Sinocyclocheilus anshuiensis: 107680485
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Entry
107680485 CDS
T04917
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03018
RNA degradation
sanh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107680485
09123 Folding, sorting and degradation
03018 RNA degradation
107680485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107680485
03041 Spliceosome [BR:
sanh03041
]
107680485
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107680485
mRNA degradation factors
5'-3' decay
Lsm complex
107680485
Spliceosome [BR:
sanh03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107680485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
107680485
NCBI-ProteinID:
XP_016331854
UniProt:
A0A671PNP0
LinkDB
All DBs
Position
Unknown
AA seq
148 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVLSKGRGRGGMQQNKPQGKGRGGGPGRGGGAGRGVFGG
RGRGMMGTGHGQQQDKKPGKPQGVKNQH
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgctcccgttatctttactgaagacagcacagaaccacccgatgctggtggagttaaag
aatggtgagacgtacaacggccatctggtcagctgtgacaactggatgaacatcaacttg
agagaagtcatttgcacttcacgggatggagataaattttggaggatgccggaatgctac
atcagaggaagcaccattaaatacttacgaatccctgatgagatcatagatatggtgaaa
gaggaagtactgtcaaagggacgtggccgggggggcatgcagcagaacaaaccacaggga
aagggcagaggaggcggacctggaagaggtggtggagccggcagaggtgtttttggtggc
cgtgggagaggcatgatgggaactggccatggacaacaacaagacaaaaagcctggaaaa
ccacaaggtgtcaaaaaccaacactag
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integrated database retrieval system
