Sinocyclocheilus anshuiensis: 107680632
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Entry
107680632 CDS
T04917
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107680632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107680632
Enzymes [BR:
sanh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
107680632
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107680632
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107680632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_4
LRR_8
LRR_14
LRR_1
LRR_LRWD1
C2_GRDP
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
107680632
NCBI-ProteinID:
XP_016332110
UniProt:
A0A671RMR9
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MPKEKYDPPDSRRMYTIMSSEEANSGKKSIWDGLEITGNVRSLSSGLWSLTHLTALHLSD
NSLSRIPPEIAKLHNLVFLDLSSNKIRSLPAELGNMVSLRELLLNNNQLRVLPFELGKLF
QLQTLGLKGNPLTQEIMSLYQEPDGTRRLLSYLLDNLNGAIKCIPTEPPPSRSWIVLQEP
ERTRPTALLTVMCYNVLCDKYATRQLYGYCPSWALNWSYRKKSIMQEILSCNADIISLQE
VETEQYHNYFLVELSKQGYDGFFSPKSRARTMSESDRKHVDGCAIFYKTEKFSMLQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELKELMELSSGKSIHSMEKQLLLVANAH
MHWDPEYSDVKLVQTMMFLSEVKNIRDKASRSLKLSSVSGETNSIPLVLCADLNSLPDSG
VVEYLSTGGVDCTHKDFKELRYSDSLTNFNCNGKNGTSNGRITHGFKLKSAYENVLMPYT
NYTFDFRGVIDYIFYSRPQLNVLGVLGPLDTNWLLENNISGCPHPHIPSDHFSLFAQLEL
VLPYPPPLNGVHLAGHR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagagaaatatgacccgcctgattccaggcggatgtacactatcatgtccagt
gaggaggcaaacagtgggaaaaaatccatctgggatgggcttgaaataactggtaatgtt
cggagtctcagctcgggcctttggtcgctcacgcacctcactgctctgcacctcagtgac
aactccctgtcacgcatcccacctgaaattgccaagctgcacaaccttgtgttcttggac
ctgtcgtccaataagatcaggagcctgccagcagagcttggcaacatggtgtctctcagg
gaactgcttttaaataacaaccagttgcgggttctgccattcgaattggggaaattgttt
cagttacaaacacttgggttaaaaggcaatccactcactcaagaaattatgagcctctac
caggagccagatggtacccggcgactgctaagctaccttttggacaatcttaacggtgct
atcaagtgcatcccaacagagccacctccgtccaggtcctggattgtgctgcaggagcct
gaaagaacaagaccaacagccctgttaactgtaatgtgctacaacgtgctgtgtgataag
tacgccacacgtcagctctacggctactgcccatcctgggcccttaactggagctacagg
aaaaagtccattatgcaggaaatcctcagctgcaatgcagatattatcagcttacaggaa
gtggagacagagcagtatcacaactacttccttgtggagctgagtaaacagggatatgat
ggatttttcagcccaaaatcccgggccagaaccatgtctgaatcggacaggaaacatgta
gatggatgtgcaatattctacaagactgaaaagttcagcatgttgcagaaacacacagta
gagtttaaccagctggctatggccaattcagagggctcagaggctatgttgaatcgggtc
atgaccaaggacaacattggggtggctgtgttgctggagctaaaggagttaatggagttg
tcatcaggtaagtctatccattctatggagaagcagctcctactagtggctaatgctcac
atgcactgggacccagaatattctgacgtgaagctggtacagaccatgatgttcctgtca
gaggtgaagaatatcagagacaaagcctcccgcagtctgaagctctcctccgtgtcggga
gaaaccaacagcatccctttggtgctttgtgccgacctcaactcgcttcctgactcgggt
gtagtggagtacttgagcacaggtggggtggactgcacacacaaagacttcaaggagctg
cgctacagtgacagcctgaccaactttaactgcaacggcaaaaatggcacatctaacggg
aggatcacgcatggtttcaagctaaagagtgcctacgagaacgtgctcatgccttacacc
aattacacttttgatttcagaggtgtcattgactacatcttctactccagacctcaactg
aacgtgctgggcgtcctcgggcctttggacacaaactggctccttgagaacaatatcagt
ggttgcccacaccctcacatcccctcagatcacttctccctgtttgcacaactggagctg
gtcctgccttatcctccccctctcaatggagtccacttagctggacacaggtag
DBGET
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