KEGG   Sinocyclocheilus anshuiensis: 107675563
Entry
107675563         CDS       T04917                                 
Name
(RefSeq) LOW QUALITY PROTEIN: CDK-activating kinase assembly factor MAT1-like
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03022  Basal transcription factors
sanh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107675563
  09124 Replication and repair
   03420 Nucleotide excision repair
    107675563
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sanh03021]
    107675563
   03400 DNA repair and recombination proteins [BR:sanh03400]
    107675563
Transcription machinery [BR:sanh03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     107675563
DNA repair and recombination proteins [BR:sanh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     107675563
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 TRAF3_RING zf-RING_5 zf-UDP zf-C3HC4 zf-RING_UBOX zf-RING_2 TRAF6_Z2 zf-P11 RING_XB3-XBAT31
Other DBs
NCBI-GeneID: 107675563
NCBI-ProteinID: XP_016325456
LinkDB
Position
Unknown
AA seq 309 aa
MDDQGCPTCKTTKYRNLSLKLMVNVCGHTLCESCVEMLFVRGSGNCVQCNTPLRKSNFRV
QLFEDPAIDKEVEIRKKVLKIYNKREFDFSTLKEYNDYLEQVEDIVFNQTNNIDVERIKQ
MMEQYQRDNKDIIQRNKAKLTREQEELEELLLQEQXDSEXRRLETLQEEQRHLQAKRINK
QALLDELEISKLPAAVLLAQHKDRASQLETQIEKQKQNVKPANIFSTGIMMGQTVSLASV
SRVEEVLYVYQPLCIDTYGLPVPELDQLGRLGYLNHVRTASPQDQAGGYTSGLACHRAIQ
DAFSGLFPS
NT seq 930 nt   +upstreamnt  +downstreamnt
atggatgatcagggatgcccgacgtgcaagacgaccaaatacagaaatctatctctgaag
ctgatggtgaatgtgtgtggacacacgctgtgtgagagctgtgtggagatgctgtttgtc
cgtggttcaggtaactgtgtgcagtgcaacactcctctcagaaagagtaatttccgcgtg
cagctctttgaagatccagccatcgataaagaggtggagatccgcaagaaggttcttaaa
atctataataagagggaattcgatttttccactctaaaagaatataatgactacctggag
caggtggaggacattgtgtttaaccagacaaataacatagatgttgaaaggatcaagcag
atgatggaacagtaccaacgagataacaaagacattatacagagaaacaaagccaaactg
acacgtgagcaggaggagttggaggagctgttgttgcaggagcagtaggattcagagtag
aggagactggagacccttcaggaggaacagagacatctacaggctaagaggataaacaaa
caggccctgctggatgaactggaaatttccaagttacctgcggctgtgctgttggcccaa
cataaagatcgagcctctcaactggagacccagatagaaaaacagaagcaaaatgtcaag
ccagcaaacatcttctctactggaataatgatgggtcagactgtgtctttggcttctgtg
tctcgtgtggaggaggtgttgtacgtctatcagcctctgtgcattgacacgtacgggctg
cccgttccagaactggatcagttgggccgattagggtatttgaatcatgtgcgcacagcg
tctccgcaggatcaggctggtggttatacatcaggactggcatgccatcgtgccatccag
gatgctttcagtggcctcttcccctcatga

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