KEGG   Sinocyclocheilus anshuiensis: 107679009
Entry
107679009         CDS       T04917                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03020  RNA polymerase
sanh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107679009
  09124 Replication and repair
   03420 Nucleotide excision repair
    107679009
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sanh03021]
    107679009
   03400 DNA repair and recombination proteins [BR:sanh03400]
    107679009
Transcription machinery [BR:sanh03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     107679009
DNA repair and recombination proteins [BR:sanh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107679009
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Ogr_Delta Zn_ribbon_recom Zn_Ribbon_TF Zn_ribbon_GRF_2 HVO_0758 Zn_ribbon_NrdR GpA_ATPase Lar_restr_allev SR1P Zn_ribbon_Top1 DZR
Other DBs
NCBI-GeneID: 107679009
NCBI-ProteinID: XP_016329900
UniProt: A0A671LHH3
LinkDB
Position
Unknown
AA seq 126 aa
MDLEGGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKIT
HEVDELTQIIADVAQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHC
GHRWTE
NT seq 381 nt   +upstreamnt  +downstreamnt
atggatttggaaggtggcacgtatgaacctggatttgtgggcatccggttctgtcaggag
tgtaataacatgttgtatcctaaagaggataaagaaaaccgcatcctgctctatgcttgc
agaaactgtgactatcaacaagaagccgacaacagctgcatctatgtgaacaaaatcacc
catgaggttgatgaactcactcagattattgcagacgtggctcaagatccaacactgcct
cggactgaggaccacccttgcccaaagtgtggccacaaggaggcggtgttcttccagtct
cacagcatgaaggctgaggatgccatgaggctttactatgtatgtactgccccacactgt
ggccacagatggacagaatga

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