KEGG   Sinocyclocheilus anshuiensis: 107677266
Entry
107677266         CDS       T04917                                 
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
  KO
K19672  intraflagellar transport protein 140
Organism
sanh  Sinocyclocheilus anshuiensis
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sanh03037]
    107677266
Cilium and associated proteins [BR:sanh03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   107677266
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_RIG_2nd WD40_CDC20-Fz Beta-prop_WDR19_1st WD40_Prp19 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd tRNA_int_end_N2 TPR_COPA_B TPR_GEMI5 Beta-prop_CAF1B_HIR1 TPR_IFT80_172 Consortin_N Clathrin WD40_MABP1-WDR62_1st Beta-prop_ELP1_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 107677266
NCBI-ProteinID: XP_016327595
LinkDB
Position
Unknown
AA seq 1458 aa
MAVYFDHRVEAPDSSGAAVLISWHSSVCVLAVGSVNPSTGGCLDLYLQQGEHVELCHVER
GFSPSLLQWHPTKPLLAVGWETGETMLLSHPSGELTPLPNNTYNACITVLEWSSNGSRLV
TGDQAGVMAVWRVDARGKLQGSPLIKHDYSKPLTCCIFRPPPPAEDVAMLARAAVSGDES
ALDMFNWKKSNKGAAFALGSQEGLTFYISTADGSVYSVDEQARSVPLISVESKIQTMWYS
KRRDVLAVVTDSLLLSQFSLGPEGIAQEISKVKLSGRGVQHADIVWTENGLLITASGEQH
IRLWDVELDDHYALSLDESLGFEKGELLNCVSFCTSKQVLAAGTSRGRVALWHMVTVSDQ
KGDTKIHWKLQTPAEVEGNISQLQWGSSSHLLAVCSSSCVVILSEHVLCSHYSQQIAAVQ
LTPTQLSLANFNTNTHITFHTDTHIRAVQVTKDMVAVWNGKYITVYEPSGQTLHSTGSFQ
CESPALVVHEENIYTVEPNRVQIRTPQGTVKQLLAFSEAEGNPTQLSVCGSYLAVGTDTC
HVRVFDLTRREAKAMGVTKNLSELIPDLGALRSVKCNASGSQLSVLIAQVNGRPDNKVYF
YDIELDTLSHFDFFTGRPESSLAQSEDSQRTRCEGELAARCPVSQFWDENEPRLFVCETV
PVNSDLLCSSQSQTEKEDVLVVTFFVTQEHGLLLQDSQPKPATLLSLLALDTPYYYYICK
LLFRRGGLVLPDLGEGGDQVVSTPAAAPQVPSSPQMVVRRALRDFVGLESCEKQTRDAML
NFSFYLTIGDMDEAFKAIKLIKSEAVWENMAWMCVKSCRLDVARVCLGNMGNARAARALR
NAEKEPEVEAQVAVLATQLGMLEDAERLYKSCGRFDLLNKFYQAAGQWQQAVETAETHDR
IHLRTTYYSYAKHLEAMGDKNLALVYFEKSDTHRFEVPRMLMEDNLSLEIYINKMKDKDL
YKWWGHYLESQSDMEAALHYYDLAQDYLSQVRVYCYLGNIQKASEIANETGNRAASYHVA
RQYEGQDEISQSVHFYTRAQAYNNAIRLCKENNLDEQLMNLALLSNPEDMMDTAMYYEEK
GTHMDRAVMLYHKAGHVSKALELAFATEQFGALQLIAEDLNENSDPALLARCSDFFIKHA
QYQKAVELLVAAKKYHEALQLCLDQSLTITEDLAESLTVPKDSSHLSEAGRKELLEKIAD
CCMRQGNYHLATKKYTQAGNKIKAMRALLKSGDTDKIVFFAGVSRQKEIYVMAANYLQSL
DWRNDPEIMKNIIGFYTKGRALDLLAGFYEACAEVEIDDYQNYEKAYGALTEACKCLTKA
KGRSGDEADSKLLILTHKLGLVKRFIQARRMHEEDPVEAVRVCESLLEEKDLDPAVRVGD
VYGFLVEHYCHHGNFQQAWSKIEDLRSTRPNINLSLYVSQTSLEALQNAAGVRLVYRDTD
THAAEDDEEVEEDENINH
NT seq 4377 nt   +upstreamnt  +downstreamnt
atggctgtgtattttgatcatcgcgtcgaggcccctgacagcagtggagcggccgtcctg
atctcatggcattccagcgtgtgtgtgctggccgtgggctctgtgaacccctccactggg
ggctgcctggatctttacctgcaacagggggagcatgtcgagctctgtcatgtggaacgg
ggattcagcccctcgttgttgcagtggcacccgactaaacccctgctggcggtgggatgg
gagacgggcgagaccatgctcctctcacacccctccggtgaactcacacccctgcccaac
aacacatacaacgcctgcatcacagtgctggagtggagcagtaacggcagccgactggtc
acgggagatcaggcaggtgttatggcggtgtggagggtggacgctagagggaaactgcag
ggatctcctctgataaaacatgactacagtaaaccactgacgtgttgcatcttcagacct
ccaccacctgctgaggatgtggcgatgctggcccgtgctgctgttagcggagatgaaagc
gctctggacatgtttaactggaagaagagcaataaaggagcagcgtttgcgctgggatca
caggaaggactgacattctacatcagtactgctgatgggagtgtgtacagcgtggatgag
caggcgcggagtgtgccattgatttccgttgagagtaagatccagacgatgtggtactca
aagaggagggacgttctcgccgtggtaacagactcactgctgctctctcagttcagtctt
ggaccggaaggaattgctcaggagatcagtaaggtgaagctcagtggcagaggtgtgcag
cacgcagacattgtgtggacagaaaacggtttgctcatcactgcatcaggagaacagcac
atcaggttgtgggatgtggagttggatgatcattacgctctgtcactcgatgagtctctg
ggctttgagaaaggagaacttctcaactgtgtgtctttttgcacttctaaacaagttcta
gcagcaggtaccagcagaggtcgtgttgctctgtggcacatggtgactgtgagtgaccag
aagggagacacgaaaatacactggaaactccaaacaccagcagaggtggaaggaaacatc
tcacagctacaatggggttcgagctctcatctgttggccgtctgcagcagcagctgtgtg
gtgattctgtcagagcatgttctgtgttctcattacagccagcagatagcagcagtgcag
ctcacgccaacacagctcagcctggccaacttcaacaccaacacacacatcaccttccac
acagacacacacatcagagccgtgcaagtcaccaaggatatggtcgcggtgtggaacggg
aaatatatcactgtgtacgagccatcaggacaaaccctacatagcacaggttctttccag
tgtgagtctcctgctcttgtggttcatgaagaaaacatttatactgtcgaaccaaaccgt
gtccagatccgcacaccacagggcaccgtgaagcagttgttggcattttctgaagcggaa
ggaaacccgacacagctgagtgtgtgtggatcttacctggctgtgggaacagatacgtgt
catgtcagagtctttgacctcacacgcagggaggccaaagccatgggcgtcacgaagaac
ctctctgagctcattcctgacctgggcgctctgagatcagtcaaatgcaatgccagcggc
agtcagttgagcgtcctcattgcacaggtgaacgggcggccggataacaaagtgtatttc
tatgacatcgagctggacacgctgtctcacttcgacttcttcacagggaggccagagagc
agtctcgcacagtccgaggacagtcaaagaactcgatgtgagggggagttggccgcccgc
tgccctgtttctcagttctgggacgagaacgagccacgtctgtttgtgtgtgaaacagtt
cccgtgaactctgacctcctctgcagcagccaatcacaaacagagaaggaggacgtgttg
gtggtgacgttctttgtgacacaggaacatggtctcctcctgcaggactcacagcctaaa
cctgctacgctgctctctctactggctttagatacaccgtattactattatatttgcaag
ctcttatttcggaggggaggcctcgttctccctgatctgggtgagggtggagatcaggtg
gtctcgactcccgccgctgcgccccaggtgccttcgtcccctcagatggtagtacgacga
gccctccgagactttgtggggttggagagctgcgagaagcagacccgagatgccatgctg
aactttagcttctacctcactataggggacatggatgaagcatttaaagccatcaaactc
atcaagagtgaggcagtgtgggagaacatggcgtggatgtgtgtgaagagttgtcgtctg
gacgtggcgcgcgtgtgtctggggaacatgggtaacgcacgggccgcacgtgctctcagg
aacgctgaaaaagagccagaggtggaggcacaggtggccgtactggctacacagctgggc
atgctggaggatgcagagcgtttgtataagtcgtgcgggaggtttgatttattgaataag
ttttatcaggcggcaggtcagtggcagcaggcggtggagacggcagaaacgcacgaccgc
attcacctccgaaccacttactacagctacgccaaacacctggaggccatgggagacaag
aacctagcactggtgtattttgagaagtcagacacacatcggtttgaagtgccgagaatg
ctgatggaggataatctttcactggagatctacatcaataaaatgaaggacaaggatctg
tataagtggtggggtcattatctagagagccaatcagacatggaggctgcgctgcattac
tacgacctcgctcaggactacctgtctcaagtgcgcgtgtactgttatctaggaaacatt
caaaaggcgagtgagatagccaatgagaccggcaacagagcagcgtcttatcacgttgca
cggcagtacgagggacaggatgaaatcagccaatcggtgcacttctacacacgagcgcaa
gcctataacaacgccatccgactgtgtaaagagaataacctggatgagcagctcatgaat
ctggcgctgcttagcaatccagaggacatgatggacacggccatgtattatgaagagaaa
ggaacgcacatggaccgagccgttatgctttatcataaggcaggtcacgtgtctaaggct
ttggaactagcttttgccacagagcagtttggagctctgcagctgatcgcagaggacctg
aatgaaaacagtgaccctgccctactagcacgctgctctgatttcttcataaaacacgct
cagtaccagaaagctgtggaactgctggtggctgccaaaaagtaccatgaggcgctccag
ttgtgtttggaccagagtttgaccatcacagaagatctggccgaaagtctgacggtgcca
aaagactcgtcccatctgtctgaggccgggagaaaggagctgctggagaaaatcgcagac
tgctgcatgcggcagggcaactaccacttagccactaagaaatacacacaagctggaaac
aagatcaaggcgatgcgagcgctgttgaaatccggggatacagataaaatagtgtttttc
gcaggtgtttccagacagaaggaaatttacgtaatggcagccaactacctgcagtcactg
gactggaggaacgatccggagatcatgaagaacatcatcggcttctacacaaaaggacga
gcacttgatctgctcgccggcttttatgaagcctgtgctgaggtggaaattgatgattat
cagaattacgagaaggcatatggcgctcttacggaggcatgcaagtgtctgactaaagca
aagggtcgcagtggagacgaggctgacagcaaactcctcatactgacacacaaactcggc
cttgtcaagagattcattcaggcacgaaggatgcatgaggaggatccagtggaagcggtg
cgtgtgtgtgagtctttgctggaagagaaggatctggaccctgcggtgcgtgttggagat
gtgtatgggttcctggtggagcactactgccatcatggcaacttccagcaggcttggagt
aaaatagaggacttgagatcaacacgtcccaacataaacttgagcttgtacgtgagtcaa
accagtctggaggctctacagaatgctgctggagtccgtctggtctacagagacacggac
acccatgctgccgaggatgatgaagaggtggaggaagatgagaacatcaatcattga

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