KEGG   Sinocyclocheilus anshuiensis: 107681888
Entry
107681888         CDS       T04917                                 
Name
(RefSeq) symplekin-like
  KO
K06100  symplekin
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03015  mRNA surveillance pathway
sanh04530  Tight junction
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107681888
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    107681888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sanh03021]
    107681888
   03019 Messenger RNA biogenesis [BR:sanh03019]
    107681888
Transcription machinery [BR:sanh03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     107681888
Messenger RNA biogenesis [BR:sanh03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     107681888
    U7-dependent histone pre-mRNA processing factors
     107681888
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N PDS5 HEAT_MROH2B_C GNC1_N Adaptin_N V-ATPase_H_C Cohesin_HEAT Rep_Org_C Cnd1
Other DBs
NCBI-GeneID: 107681888
NCBI-ProteinID: XP_016333742
UniProt: A0A671RJX5
LinkDB
Position
Unknown
AA seq 1244 aa
MASGVGEQAHGSVASQFYSNEEETAVDMTTSEKVVDLLNQAALISTEEKLIVLKQVQELI
INKDPSLLDNFLDEIIAFQTDKSIEVRKFVIGFIEEACKRDSELLLRLIANLNMLMRDES
VNVVKKAILTLTQLYKVALQWLVRTKSVSDMQEACWDMMTQIKEDVLALLDSDNDGVRTH
AIKFTESLIITLSPRTPDSDTPKKQEGDISLDKIPKDHTYIRYDTLCEEGKLALEQLLKF
MVHPAISSINLTTALGSLATLARQRPMFMSEVVQAYETLHANLPPTLAKSQVSSVRKNLK
LHLVSVLKHPSSVDFQGQISTLLLDLGMSQSEITRCTPATVQPRKRLHHEPYVEGKRIKM
EASLVEDDEDKEEPAPVVTTKPSSSVGTQSAIDLTAEFLLPLLTPDNVANLVLISMVYLP
EVMPASFQATYTPVESAGTDAQIKHLARLMATQMTGAGLGPGLELCKARDEEVKEEYGGA
GESSSKDPLIIRKLSAVSLGQAISVVGAPAAYKSPITEEAPQIKKFPEPILPTTQPKAPG
ASGRKKVFKLADVVQPFSEAQIEKLTNMAIKRILQSEKVIAQSGMSHVRVKLLARLVTQF
EGGKKNDLLQFILEDMRGRSELAFSLLYHEYNEYLSQQPPSSLDSYEHCLYTLLSGLQEK
PEQRDGLFTKLVLEAPVITDSALEVIQRYCEDESRVYLGMSTLKELILKRPSRQYQYLNV
LLNLSSHEKEKVRSTALSFIKRMYEKEHLKDCIEKFALTYMQFLVHPNPPSLLFGAGEDT
EVAAPWTEETVRQCLYLYLSLLPLNHRLVHELAAVYTEAIADIKRSVLRVIEQPIRGMGM
SSPDLLLLVENCPKGAETLVTRCLHILTDKVPPSPELVERVRDLYHKRVPDVRFLIPVIN
GLEKNEVIQALPKLIKLNPIVVKEVFNRLLGTQHSEGSSSISPLTPGELLIALHNIDSSK
CDMKSIIKATNLCFGEKNVYTSEVLAVVMQQLMEQTPLPILLMRTVIQSLTMYPRLAGFV
MNVLARLILKQVWKYPKVWEGFVKCCQRTKPQSYNVLLQLPPPQLASVFERCPEMREPLL
QHVHSFTPHQQAHIPVSIMAVLEANSRKPEPEPQPELHHPEIIEEREVPVPKHISMPAPV
SQAEPPAPTPVEFTEPPPPQQIPRREEVEEPMEREETDHAALEVTSEAASQQVEVSEEAS
HSNSISEKTDEPMEESAAMPVDVADQPKDESEDVVPEAGESSVD
NT seq 3735 nt   +upstreamnt  +downstreamnt
atggcgtcaggcgtgggagaacaagcacatggtagcgtggcctcccagttctacagcaat
gaggaagaaacagccgttgacatgaccactagcgagaaggtggtggacttgctaaaccag
gcggccctcatctctacagaggaaaagcttattgttctcaaacaggtgcaggagttgatt
atcaacaaggacccttcattgcttgataattttctggatgaaatcatcgcatttcagact
gataaatcaattgaggtgcgaaagtttgtcatcggattcattgaggaggcatgtaaaaga
gacagtgagctgcttctgaggctgattgccaacctgaacatgctgatgagagatgagagt
gtgaatgtggtgaaaaaggccattctgacgctcactcagctatacaaagtggctttacag
tggctggtgcgcactaagagtgtctcggacatgcaggaggcatgctgggatatgatgacc
cagataaaagaggatgttctggccttgctggattccgataacgatggagttcgcactcat
gccatcaaattcacagagtccctcatcatcacgctgtcaccacgtacacctgactctgac
acgcccaagaaacaggagggagacatcagcctggacaaaatccccaaagaccacacatat
attcgatatgacaccttatgtgaggagggtaagttggctctggagcagttgttaaagttt
atggtgcaccctgccatctccagcattaatctcaccactgcactgggatcactggccacg
ctggccagacagcggcccatgttcatgtctgaggtagtgcaggcctatgagacgctacat
gctaacctgcccccaactctggctaagtctcaagtgagcagtgtgcgcaagaacctgaag
ctgcacttggtctcggtgctgaagcaccccagcagcgtggacttccagggccagatttcc
actctgctgctggacctcggcatgtctcagagtgagatcacccgctgcacaccagccact
gtacagccccgtaagaggctccaccatgagccctacgttgagggcaagaggatcaagatg
gaggcctctctagtggaggatgatgaggataaagaagaaccagctccagtcgtcaccaca
aaaccatcctcctctgttggcacccaatcagccatcgatctcactgctgagttcctgttg
cctctgctgactccagacaatgtggccaacctggtgctcatcagtatggtttacctgcct
gaagtgatgccggcctctttccaagccacctacacacctgtagaatcagccggcactgat
gcccagataaaacacttagccaggctgatggccacacagatgactggggctggcctggga
ccagggctggagctgtgtaaggctcgagatgaagaggtgaaggaggaatatggtggagcg
ggtgagtccagctccaaagaccctctcatcatccgcaagctgtctgctgtgtccctgggt
caagccatctcagtggtgggggcgccagcagcctacaagagccctatcactgaagaggca
cctcagatcaagaagttcccagagcccatactgcccaccacacagcccaaagctcctggg
gccagtggcagaaaaaaagtgttcaaattggccgacgtggtgcagccattttcagaggct
cagattgagaaactcaccaacatggccatcaagcggatcctccaatcagaaaaggtcatt
gcacagagtgggatgtcccatgtccgtgtgaagctgcttgcacggttggtgacccagttt
gagggtgggaagaaaaatgacttgttgcagtttatcttggaggatatgcggggcagaagt
gagctggccttttctctgctgtaccacgagtacaatgaatacctgagtcagcagcccccc
agctctctggacagctatgagcactgtctgtacacactgctgtctggcctgcaggagaaa
cctgagcagagggatgggcttttcaccaagcttgtgttggaggctccagtcattacagac
tcagcactggaggtgattcaacgctactgtgaggacgagtcacgtgtttacctaggcatg
tccacattaaaggagctcatcctcaaacgcccatccagacagtaccagtacctcaatgtc
cttctgaacctcagctctcacgaaaaagaaaaggtgcgctccactgctctcagcttcatc
aagcgcatgtatgagaaggaacatctgaaggactgtattgagaagtttgctctcacctac
atgcagtttctggtccacccaaacccaccttctcttctgtttggagcaggagaggataca
gaggtggcagctccctggacagaggaaacggtgcggcagtgcctttacctctatctctcc
ctccttcccctcaaccatcgtctggtgcatgagctggctgctgtctacaccgaggccatc
gctgacatcaaacgcagtgtgctcagggtcatcgaacagcctataagaggaatgggaatg
agctctcctgacctgctgctcctggtggagaactgtcctaaaggagcagagacgctggtc
actcgctgtctgcatatactcactgataaagtgccgccatctcctgagctggtggagagg
gtgagggatctttatcataagcgagtgccagatgttcgcttcctcattccagtaatcaat
ggcctggagaagaacgaggtgatccaggctctacccaaactcatcaaactcaatcctatt
gtggtgaaggaggtgttcaacagactgctgggcactcaacatagtgagggcagttcctcc
atatctccgctcactcctggagagctcctcatcgccttacacaacattgactcttccaag
tgtgacatgaagtcaatcatcaaagccactaacctgtgttttggggagaagaatgtgtac
acgtccgaggtgctggccgtggtgatgcagcagttgatggagcagacccctctccctata
ctgctgatgcgtacggtcatccagtccctcacgatgtaccctcgcctggctggtttcgtc
atgaacgttctagcccgactcatcctcaaacaggtgtggaaatatcctaaagtgtgggag
ggctttgtaaagtgctgccagcgcaccaaaccccagtcctacaacgttctcctccagctg
cctccaccacaactggctagtgtgtttgagcgctgcccggagatgagggagcccctccta
cagcacgttcactccttcacccctcaccaacaagcccacattccagtgtctataatggct
gttctggaggccaacagcaggaagccggaacctgaaccacaacctgaacttcatcatcca
gaaataatagaagagagagaggtgccagtaccaaagcatatatcaatgcctgcaccagta
tcacaagcagaacctccagccccgacaccggtagagtttactgaaccaccaccaccacaa
cagatccccaggagggaagaagtagaagaacccatggagcgggaagagacagaccatgct
gctctggaggtcacgtctgaagccgcatcacagcaggtggaggtgtctgaggaggcatca
cactccaactccatttcagagaagaccgatgaacccatggaagagtcggctgcgatgcct
gtggatgtggctgaccaacccaaagatgagtccgaggatgttgttccagaagcaggagaa
agcagtgtggactga

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