Sinocyclocheilus anshuiensis: 107681888
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Entry
107681888 CDS
T04917
Name
(RefSeq) symplekin-like
KO
K06100
symplekin
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03015
mRNA surveillance pathway
sanh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107681888
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107681888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sanh03021
]
107681888
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107681888
Transcription machinery [BR:
sanh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107681888
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
107681888
U7-dependent histone pre-mRNA processing factors
107681888
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
HEAT_MROH2B_C
GNC1_N
Adaptin_N
V-ATPase_H_C
Cohesin_HEAT
Rep_Org_C
Cnd1
Motif
Other DBs
NCBI-GeneID:
107681888
NCBI-ProteinID:
XP_016333742
UniProt:
A0A671RJX5
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MASGVGEQAHGSVASQFYSNEEETAVDMTTSEKVVDLLNQAALISTEEKLIVLKQVQELI
INKDPSLLDNFLDEIIAFQTDKSIEVRKFVIGFIEEACKRDSELLLRLIANLNMLMRDES
VNVVKKAILTLTQLYKVALQWLVRTKSVSDMQEACWDMMTQIKEDVLALLDSDNDGVRTH
AIKFTESLIITLSPRTPDSDTPKKQEGDISLDKIPKDHTYIRYDTLCEEGKLALEQLLKF
MVHPAISSINLTTALGSLATLARQRPMFMSEVVQAYETLHANLPPTLAKSQVSSVRKNLK
LHLVSVLKHPSSVDFQGQISTLLLDLGMSQSEITRCTPATVQPRKRLHHEPYVEGKRIKM
EASLVEDDEDKEEPAPVVTTKPSSSVGTQSAIDLTAEFLLPLLTPDNVANLVLISMVYLP
EVMPASFQATYTPVESAGTDAQIKHLARLMATQMTGAGLGPGLELCKARDEEVKEEYGGA
GESSSKDPLIIRKLSAVSLGQAISVVGAPAAYKSPITEEAPQIKKFPEPILPTTQPKAPG
ASGRKKVFKLADVVQPFSEAQIEKLTNMAIKRILQSEKVIAQSGMSHVRVKLLARLVTQF
EGGKKNDLLQFILEDMRGRSELAFSLLYHEYNEYLSQQPPSSLDSYEHCLYTLLSGLQEK
PEQRDGLFTKLVLEAPVITDSALEVIQRYCEDESRVYLGMSTLKELILKRPSRQYQYLNV
LLNLSSHEKEKVRSTALSFIKRMYEKEHLKDCIEKFALTYMQFLVHPNPPSLLFGAGEDT
EVAAPWTEETVRQCLYLYLSLLPLNHRLVHELAAVYTEAIADIKRSVLRVIEQPIRGMGM
SSPDLLLLVENCPKGAETLVTRCLHILTDKVPPSPELVERVRDLYHKRVPDVRFLIPVIN
GLEKNEVIQALPKLIKLNPIVVKEVFNRLLGTQHSEGSSSISPLTPGELLIALHNIDSSK
CDMKSIIKATNLCFGEKNVYTSEVLAVVMQQLMEQTPLPILLMRTVIQSLTMYPRLAGFV
MNVLARLILKQVWKYPKVWEGFVKCCQRTKPQSYNVLLQLPPPQLASVFERCPEMREPLL
QHVHSFTPHQQAHIPVSIMAVLEANSRKPEPEPQPELHHPEIIEEREVPVPKHISMPAPV
SQAEPPAPTPVEFTEPPPPQQIPRREEVEEPMEREETDHAALEVTSEAASQQVEVSEEAS
HSNSISEKTDEPMEESAAMPVDVADQPKDESEDVVPEAGESSVD
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggcgtgggagaacaagcacatggtagcgtggcctcccagttctacagcaat
gaggaagaaacagccgttgacatgaccactagcgagaaggtggtggacttgctaaaccag
gcggccctcatctctacagaggaaaagcttattgttctcaaacaggtgcaggagttgatt
atcaacaaggacccttcattgcttgataattttctggatgaaatcatcgcatttcagact
gataaatcaattgaggtgcgaaagtttgtcatcggattcattgaggaggcatgtaaaaga
gacagtgagctgcttctgaggctgattgccaacctgaacatgctgatgagagatgagagt
gtgaatgtggtgaaaaaggccattctgacgctcactcagctatacaaagtggctttacag
tggctggtgcgcactaagagtgtctcggacatgcaggaggcatgctgggatatgatgacc
cagataaaagaggatgttctggccttgctggattccgataacgatggagttcgcactcat
gccatcaaattcacagagtccctcatcatcacgctgtcaccacgtacacctgactctgac
acgcccaagaaacaggagggagacatcagcctggacaaaatccccaaagaccacacatat
attcgatatgacaccttatgtgaggagggtaagttggctctggagcagttgttaaagttt
atggtgcaccctgccatctccagcattaatctcaccactgcactgggatcactggccacg
ctggccagacagcggcccatgttcatgtctgaggtagtgcaggcctatgagacgctacat
gctaacctgcccccaactctggctaagtctcaagtgagcagtgtgcgcaagaacctgaag
ctgcacttggtctcggtgctgaagcaccccagcagcgtggacttccagggccagatttcc
actctgctgctggacctcggcatgtctcagagtgagatcacccgctgcacaccagccact
gtacagccccgtaagaggctccaccatgagccctacgttgagggcaagaggatcaagatg
gaggcctctctagtggaggatgatgaggataaagaagaaccagctccagtcgtcaccaca
aaaccatcctcctctgttggcacccaatcagccatcgatctcactgctgagttcctgttg
cctctgctgactccagacaatgtggccaacctggtgctcatcagtatggtttacctgcct
gaagtgatgccggcctctttccaagccacctacacacctgtagaatcagccggcactgat
gcccagataaaacacttagccaggctgatggccacacagatgactggggctggcctggga
ccagggctggagctgtgtaaggctcgagatgaagaggtgaaggaggaatatggtggagcg
ggtgagtccagctccaaagaccctctcatcatccgcaagctgtctgctgtgtccctgggt
caagccatctcagtggtgggggcgccagcagcctacaagagccctatcactgaagaggca
cctcagatcaagaagttcccagagcccatactgcccaccacacagcccaaagctcctggg
gccagtggcagaaaaaaagtgttcaaattggccgacgtggtgcagccattttcagaggct
cagattgagaaactcaccaacatggccatcaagcggatcctccaatcagaaaaggtcatt
gcacagagtgggatgtcccatgtccgtgtgaagctgcttgcacggttggtgacccagttt
gagggtgggaagaaaaatgacttgttgcagtttatcttggaggatatgcggggcagaagt
gagctggccttttctctgctgtaccacgagtacaatgaatacctgagtcagcagcccccc
agctctctggacagctatgagcactgtctgtacacactgctgtctggcctgcaggagaaa
cctgagcagagggatgggcttttcaccaagcttgtgttggaggctccagtcattacagac
tcagcactggaggtgattcaacgctactgtgaggacgagtcacgtgtttacctaggcatg
tccacattaaaggagctcatcctcaaacgcccatccagacagtaccagtacctcaatgtc
cttctgaacctcagctctcacgaaaaagaaaaggtgcgctccactgctctcagcttcatc
aagcgcatgtatgagaaggaacatctgaaggactgtattgagaagtttgctctcacctac
atgcagtttctggtccacccaaacccaccttctcttctgtttggagcaggagaggataca
gaggtggcagctccctggacagaggaaacggtgcggcagtgcctttacctctatctctcc
ctccttcccctcaaccatcgtctggtgcatgagctggctgctgtctacaccgaggccatc
gctgacatcaaacgcagtgtgctcagggtcatcgaacagcctataagaggaatgggaatg
agctctcctgacctgctgctcctggtggagaactgtcctaaaggagcagagacgctggtc
actcgctgtctgcatatactcactgataaagtgccgccatctcctgagctggtggagagg
gtgagggatctttatcataagcgagtgccagatgttcgcttcctcattccagtaatcaat
ggcctggagaagaacgaggtgatccaggctctacccaaactcatcaaactcaatcctatt
gtggtgaaggaggtgttcaacagactgctgggcactcaacatagtgagggcagttcctcc
atatctccgctcactcctggagagctcctcatcgccttacacaacattgactcttccaag
tgtgacatgaagtcaatcatcaaagccactaacctgtgttttggggagaagaatgtgtac
acgtccgaggtgctggccgtggtgatgcagcagttgatggagcagacccctctccctata
ctgctgatgcgtacggtcatccagtccctcacgatgtaccctcgcctggctggtttcgtc
atgaacgttctagcccgactcatcctcaaacaggtgtggaaatatcctaaagtgtgggag
ggctttgtaaagtgctgccagcgcaccaaaccccagtcctacaacgttctcctccagctg
cctccaccacaactggctagtgtgtttgagcgctgcccggagatgagggagcccctccta
cagcacgttcactccttcacccctcaccaacaagcccacattccagtgtctataatggct
gttctggaggccaacagcaggaagccggaacctgaaccacaacctgaacttcatcatcca
gaaataatagaagagagagaggtgccagtaccaaagcatatatcaatgcctgcaccagta
tcacaagcagaacctccagccccgacaccggtagagtttactgaaccaccaccaccacaa
cagatccccaggagggaagaagtagaagaacccatggagcgggaagagacagaccatgct
gctctggaggtcacgtctgaagccgcatcacagcaggtggaggtgtctgaggaggcatca
cactccaactccatttcagagaagaccgatgaacccatggaagagtcggctgcgatgcct
gtggatgtggctgaccaacccaaagatgagtccgaggatgttgttccagaagcaggagaa
agcagtgtggactga
DBGET
integrated database retrieval system