Sinocyclocheilus anshuiensis: 107675566
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Entry
107675566 CDS
T04917
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04137
Mitophagy - animal
sanh04140
Autophagy - animal
sanh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107675566
04137 Mitophagy - animal
107675566
04148 Efferocytosis
107675566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sanh03000
]
107675566
Transcription factors [BR:
sanh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107675566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
107675566
NCBI-ProteinID:
XP_016325460
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MDYICVCVHYRVSSERRKEKSRDAARCRRGKESEVFYELARELPLPHSVTSNLDKASVMR
LALSYLRLRKLLNTDILDVESELDSQWNSSYLKALDGFLMVLSADGDIVYLSESISKCLG
LPQIDLTGYSVFEYTHPCDHEELREMLAHRTGLSKKAKEQHTNRSFLLRMKCTLTSRGRT
VNVKSASWKVLRCSGHIHTTDGIKKGVCEEKNVCSAYLVLICESIPHPANIEAPLDSRTF
LSRHTLDMRFTYCDERITELLGFDPVDLLHHSVYEYYHALDSDHMTKAHHNLFVKGQVCT
GQYRLLAKAGGFAWAETQATVIYNSKNSQPQCVVCVNYILSGIEQPKQIMSLQQTNSTKL
KQEQEEHHEESLGTEVTVAELKEEAKAKDEKKEECVREELHDSLKGKPEALTVVDPVLTL
DITSTDSAISVLTEIPLYNDVMLPSSSALLPLSPLSPPYSSLNDDDASTAHLQPDYFPFP
QSLTPDSSRSQVDLLVDSELSDQLKPDHVERLFSMDIEAKTPFNTQGVGLDLEMLAPYIP
MDDDFQLRTVSPAESMCSSPGSVLELTPSSSTQTAPALPAAPPDLVSCDTVPQNIRTTKQ
GNSREIIQDSDISSKCQTNPKLLKRKLETIPLSEAIRLGSVLQVVNDFPEKRIRKSDASS
SEGLCHATILLLPSDVASRLLSRSEGGAIMMPLPQLTRYDCEVNAPVTGRQHLLQGEELL
CALDLVI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggattatatttgtgtatgtgttcattatagggtgagttcagagcgaaggaaggagaaa
tccagagatgcggcgcgttgtcggagaggaaaagagtcagaggtgttttatgaactggcc
agagaactgcccctcccccacagtgtcacctctaacctggataaagcatcggtcatgaga
ctcgcactcagttacctgcgcctgcgtaaactactgaacacagatatactggacgtggag
tctgaattagactctcagtggaacagttcatatctcaaagctctggacgggtttctcatg
gttctttctgctgatggcgacatcgtctacctgtcagagagtatcagcaagtgtctgggc
cttcctcagatcgaccttactggatacagtgtgtttgagtatactcatccatgtgaccat
gaggagctcagagaaatgctggcacacaggactggtctgtctaagaaagcgaaggagcag
cacacaaacagaagttttctgttgaggatgaaatgtacactgacaagcagagggcgcact
gtcaatgtcaaatctgcctcctggaaggtgctgcgctgttcgggccatatccacacaaca
gatggcatcaagaagggtgtgtgtgaggaaaaaaatgtgtgttcagcgtacctggtgctc
atctgtgagtctattccccacccggcgaacattgaggctcctctggattctagaacattt
ctcagccgccacactttagatatgcgcttcacctattgcgatgagaggatcacagagctg
ttgggttttgatccagtggatctgttgcaccattctgtgtatgaatactatcacgcgctg
gattctgaccacatgaccaaagcacaccacaacttgtttgtgaagggacaagtatgtact
ggacagtaccggctgctggctaaagcaggagggtttgcttgggcagagactcaagccact
gtgatatataacagtaaaaactctcagccacagtgtgtggtctgtgttaactacatcctc
agtggcattgaacagcccaaacaaatcatgtcccttcaacaaaccaacagcacaaaatta
aaacaggaacaggaagaacaccatgaggagtcactcgggactgaagtgactgtggcagag
ttgaaagaggaggcaaaggcaaaggatgagaagaaagaagagtgtgtgagagaggagcta
cacgacagcctgaaggggaagccagaggcactgactgtagtagaccctgtcctcacactg
gatatcaccagcacagactccgcaatctctgtgttgacagaaattcctctctacaatgat
gttatgttgccctcttcaagtgccctgctacccctctcacccctctctcctccctactcc
tccctaaatgatgatgatgcctccacagcccatctacaacctgactacttccccttccca
caatctttgactcctgattcttccagatcccaggttgatctccttgtggattcagaatta
agtgaccagctaaaaccggatcatgtggaaagactattttccatggatatagaggccaaa
acaccctttaatacacagggagtgggtttggacctggagatgttagctccatacattccc
atggatgatgatttccagctgcggactgtttctccagctgaatcgatgtgttccagccca
ggttcagtgcttgaactgaccccctccagcagcacacaaactgcccctgctctcccagca
gcccctccagacttagtgtcctgtgacaccgttccacagaacattagaaccacaaagcag
ggcaacagcagagaaattattcaagacagcgatatttcttctaaatgtcagacaaaccca
aagctactcaagaggaaactggagaccatacctttgtctgaagcaataaggctgggttct
gtgctgcaggtggtgaatgattttccagagaaaaggatcagaaaatcagatgcttcatca
tcagaaggtctttgtcacgccacgatactgttgctgccatctgatgttgcgagtaggtta
ttgagcagatcagagggtggagccataatgatgcccctcccccagcttacccgttacgac
tgtgaggtaaatgcacctgtgactgggcggcagcacctgctacagggggaggagctattg
tgtgccttggacttagttatttaa
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