KEGG   Sinocyclocheilus anshuiensis: 107677463
Entry
107677463         CDS       T04917                                 
Name
(RefSeq) spliceosome RNA helicase DDX39B
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03013  Nucleocytoplasmic transport
sanh03015  mRNA surveillance pathway
sanh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107677463
  09122 Translation
   03013 Nucleocytoplasmic transport
    107677463
   03015 mRNA surveillance pathway
    107677463
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sanh03019]
    107677463
   03041 Spliceosome [BR:sanh03041]
    107677463
Enzymes [BR:sanh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     107677463
Messenger RNA biogenesis [BR:sanh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107677463
Spliceosome [BR:sanh03041]
 Complex C
  Other components
   EJC/TREX
    107677463
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107677463
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Cas3-like_C_2 AAA_19
Other DBs
NCBI-GeneID: 107677463
NCBI-ProteinID: XP_016327859
UniProt: A0A671R7S3
LinkDB
Position
Unknown
AA seq 435 aa
MTENDVENELLDYEEDEVDAGGAADTGLGHNDGLISIRKEGVKGSYVSIHSSGFRDFLLK
PELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQ
VSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKESPHVVVGTP
GRILALSRNKSLNLRHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSK
EIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIF
VKSVQRCIALAQLLVEQNFPAIAIHRAMPQDERLARYQQFKDFQRRILVATNLFGRGMDI
ERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDARTLNDVQDRFEVNISE
LPEEIDISSYIEQTR
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgacggagaacgatgttgagaatgagctgttggactatgaggaggatgaggttgatgca
ggtggtgccgcggacacaggacttggacacaacgatggcttaatatccatcaggaaagaa
ggggtcaaagggtcatatgtgtccatccactcctcaggattcagggatttccttctcaaa
ccagaactgctgagagctatagtggactgtggctttgaacacccatccgaggttcagcat
gaatgcattcctcaggcgatcctggggatggatgtattatgtcaggccaagtctggaatg
gggaagacggctgtctttgtgttggccacacttcagcagctggagccagtgacagggcag
gtatccgtgttggtgatgtgtcacacccgagagctggccttccagatcagcaaagagtac
gagcgcttctccaaatacatgcccagtgtcaaggtggcagtgttctttggtggcttatct
ataaagaaggatgaggaggttctgaagaaagagagccctcatgtggtggtgggaactcct
ggacgtattctagctctgtctcgcaacaagagtctcaacctgcgccacatcaagcacttc
atcctggacgaatgtgacaagatgctggagcaactcgacatgcggcgtgatgtccaggag
atctttcgtatgacccctcacgagaagcaggtcatgatgttcagtgccaccctgagtaaa
gagatccgtcccgtctgcagaaagttcatgcaagatccgatggaaatttttgtggacgac
gagaccaagctgacgcttcacggcctccagcagtactacgtcaagctgaaggacaacgag
aagaacaggaagctctttgacctcctggacgtgttggagttcaaccaggtggtgatcttc
gtgaagtccgtgcagcgttgtattgctctggctcagttgctggtggagcaaaatttccct
gccattgccattcatagagcaatgcctcaagacgaaagattagctcgatatcagcaattc
aaggatttccagagacggatcctggtggccacaaacctgtttggccgaggtatggacatc
gaacgagtcaacatcgccttcaactacgacatgcctgaagattcagacacatacctgcac
agggttgcaagggccggcaggtttggaacgaaaggtctggccatcacctttgtgtcagat
gagactgatgcccgcactttgaacgatgttcaggacaggtttgaggtgaacatcagcgaa
cttccagaggagattgacatctcgtcatatattgagcaaacacgataa

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