KEGG   Sinocyclocheilus anshuiensis: 107676823
Entry
107676823         CDS       T04917                                 
Symbol
wdr48
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    107676823 (wdr48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sanh03400]
    107676823 (wdr48)
DNA repair and recombination proteins [BR:sanh03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     107676823 (wdr48)
SSDB
Motif
Pfam: DUF3337 WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML NBCH_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_SCAP ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_RIG_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_DCAF4 WDR54 Beta-prop_Vps41 WD_LRWD1 RAWUL Beta-prop_NUP159_NUP214 Nucleoporin_N Tfb2_C WD40_like
Other DBs
NCBI-GeneID: 107676823
NCBI-ProteinID: XP_016326990
LinkDB
Position
Unknown
AA seq 669 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSIN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHLWSVSRXXEGRQSYXGVNVCSPVFQMELDRSADP
HSAIWVSTTKSTVNKWSLKGIHNFRASGDYDNDCSAPLTPLCTQTEQLIKGGASIIQCHI
LNDKRHILTKDTNNNVAYWDVLKACKVEDLGKMEFDDEIKKRFKMVYVPNWFSVDLKTGM
LTITLDESDCFAAWVSAKDAGFTSPDGSDPKLNLGGLLLQALLEYWPRTHINPTDEETEL
NHGSVNGEHESRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVP
QWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINL
DSESQTGGSAAEKPSEQKEEEDMAVLAEEKIELLCQDQVLDPNMDLRTVKHFIWKSGGDL
TLHYRQKST
NT seq 2010 nt   +upstreamnt  +downstreamnt
atggcgacgcatcacaggcagaatgcagcggggcgcaggaaagtgcaggtgtcatacgtg
atcagagacgaggtggagaaatataatcgtaatggagtcaacgcactacagctggatcca
gctcttaaccggctcttcaccgccggacgagactccatcatcaggatatggagcattaac
cagcacaagcaggatccgtacattgcatcgatggagcatcacacagactgggtcaacgac
atcgtcctctgctgcaacgggaaaacattgatatcagcgtcatcagacactacggtgaag
gtctggaacgcacacaagggcttctgcatgtcaacactgcgaacgcataaggactatgtt
aaagcattggcatatgctaaagacaaagagctggtggcttctgcaggactggacagacag
atctttctctgggatgtgaacacactgaccgcgctgaccgcgtccaataacaccgttact
acgtcttctctcagcggaaacaaggactccatctatagtctggccatgaatcagatgggg
acggttatagtgtcaggatccactgaaaaggttctgagagtgtgggacccgcgaacctgt
gccaaactaatgaaactgaaaggacacacggacaacgtcaaatccctgctgctcaacaga
gacgggactcagtgtctctcagggagctcagacgggacgatccggctctggtctctgggt
cagcagaggtgtatcgccacgtaccgcgttcacgacgagggcgtctgggcgctgcaggtc
aacgaggcgttcacgcacctgtggagcgtgagcaggtaataggaaggaaggcaaagttac
tgaggtgtgaatgtgtgctctcctgtctttcagatggagctggaccgctcggctgatccg
cattcggccatctgggtttccaccacaaagtccacggttaataagtggtctctgaagggt
atccataatttccgagcgtctggagattatgacaatgactgcagcgctccgctgacgccg
ctgtgcacgcagacagagcagctgatcaaaggtggcgccagtataattcagtgccacatt
ctgaacgataaacgacacattctgaccaaagacaccaacaataacgtggcgtattgggat
gtgctgaaggcctgtaaagtcgaagacttgggcaagatggagtttgatgacgagatcaag
aaaaggttcaagatggtttatgtgccgaactggttttcggtggatctgaagacagggatg
ttgacgataacgctggacgagagcgactgctttgcagcctgggtttctgctaaagacgct
ggattcaccagccctgacggatccgaccctaaactgaatctgggcgggctgctgctgcag
gctctgctggagtactggcctcgcactcacatcaaccccacggacgaggagaccgaactc
aatcatgggagcgtgaacggtgagcacgagagccggatacagaagggaaacggatatttc
caggtgccgccgcacactccggtgattttcggtgaagcgggaggaaggacgttattcagg
ctgctgtgtcgagactcaggtggagaaactgagtccatgttactcaacgagacggtcccg
cagtgggtcatcgacatcaccgtggacaaaaacatgcccaaattcaacaaaatcccgttc
tacctccagccccattcgtcctccggagcaaaaacattaaagaaggatcgtttgtcggcc
agtgacatgttacaggtgaggaaggtgatggagcacgtgtatgaaaagatcataaacctg
gacagcgagtcgcagacgggtggttcggccgcagagaaacccagcgagcagaaggaggag
gaggacatggcagtgctagcggaggagaagatcgagctgctctgtcaagaccaggttctg
gatcccaacatggatctgcggacggtgaagcatttcatctggaagagcggcggcgatctg
acgctccattatcggcagaaatccacgtga

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