaaagtc
cctggtctgtatgtcatcgactccattgtacggcagtctcgtcaccagtttgggcaagag
aaagatgttttcgctccacgctttagtaagaacatcattacaactttccaaaacctctac
cgctgcccagctgatgacaagagtaagattgtccgagtactaaatctatggcagaaaaac
agtgtctttaagagtgacatcatccaacctctactggatatggcagcagggctcccaccc
cccagcgttacacccgtgtctgccagcagtgccgtacccgtcaacagcactactcctgga
actccggcaactccagccaccccagccaacatagtgcagagtctcccagactgggcgtct
cagatctccaacacggacacagtggctgcggtcgcccagatcttacagagtccccaaggc
cagcagttgcagcagctggttcagagcttgcagatgcagcagcagaaacctcagccctct
ctgctgcaggcgctggatgcaggattggtggtgcagctgcaggccctgactgcacagctc
actgcagccgcagcagccaacacgctcaacccgctggaacagagagtttcctcctttaac
aagaagctgttgggtcagttcgattttaggaatgagtcggagcacagtgaggattctaag
aaagatgctacaccatctcagttacctgtggtgccagagtccatcaatagctcaatattt
catcagctggccgagcatcttcagcagcaaaacctagagcagtttcagaaacagctaatg
gagcaccagcatcatcaacagaagtctatgaccatggagggccaggatgccatctttggt
cttgaaaattctgcccctcctggccagagcagcgccccaccacagctcccagaacaagaa
gcaaaaatggatgactccattgataaccagcaacaggacatggatattgatgagggacag
gatactgtagatgaggagctctttgaggctgaggagaagaaaaccagcagtacccgttca
aggacacgctcgagatctcggtccaggtcacctaagagaaggaggtcaaggtctcgctca
gggtctcggaagcgcaaacacaggaagcgatcacggtctcgctcaagggacagaaagaga
aagtcctcacgttcttattccagtgagagacgagcgcgggaaagagaaaaggagcggcag
aaaaaagggcttcctccaatccgctcaagggttctaagtgtttgcagcactactctatgg
gtcggccaagtggacaagaaggccacccaacaagatcttactaacctcttcgaagagttt
ggccagattgaatccatcaatatgattcctcccagaggctgtgcttacatctgtatggtt
catcgtcaggatgcataccgcgcccttcagaaactgagcactggctcctacaaaattggt
tcaaaggtcatcaaaattgcttgggccctcaataaaggggtgaaacaggagtataagcag
ttctgggatgtggaccttggggtgacttatatcccatgggagaaggtcaaactggatgac
ctggatgactttgcagagggaggcatgattgaccaagagactgtcaacaatgaatgggaa
tcccagagaaatactgagactgccaaagagactcagaatcaggctgttacagctgaaacc
agtacagcaagcagcacaccaagtgaggcctttacccagcctgtcactatgatgcccatg
cagattccagtggcacagaccgtccctgctgttggcctcgtgcctccatccttccctgtc
actatagcaatgcccccaccaggctttggtcccccaccaccatttctaagggcagggttc
aatgcctcacagcctcctccaggtttcgtggctacgccaggagtaggaccatcagcgctt
ggaaccaggcttgcttcagctcagacctctctagtgcagccttcgctgccaaccattcaa
gagagcagcaaggattctctgtttggagccatgattcctcccaccagtactattcctggg
agttttattccatcagcaatgcccggggcaggagtctttaaccctgtgggagcacagcat
cagcagagcagcgctgacaaaatgcctcagtcggctgaaatgatggagacagcttctgag
ataacactacagggcatgcaaaatgcagtgcgcagtggaatgggtctgctaggtttgcac
ccttctgcatctctaacacatcctctctctggccagaggatggcagggctgcttcccctg
gaactgcgacccaacctgctccagggacctgggggccgcttccccctgctcatgcagcca
ggccttgcacatcagaccaacaatgtcctggatgcttcacttcaagcccaagcccgtgtt
cgggttccattctctcaaatggagcagttcaaccgtgctgaaggcactttcgcaagggca
cctaacccctcatctgctggagctgacagtctggccaaggccgataatgagacaccaccc
aggtcagatgtaggtgcccagcaagaaggagatcaggactatcgctttccaccgccagag
aagcagagcacagggttgttgaagacccctcctttggagatgcgtactgaacctgtgcct
gccagaccacctttactagaacgacctccaagaacagtcatgcaagctgaaggtcgaaga
gaaaatatgtcaggaggtttcagggcagaaagtcgctggggaccacccaggggtgacttc
gatgagcgagacatgagggggatgtctgctggacctccaaagggttttcaggaggaacgt
tccaaccctaactttcagaatcgttttgagggccgcagcggaagttcatcaggacctgct
tggaatcgtggaactgggccttcttttaacgcaaacatgcaccaggactacaatgattgt
cgcagaccttgggaaaggcagaaggaccgagatgacagggacatggacttccggggcgaa
atgaatggcaatcgtcaacgtgaaagggagagggacaggaatcgggaccgtgaacgcggc
agagagcggaatcgtgagagagaccgagaatgggagcgtgaaagggacagagagagggag
aacgagaaggataaagagcgggaacggaaatgctggactcccctttcttcacaatctcag
cctcaaccgctgcttcccaagtctcaaccgctgctccctctgccgacccccttggttgct
cagcctgaagtacaagaacaagtgcaaattaactcaccatctctaccggtgccccaacac
cagcgtcatccggaaccacagccaacagaacgagaagctgaaccacaaccagagttaatg
ccagagctacagtcgcagcccaagtcactcagctccgctgaagagatggcaagtagtcaa
gagcaggaggaaacctcacgaatcaatggaatggagaccggatcaaaagctcaattaaac
attttggaacctgcatcccagaccgctacagagccctctcgtagcccctctccatccctt
acctccacacccacctggttccagaatgagcccttgaaaagagagaagaccccagaaatg
tctgtttcctcatctgtggatgcagacactgaacagactgggccaaaggtgaacgctgag
actgaacctgagctagagaaaacagacactgaggaaacataa
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