Sinocyclocheilus anshuiensis: 107680444
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Entry
107680444 CDS
T04917
Symbol
pbrm1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107680444 (pbrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sanh03021
]
107680444 (pbrm1)
03036 Chromosome and associated proteins [BR:
sanh03036
]
107680444 (pbrm1)
Transcription machinery [BR:
sanh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107680444 (pbrm1)
Chromosome and associated proteins [BR:
sanh03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
107680444 (pbrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
107680444
NCBI-ProteinID:
XP_016331813
LinkDB
All DBs
Position
Unknown
AA seq
1637 aa
AA seq
DB search
MGSKRRRATSPSSSVSGGDFEDSQTTSIPSTSRKRRRTTNIPTVDPIAVCHELYNTIRDY
KDDQGRMLCELFIRAPKRRNQPDYYDVVSQPIDMMKIQQKLKMEEYDDVEQLTADFQLLF
NNAKTYYKPETPEYRAACKLWDLYIRTKNEFVQRGDYDEDDDDDDSQENPGGATEEESIS
SLKEVLGQLLEVVLMYTEHGRLISELFQRLPSKVQYPDYYAVIKEPIDLKTIAQRIQMGF
YKSVNHMTKDIDLLVKNAKTYNEPGSQVFKDANTIKKIFAQRKLELEHSEPIKSSIRIRN
RRFAQGDRLSSITTALQYGSESEEDAILTGSVHYDEGESEADSIHSSMDMSNPIFQMYEA
VRGCRNNQGELLAEPFFQLPSRKDYPDYFQQISHPISLQQIRSRMKNNEYESVEQIDTDL
NLMFENAKRYNVPNSQIYKRVLKLQHILQMKRKELTRRDDEDGDSMLSSTLSDGGSTKRK
SYKKNTKKNRMKALYAAVAEAREMGTGRRLCDLFMVKPSKKDYPDYYKIILEPVDLRTID
HNIRSDRYPSEDAMMEDMKLMFRNARHYNEEGSQVYNDANILEKVLREKRRELGPPPDDD
DIISPKLKIRKSGISPKKSKYLTPLQQKLNELYEAVKNYTDKRRRRLSTIFLRLPSRSEL
PEYYVAIKKPIDMEKVKSHMLANKYQDVDALVEDLVLMFNNACTYNEPESLIYKDALVLH
KVLLETRRDLEGGDDGNVPDVARLIQELIRNLFVSVLGHQDDEGRCYSDSLAEIPAVDPN
NPDKTPLNFEIIRANVDKGRYRRLDVFQDHMFEVLEKARRLHRTDSEIFEDSVELQQFFI
RIRDELCKNGEILLSPALSYTTKHLHSDVEKEKKEKLPKEYEEDKLKREEEKKEAEKSED
TAGGGWQGALQRNYSQDCSFKDNMYHVGEYVYVEPTEPNLQPHIVCIERLWQDDAGENWL
YGCWFYRPNETFHLATRKFLEKEVFKSDYYNKIPVSKILGKCVVMFVKEYFKLQPDSFRP
EDVFVCESRYSAKTKSFKKIKMWTMPLSSVKFVLREVPLPVVRVASMFAPKQDSEKPPEV
AEDGKAVPSIIDKEREDVTTEVSNGEPGCQYYEQLCYNDMWLKVGDCVYIRSHGLVRNRV
GRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKELFLSNLEETCPMTCMGGKCTVS
SFKDFLSCRPTEMPEEDVLLCESRYIESEKQMKKFKGLKRFSLSAKVVEDEIYYFRKLIV
PQKEPSPLLDKKIKELEAKFADMTDEELEDLGDDDGDGSDAHCMPQLQTQLTSDMDMLHY
APPQSTPKSIKGLSKKEGAKRKINMSGYILFSSEMRAVIKAQHPDFSFGELSRLVGTEWR
NLEATKKAEYEERAAKVAEQQERERAVHQNSPRAGTPVGALMGVVPPPTPMGMFSHSMTP
MAGMMGSYRPPMQPFQGSVNGMINLAGMPPHPMRLPTLPLYSLWGMPSMPYPGVNGMAPG
STGSTYGTQMGVMNSGQQAPPPYPGQGQVGQPALHQPSTPIFVAPPPKPQRLLHSEAYLR
YIEGLSAESTTVSKWDQTLSARRKNVRLTKEQESRLPSHWLKSKGAHKTMADALWRLRDL
MLRDTLNIQQTYNIQNL
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaaagcgacggagagccacttctccgtccagcagtgtgagcggaggagatttt
gaggacagccagaccacatccataccttcaaccagtcggaagaggagaagaaccacaaac
atccccactgttgaccccattgccgtgtgtcacgagttgtacaacactatcagagactat
aaggatgatcagggcaggatgctgtgtgaactcttcatcagagcaccaaagagaaggaac
cagccggattactatgatgtggtgtctcagcccattgacatgatgaaaatccagcagaag
ctgaagatggaggagtatgacgacgttgagcagctcacagctgattttcagctcttattc
aacaatgccaagacatactacaaaccagaaactccggagtacagagcggcttgtaaactg
tgggatctgtatattcgcaccaaaaatgagtttgtgcagcgaggggactatgatgaagac
gatgacgatgacgactcacaggaaaaccctggaggggccacagaggaggagtctatctcg
agccttaaggaagttcttgggcagcttctggaagttgtgctgatgtacaccgaacacggg
cgtctcattagtgaacttttccagagacttccctctaaagtgcaatatccagattattat
gctgttattaaagaaccaatagatctgaagaccattgcacaacgaatacagatgggcttc
tataaaagtgtaaaccatatgactaaagacattgacttgttagtcaaaaatgccaaaacc
tacaatgaacccggatcacaagtatttaaagatgcaaacaccatcaaaaagatttttgca
cagagaaaactggagcttgaacattcggaacctattaaaagcagcatcaggatcaggaac
agaaggtttgcacagggagaccgactctcctccatcactactgctctacagtatggctca
gagagtgaagaggacgccatattaaccggctctgttcattacgatgagggcgagtcagaa
gctgacagcatccactccagcatggacatgagcaaccccatcttccagatgtacgaggca
gtgcggggctgtaggaacaaccagggagagcttttagccgagcccttctttcagcttccc
tccaggaaagattaccccgactacttccagcaaatcagccatccaatctccctccagcag
ataaggagtaggatgaagaacaatgagtatgaaagtgtggaacagatagacacagacctc
aacctgatgtttgagaacgcaaagcgctacaatgttcccaactctcaaatctacaaacgt
gtgctaaagttgcagcatatattgcagatgaagaggaaagaactgacgaggagagatgat
gaagatggagatagcatgctgtcatctactctttctgatgggggcagcaccaagcgcaaa
agctataagaagaacacaaagaagaaccgcatgaaggctctgtacgctgctgtggcagag
gctcgggagatgggcacaggccggagactctgtgacctgtttatggtcaagccctcaaaa
aaagactacccggactactacaagattatactggaaccagtggacctgaggaccatcgac
cacaacatccgctctgacagataccccagcgaggacgccatgatggaggacatgaagctg
atgttccgtaatgcacgtcattacaatgaagaaggttcacaagtttacaatgacgccaac
attctggagaaggtattaagagaaaaacgaagggaacttggacctccgccagatgacgat
gacatcatttcacccaagctgaaaattaggaagagtggcatctctcctaaaaagtccaag
tacctgactcctctgcagcagaaactcaatgaactctatgaagcagtgaagaactacacc
gacaagcgtagacggcgtctcagcacaatcttcctccgtcttccatcccgctccgagctt
ccagaatactatgtggctatcaagaaacccatagacatggagaaggtgaagagccacatg
ctggccaacaagtaccaggatgttgatgctttggtggaagacttagtgctgatgttcaac
aacgcgtgcacctacaacgaacctgaatcactgatctacaaagatgcattggtgcttcac
aaagtgcttttggagaccaggagagacttggagggaggtgatgacgggaatgtcccagat
gttgcacggctaatccaggagctcattcgcaatcttttcgtctcagttcttggtcaccag
gatgatgaaggacgttgctatagtgactcactggcagagattccagctgttgatcccaac
aatcccgataagactccattgaactttgagatcatcagagctaatgtggataagggccgt
tataggagactagatgtgttccaggaccatatgtttgaagttttggagaaagccagacgt
ctgcacaggacggattctgagatctttgaggactctgtggagctccagcagttctttatc
cggatccgagatgaattgtgtaagaatggagagattctgctgtcgccggccctcagctac
accactaaacacctgcacagcgacgtggagaaagagaagaaagagaagctgcctaaagaa
tatgaagaggataaactcaagagagaggaggagaaaaaggaggctgagaagagtgaggac
acagcaggtggtggatggcagggagccctacaacgcaactacagccaggactgcagcttc
aaagacaacatgtaccatgtgggagaatatgtttatgtagaacccacagaaccaaacctg
cagccgcacattgtctgcatagagcgcctctggcaagatgatgcaggagagaactggctt
tatggctgctggttctatagacccaacgaaacatttcatcttgccacacgcaaatttctt
gagaaagaagttttcaaaagtgactattacaacaaaattcctgtcagtaaaatactgggc
aaatgtgtcgtcatgtttgtgaaggagtatttcaagcttcagcctgacagcttcagacct
gaagatgtttttgtctgcgagtctcgttattctgcgaaaaccaagtccttcaaaaagatc
aagatgtggacgatgcccttgagctcagtaaagttcgtcctacgtgaagtgccgttgcct
gtggttcgtgtggcctccatgtttgcacccaagcaggacagtgagaagcctcctgaggtg
gcagaggatggcaaagctgtaccttctattattgataaggagagggaggatgttaccacg
gaggtcagtaatggagagccaggctgccagtactatgaacagctctgctacaacgacatg
tggctgaaagtgggagactgtgtctatatccgctctcatgggctcgtacgcaaccgcgtg
ggcaggatagagaagatgtgggtgcgagatggagccgcttactttttcggccccatcttc
atccatcccgaggagactgagcatgaacctactaagatgttctacaagaaggaacttttc
ctcagtaacctggaagaaacctgccctatgacctgtatgggagggaagtgtacagtgtct
tctttcaaagattttttgtcatgccggccaactgaaatgccggaggaggatgtgttgctg
tgtgagagccgctacatagagagtgagaagcaaatgaagaagtttaaagggctgaaacgt
ttctctctgtctgccaaagtagttgaagatgaaatctattactttcgaaagctcatagtg
cctcagaaggagccgtctccactgctggataagaagatcaaggagttggaggccaagttt
gcagacatgacggatgaagagctggaggatttgggggatgatgatggggacggctctgat
gctcactgcatgccgcagcttcagactcagctgaccagtgacatggacatgctacattat
gctcccccgcagtccacaccaaagtctattaagggtctgtcaaagaaggagggggcaaag
aggaagatcaacatgagtgggtacatcctcttcagcagtgaaatgagagcagtcatcaag
gcccagcaccctgacttctcctttggagaactgagtcgactggtgggcacagagtggagg
aaccttgaggccactaagaaagctgagtacgaagagcgggcagcaaaggtagcggagcag
caggagcgagaaagagcagtgcatcagaactccccaagagcaggtaccccagtaggggcg
ctcatgggggtagtacctcccccgacccccatggggatgtttagccacagcatgacacct
atggcaggcatgatgggtagttacaggccacccatgcagccctttcaggggtctgtcaat
ggcatgattaacttggccggcatgcctccgcatcccatgaggctgcctaccctacccctc
tactccctgtggggtatgcctagcatgccatatccgggtgtgaatggaatggccccaggt
tctactggaagcacttacgggactcagatgggtgtgatgaactcaggccagcaggccccg
ccaccctacccaggacaggggcaggttgggcagcctgctctgcatcaaccctccaccccc
atatttgtggctcctccacccaaaccccagcgactgctccattcagaggcttacctgaga
tatatagaaggactcagtgctgagtccactactgtcagcaaatgggaccaaacactctct
gctcgcaggaaaaatgtccggctcacaaaagagcaggagagccgtctgccctctcactgg
ctgaagagtaagggagctcacaagaccatggctgatgctctgtggcgacttcgggaccta
atgctacgagacacactaaacattcaacagacctataacatccaaaacctctga
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